Susan Holmes๐ŸŽฒ๐Ÿ–ฅ๏ธ๐Ÿงฌ's Avatar

Susan Holmes๐ŸŽฒ๐Ÿ–ฅ๏ธ๐Ÿงฌ

@sherlockpholmes.bsky.social

Statistician,Mother,Prof,Grandmother(she/her)๐Ÿ‡ซ๐Ÿ‡ท๐Ÿ‡ต๐Ÿ‡น๐Ÿ‡บ๐Ÿ‡ธ๐Ÿงช. ๐Ÿ–‹๏ธwith @wkhuber.bsky.social:Modern Statistics for Modern Biology (https://www.huber.embl.de/msmb/) #stats,#rstats.OSS,arXiv, microbial ecology,cytof,multi-omics,Bioconductor:phyloseq, DADA2

7,509 Followers  |  3,109 Following  |  151 Posts  |  Joined: 05.08.2023
Posts Following

Posts by Susan Holmes๐ŸŽฒ๐Ÿ–ฅ๏ธ๐Ÿงฌ (@sherlockpholmes.bsky.social)

๐ŸŽ‰ It's livestream day ๐ŸŽ‰

Join me at 1700 (CET; 1600 UCT) today for two hours of GAM goodness ๐Ÿคค

๐Ÿ“ฝ๏ธ Youtube: youtube.com/live/A9U8e1K...
Hit the Notify me ๐Ÿ”” to get a reminder when I go live

#RStats #mgcv #statistics #GAMs #DataScience ๐Ÿงช

03.03.2026 08:04 โ€” ๐Ÿ‘ 20    ๐Ÿ” 13    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image

@Eurostat published a #map showing accessibility to healthcare and education services in Europe:
link.europa.eu/TMxdbb
Explore the map: link.europa.eu/QWbyBX

#gis #cartography #gischat #demography @ec.europa.eu
@nosservicespublics.bsky.social

02.02.2026 18:59 โ€” ๐Ÿ‘ 24    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 3
The rules of the game: biophysical & molecular principles in cellular evolution Cells are the fundamental units of life, shaped by evolution into a remarkable diversity of forms and functions. Much is known about the roles of genes and proteins, the regulation of molecular proceโ€ฆ

Meeting alert! EMBO workshop about molecular and physical principles in evolution in Portugal, 2-5 June 2026. Deadline for registration is March 1st. Check out the website it should be a fun and informative workshop bridging evolutionary biology and physics of life meetings.embo.org/event/26-cel...

12.02.2026 13:37 โ€” ๐Ÿ‘ 17    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
What's new in the world of Generalized Additive Models YouTube video by Bottom of the Heap

๐Ÿšจ GAMs have moved onโ€”so itโ€™s time for an update.

On March 3, 2026 (17:00โ€“19:00 CET) Iโ€™ll be livestreaming an updated introduction to Generalized Additive Models in R

๐Ÿ“บ YouTube livestream link: youtube.com/live/A9U8e1K...

#RStats #mgcv #GAMs #gratia #statistics ๐Ÿงช

03.02.2026 12:57 โ€” ๐Ÿ‘ 106    ๐Ÿ” 47    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 1
A table. The columns are United States, Australia, France
The rows are:
Drinking while pregnant (Will Kill Baby, Don't Overdo It, Actively Good for You and Probably Baby)
Smoking while Pregnant (We're Arresting You Now, Don't Be Stupid, Eh, Don't Overdo It)
Exercising while Pregnant (Pretty Good for You, Great For You, Will Kill You and Baby)
Being Near a Cat While Pregnant (Wash Your Hands, Why is This On The List?, Most Dangerous Thing You Can Do)

A table. The columns are United States, Australia, France The rows are: Drinking while pregnant (Will Kill Baby, Don't Overdo It, Actively Good for You and Probably Baby) Smoking while Pregnant (We're Arresting You Now, Don't Be Stupid, Eh, Don't Overdo It) Exercising while Pregnant (Pretty Good for You, Great For You, Will Kill You and Baby) Being Near a Cat While Pregnant (Wash Your Hands, Why is This On The List?, Most Dangerous Thing You Can Do)

this @kjhealy.co banger came up in Facebook memories and it deserves to live here too

04.02.2026 01:00 โ€” ๐Ÿ‘ 55    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
Bioinformatician in Microbiome Research

๐ŸšจWe are hiring a Bioinformatician who will be embedded in our lab and work with members of the NCCR Microbiomes at ETH Zurich, as well as the Institute of Microbiology.๐Ÿšจ
nccr-microbiomes.ch
jobs.ethz.ch/job/view/JOP...

23.01.2026 14:31 โ€” ๐Ÿ‘ 20    ๐Ÿ” 12    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Eric, Statistician here, lovely post but I had trouble with: "the regression coefficients with ... for having the shingles vaccine were associated with significantly more inflammation and slower epigenetic aging. ...", seems to be there is "less" inflammation?

