📣 Excited to co-organize this @embo.org Lecture Course - #AI driven approaches in structural biology 📅 26 April - 2 May 2026 in Bengalore (India). More info and registration below @pasteur.fr @cnrsbiologie.bsky.social meetings.embo.org/event/26-ai-...
25.02.2026 00:31 — 👍 15 🔁 6 💬 0 📌 0and for refining AF2 models for small molecules virtual screenings www.biorxiv.org/content/10.1...
03.02.2026 07:28 — 👍 2 🔁 0 💬 0 📌 0This work follows our previous exploration of AF2 distograms for generating accurate, atomistic ensembles of Intrinsically Disordered Proteins www.biorxiv.org/content/10.1...
03.02.2026 07:28 — 👍 1 🔁 0 💬 1 📌 0✨ New preprint by Nicolas Portal in collaboration with @vincentmallet.bsky.social 🚀 We incorporate AF2 distograms in #ML protein representations for prediction of ligand binding sites & affinity + protein stability + various RNA properties @pasteur.fr @erc.europa.eu www.biorxiv.org/content/10.6...
03.02.2026 07:28 — 👍 16 🔁 4 💬 1 📌 0Amazing opportunity!
28.11.2025 13:39 — 👍 6 🔁 0 💬 0 📌 0Don’t miss this opportunity to work with a fantastic mentor, a great team, in a beautiful city of France!
07.11.2025 12:47 — 👍 9 🔁 4 💬 0 📌 0
A new tutorial manuscript is out! 🚀 Making @plumed.org fly: a tutorial on optimizing performance, by Daniele Rapetti, @bonomimax.bsky.social @carlocamilloni.bsky.social @bussigio.bsky.social and Gareth Tribello. arxiv.org/abs/2511.02699
05.11.2025 08:16 — 👍 10 🔁 5 💬 1 📌 1See you in Toulouse for this exciting @cecamevents.bsky.social workshop! #cryoEM #cryoET #AI #modeling
01.11.2025 14:40 — 👍 7 🔁 0 💬 0 📌 0
Our work developing a maximum entropy reweighting method to refine all-atom ensembles of IDPs with extensive NMR and SAXS datasets is now out in @natcomms.nature.com:
rdcu.be/eKlK7
Led by @dartmouthchem.bsky.social graduate student Kaushilk Borthakur in collaboration with @bonomimax.bsky.social
Yep I think this also is feasible!
07.07.2025 16:15 — 👍 2 🔁 0 💬 0 📌 0Ahah I thought you were commenting on the other bioRxiv. My fault. In any case, the answer is yes!
07.07.2025 16:11 — 👍 1 🔁 0 💬 1 📌 0Yes, if some low res density is actually there. Same for semi-ordered waters, lipids or glycans 🎉
07.07.2025 16:05 — 👍 1 🔁 0 💬 3 📌 0
❄️ Even high-resolution #cryoEM maps can still hide a few secrets 🔍 Discover how we uncover them in this exciting collaboration with @egreene.bsky.social @fraserlab.com @pasteur.fr @cnrsbiologie.bsky.social
📄 Preprint: www.biorxiv.org/content/10.1...
Any sticker left for a colleague? 😜
23.06.2025 05:23 — 👍 1 🔁 0 💬 1 📌 0
🔧 Try it now with the dev version of @plumed.org
📂 Reproducibility: www.plumed-nest.org/eggs/25/014
📚 Tutorial (coming soon): www.plumed-tutorials.org
🚀 Super excited to share our new work, led by @vschnapka.bsky.social bAIes, a Bayesian framework for generating accurate atomic-resolution ensembles of IDPs using #AlphaFold info! Now on @biorxivpreprint.bsky.social → feedback welcome! @pasteur.fr @erc.europa.eu
www.biorxiv.org/content/10.1...
Exciting symposium coming soon in Grenoble!
27.05.2025 15:40 — 👍 8 🔁 1 💬 0 📌 0Our integrative approach using #MD and #cryoEM data to construct structural ensembles of #RNA just published on @natcomms.bsky.social doi.org/10.1038/s414... Lead by Elisa Posani, with @magistratolab.bsky.social @bonomimax.bsky.social @pjanos.bsky.social @navtejtoor.bsky.social and Daniel Haack 🎉
16.05.2025 09:16 — 👍 26 🔁 8 💬 0 📌 0
🧬PSB Symposium on " #MachineLearning in Cellular #StructuralBiology ", EPN Campus Grenoble, France, 26-27 June 2025🧬
📢Reminder - Call for abstracts (posters & short talks)
Submission & registration deadline 25 May: www.psb-grenoble.eu/psbsymposium...
@esrf.fr @embl.org @illneutrons.bsky.social
AlphaFold’s success builds on decades of tech advances, massive efforts to collect, curate, and share structural data, and rigorous benchmarking. What will it take to see a similar leap in structural ensemble prediction? @stephanieaw.bsky.social and I share some thoughts here 👇 Feedback is welcome!
07.05.2025 04:49 — 👍 22 🔁 5 💬 1 📌 0
Last session is about "Ethics and AI", with a fantastic lecture from Julie Allouche @pasteur.fr and Pierre Noro @pierrenoro.bsky.social @sciencespo.bsky.social
19.03.2025 10:07 — 👍 5 🔁 0 💬 0 📌 0
Next is technical challenges related to developing/using AI with Youssef Ghorbal and Thomas Menard
19.03.2025 09:21 — 👍 3 🔁 0 💬 1 📌 0
Last day of our "AI for Life Sciences" course @pasteuredu.bsky.social This morning we talk about Intellectual Property & AI with Nicolas Torno and Helene Chommy from DARRI @pasteur.fr
19.03.2025 08:31 — 👍 19 🔁 3 💬 1 📌 0
Final thematic session of our "AI for Life Sciences" is "AI in Neuroscience" with Jean-Baptiste Masson @pasteur.fr
@pasteuredu.bsky.social
It is now time for "AI in Structural Biology" with Guillaume Bouvier: AlphaFold and beyond! Short talks by @bardiauxb.bsky.social Ludovic Sauguet Vincent Schnapka and @duyvd.bsky.social @pasteur.fr @pasteuredu.bsky.social
18.03.2025 12:28 — 👍 19 🔁 6 💬 0 📌 0
AI for life sciences day 2 started!
@m-albert.bsky.social is now teaching AI for image analysis. Felipe Llinares from Bioptimus will then talk about LLMs, with short talks from @jkobject.com from my team and @emordret.bsky.social from @audeber.bsky.social team.
@pasteur.fr @pasteuredu.bsky.social
We are back with our "AI for life sciences" course @pasteur.fr @pasteuredu.bsky.social with a deep dive into Neural Networks with @vincentmallet.bsky.social
17.03.2025 12:36 — 👍 19 🔁 3 💬 0 📌 0
📢Here WE go!!! AI for life sciences course kicking off at @pasteur.fr with a lecture from @laineelodie.bsky.social.
Happy to see so many students on campus interested in AI!
@bonomimax.bsky.social @pasteuredu.bsky.social
If you are at @pasteur.fr today, come see @bussigio.bsky.social at 11AM in Salle Retrovirus. You won’t regret it #rna #cryoEM #coolscience @ipdbsc.bsky.social
05.03.2025 07:46 — 👍 12 🔁 3 💬 0 📌 0Looking forward!!!
05.03.2025 07:41 — 👍 2 🔁 0 💬 0 📌 0