23.01.2026 07:55 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image

'A crucial innovation lay in the invention of โ€˜timelinesโ€™ (...) In 1765, the scientist-philosopher Joseph Priestley, best known for co-discovering oxygen, invented what was arguably the worldโ€™s first modern timeline.'

aeon.co/essays/when-...

17.01.2026 11:42 โ€” ๐Ÿ‘ 19    ๐Ÿ” 12    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
Comic. Standard 16-Part Epoxy. [Epoxy applicator with multiple labeled chambers in different colors: resin; hardener; filler, softener; rosin; stuff that bonds permanently to skin and nothing else; stuff that will turn white and crack over a few days, for decorative appearance; placebo; minced duct tape; acetone Fragrance; powdered bar magnets; polyethylvinylesteracetate; 2-polyethylvinylesteracetate; salt and pepper to taste; blood sample from the Gorilla Glue gorillas; stuff that bonds to every known material except yours]

Comic. Standard 16-Part Epoxy. [Epoxy applicator with multiple labeled chambers in different colors: resin; hardener; filler, softener; rosin; stuff that bonds permanently to skin and nothing else; stuff that will turn white and crack over a few days, for decorative appearance; placebo; minced duct tape; acetone Fragrance; powdered bar magnets; polyethylvinylesteracetate; 2-polyethylvinylesteracetate; salt and pepper to taste; blood sample from the Gorilla Glue gorillas; stuff that bonds to every known material except yours]

16-Part Epoxy

xkcd.com/3194/

15.01.2026 20:37 โ€” ๐Ÿ‘ 4631    ๐Ÿ” 761    ๐Ÿ’ฌ 39    ๐Ÿ“Œ 29
A hex sticker with a text that reads Hello Data Science with green, yellow and pink scatterplot points in the background. There is a web address www.hellodata.science

A hex sticker with a text that reads Hello Data Science with green, yellow and pink scatterplot points in the background. There is a web address www.hellodata.science

๐Ÿ“– Big news! We just released the first five chapters of our new book, Hello Data Science. It is a fully open-access resource written for beginners. Please help us spread the word! A few points about the book are below ๐Ÿ‘‡

๐Ÿ”— www.hellodata.science

#rstats #datascience #tidyverse

14.01.2026 05:34 โ€” ๐Ÿ‘ 195    ๐Ÿ” 81    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 2
Preparing JOSS for a generative AI future: From code to human creativity and design | Journal of Open Source Software Blog Blog for the Journal of Open Source Software โ€ข <a href='https://joss.theoj.org'>https://joss.theoj.org</a>

Rather applaud JOSS's revised approach to deal with AI-based submissions. blog.joss.theoj.org/2026/01/prep... , particularly with 'starting open' and at least 'six months developer history'. More of scholarly pub could benefit from such policies methinks.

05.01.2026 23:49 โ€” ๐Ÿ‘ 16    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
course schedule as a table. Available at the link in the post.

course schedule as a table. Available at the link in the post.

I'm teaching Statistical Rethinking again starting Jan 2026. This time with live lectures, divided into Beginner and Experienced sections. Will be a lot more work for me, but I hope much better for students.

I will record lectures & all will be found at this link: github.com/rmcelreath/s...

09.12.2025 13:58 โ€” ๐Ÿ‘ 659    ๐Ÿ” 235    ๐Ÿ’ฌ 12    ๐Ÿ“Œ 20

If you incorporate the differences from weekdays and weekends as well (using a Dirichlet prior) you get down to 16 for a 50-50 chance: seehttps://drive.google.com/file/d/1ShvK_gHZOwOmtrf7Yy2ogi38YQaQJz_O/view.

27.12.2025 02:04 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Photo featuring a large scale triangular shaped Christmas tree created with multicoloured crochet squares with a star on top, sited in an street at night

Photo featuring a large scale triangular shaped Christmas tree created with multicoloured crochet squares with a star on top, sited in an street at night

Crocheted Christmas tree, Medelim, Portugal, created by 50 female textile artists who came together from all over the country for the project #WomensArt #ChristmasEve ๐ŸŽ„ โ„๏ธ

24.12.2025 06:20 โ€” ๐Ÿ‘ 848    ๐Ÿ” 169    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 6
Preview
Size of Life From an amoeba to a blue whale

and the winner of the "2025 best thing on Internet" has just arrived
neal.fun/size-of-life/

@carlbergstrom.com

23.12.2025 16:07 โ€” ๐Ÿ‘ 138    ๐Ÿ” 56    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 6
Bayesian Data Analysis course - Aalto 2025 โ€“ Bayesian Data Analysis course

All the material for my Bayesian Data Analysis course is available online, including the lectures, which we re-recorded this fall (some of them by @aloctavodia.bsky.social and Noa Kallioinen while I was on vacation). The video links are listed in the schedule at avehtari.github.io/BDA_course_A...

11.12.2025 14:20 โ€” ๐Ÿ‘ 77    ๐Ÿ” 30    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
Easy Disappearing Nine Patch Quilt Pattern Disappearing nine-patch quilt patterns are easy to make in any size. Sometimes, you can even make other quilts with a disappearing method. Learn how.

I really like the disappearing nine quilts: www.thesprucecrafts.com/disappearing...

09.12.2025 01:01 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Photos of the 14 victims of the Montreal massacre:

Geneviรจve Bergeron, Hรฉlรจne Colgan, Nathalie Croteau, Barbara Daigneault, Anne-Marie Edward, Maud Haviernick, Barbara Klucznik-Widajewicz, Maryse Laganiรจre, Maryse Leclair, Anne-Marie Lemay, Sonia Pelletier, Michรจle Richard, Annie St-Arneault and Annie Turcotte

and the rooms where they were killed.

Photos of the 14 victims of the Montreal massacre: Geneviรจve Bergeron, Hรฉlรจne Colgan, Nathalie Croteau, Barbara Daigneault, Anne-Marie Edward, Maud Haviernick, Barbara Klucznik-Widajewicz, Maryse Laganiรจre, Maryse Leclair, Anne-Marie Lemay, Sonia Pelletier, Michรจle Richard, Annie St-Arneault and Annie Turcotte and the rooms where they were killed.

36 years ago today, 14 women, most of whom were studying engineering, were killed by an anti-feminist gun man at ร‰cole Polytechnique in Montreal. I was a young graduate student studying physics at the time and I will never forget. #MontrealMassacre #NeverForget ๐Ÿงช ๐Ÿ‘ฉโ€๐Ÿ”ฌ โš›๏ธ ๐ŸŽข #AcademicSky ๐Ÿ‡จ๐Ÿ‡ฆ

06.12.2025 19:03 โ€” ๐Ÿ‘ 575    ๐Ÿ” 250    ๐Ÿ’ฌ 11    ๐Ÿ“Œ 12

Excellent news:

02.12.2025 06:04 โ€” ๐Ÿ‘ 22    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Post image

What an amazing way to visualize early human migration. Lovely map by @HarvardCGA. A great colour scheme and an appropriate map projection! Source: buff.ly/3lbxonJ

30.11.2025 22:49 โ€” ๐Ÿ‘ 158    ๐Ÿ” 59    ๐Ÿ’ฌ 7    ๐Ÿ“Œ 7
I taught an octopus piano (It took 6 months)
YouTube video by Mattias Krantz I taught an octopus piano (It took 6 months)

I enjoyed this more than I expected to:

youtu.be/PcWnQ7fYzwI?...

30.11.2025 18:50 โ€” ๐Ÿ‘ 83    ๐Ÿ” 18    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 2
Post image

NOW OPEN!
CANSSI's postdoctoral fellowships offer a comprehensive research and training experience centred on statistical sciences.

Apply by January 16: https://loom.ly/GvcQVII
bsky.app/profile/sfu.ca | bsky.app/profile/pims.math.ca | amstatnews.bsky.social | nissorg.bsky.social

21.11.2025 16:54 โ€” ๐Ÿ‘ 2    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image

APPLY BY NOVEMBER 25!
Planning to do a #PhD in #statisticalsciences?
Come to a #Quebec university and you could get a supplement of $7,000 during the first two years.

Learn more: https://loom.ly/5Zegs20

21.11.2025 12:35 โ€” ๐Ÿ‘ 1    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
2007_horseshoes.pdf

Also very linked to doing multidimensional scaling where you don't care about centering, just the distances, maybe take a look at our old horseshoes paper where the gradient as a horseshoe is explained mathematically:
drive.google.com/file/d/1fd50...

20.11.2025 18:32 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
Researcher in Software Development for Large-Scale Mass Spectrometry Data Analysis (MetaRbolomics4Galaxy) Eurac Research ยท Bozen/Bolzano

๐Ÿ“ฃ join in my team ๐Ÿค—!

๐Ÿ‘‡
- #rstats software development
- contribute to @bioconductor.bsky.social and @galaxyproject.bsky.social
- large-scale #MassSpectrometry #metabolomics and #proteomics data analysis
- hiking โ›ฐ๏ธ

๐Ÿ“ Bolzano, ๐Ÿ‡ฎ๐Ÿ‡น
โฒ๏ธ 3 year position

๐Ÿ”— full description: bit.ly/4pyXi3V

please share

17.11.2025 07:23 โ€” ๐Ÿ‘ 8    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Wellcome LEAP spokesperson says thereโ€™s little debate that more research is needed.
Actually, we do query that viewpoint!

14.11.2025 12:33 โ€” ๐Ÿ‘ 14    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Congratulations, very nicely done, especially the table in Figure 3 (I am a visual learner)..

14.11.2025 13:22 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Valuable reporting here from @cathleenogrady.bsky.social for @science.org, adding context and other important voices to our perspective piece (linked further below, with @wiringthebrain.bsky.social and @deevybee.bsky.social)

www.science.org/content/arti...

14.11.2025 12:29 โ€” ๐Ÿ‘ 39    ๐Ÿ” 11    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2