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Daniel Vaulot

@daniel-vaulot.bsky.social

Biological oceanographer focusing on marine protists. Developing the PR2 databases for metabarcoding: https://pr2-database.org Emeritus at CNRS (SBR, Roscoff) and Guest Investigator at the University of Oslo (AQUA section, IBV). https://daniel-vaulot.fr

1,774 Followers  |  724 Following  |  92 Posts  |  Joined: 17.11.2023  |  1.8513

Latest posts by daniel-vaulot.bsky.social on Bluesky

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Rare microbial relict sheds light on an ancient eukaryotic supergroup - Nature The discovery of an unusual protist named Solarion arienae, which has a mitochondrial genome with some intriguing features, provides insight into the early radiation of eukaryotic groups.

Using PR2

www.nature.com/articles/s41...

23.11.2025 15:47 โ€” ๐Ÿ‘ 5    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Superb pictures...

14.11.2025 07:44 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Fantastic work done with a very large number of RCC strains.

03.11.2025 10:48 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Another piece of fascinating work done with RCC strains.

03.11.2025 10:49 โ€” ๐Ÿ‘ 2    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Superbe....

29.10.2025 19:10 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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We have added more than 900 new GenBank sequences to the RCC database that are linked to the web page of the corresponding strains.

29.10.2025 10:10 โ€” ๐Ÿ‘ 7    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

New version of PR2 that now includes the eKOI coi database recently published.

28.10.2025 09:11 โ€” ๐Ÿ‘ 2    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Primer database <div> <img src="pr2_logo.png" width="80"/> The PR2 primer database - v. 2.1.0 </div>

PR2 primers version 2.1.0 has been released. This does not include any new primer, but now the database uses the latest version of PR2 (5.1.1) to perform in silico analyses.
Access here: app.pr2-primers.org

28.10.2025 09:02 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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A novel taxonomic database for eukaryotic mitochondrial cytochrome oxidase subunit I gene (eKOI), with a focus on protists diversity Abstract. Metabarcoding has emerged as a robust method for assessing biodiversity patterns by retrieving environmental DNA directly from ecosystems. While

New publication: "A novel taxonomic database for eukaryotic mitochondrial cytochrome oxidase subunit I gene #eKOI, with a focus on #protists diversity" with Daniel Vaulot @daniel-vaulot.bsky.social from @biovitenskap.bsky.social
Published in Database by @oxfordacademic.bsky.social

20.10.2025 08:27 โ€” ๐Ÿ‘ 9    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Towards a trait-based framework for protist ecology and evolution Protists comprise the vast majority of eukaryotic genetic and functional diversity. While they have traditionally been difficult to study due to theirโ€ฆ

New publication: "Towards a trait-based framework for #protist ecology and evolution" with Daniel Vaulot @daniel-vaulot.bsky.social from @biovitenskap.bsky.social
Published in Trends in Microbiology @cp-trendsmicrobiol.bsky.social by @cellpress.bsky.social

20.10.2025 08:30 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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The lost art of scientific illustration:
from August Brauer's deep-sea fish

19.10.2025 08:59 โ€” ๐Ÿ‘ 6    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
MetaPR2

metaPR2 version 3.0 has just been released.

Here are the major changes:
- Metabarcodes (ASVs) are now annotated with the latest version of the PR2 reference sequence database (5.1.0).
- 8 new published datasets have been added from the Arctic and from the South West Pacific.

app.metapr2.org

06.10.2025 15:28 โ€” ๐Ÿ‘ 13    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

A paper just came out in Science about giant photosystem complex in Gephyrocapsa huxleyi RCC6660 www.science.org/doi/full/10....

15.09.2025 13:09 โ€” ๐Ÿ‘ 2    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
MARINNONET Project video
YouTube video by Juan Luis Gomez Pinchetti MARINNONET Project video

A new video from the MarinnoNET proejct to which RCC is a partner.

www.youtube.com/watch?v=xkD8...

15.09.2025 07:59 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I would never believe this would happen in a Canadian universityโ˜น๏ธ

26.08.2025 10:28 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Such statements undermine funding efforts for large scale oceanographic projects. I am sure Trump would lovet it...

08.08.2025 18:33 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

The following statement is utterly misleading "The cost of this venture pales in comparison to running a scientific research vessel, while yielding far more information..." A bunch of random measurements will never replace a carefully planned cruise with a very large number of metadata.

08.08.2025 18:33 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

It was so nice and so fulfilling to interact with you both...

30.07.2025 18:04 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Very nice led by Clarence and Adriana...

28.06.2025 14:42 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

ASM is so US centered... mostly American authors, a few European and no one else from South America, Africa or Asia... a real shame.

20.06.2025 18:15 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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We have contributed to a paper led by Kenneth Timmis on the murky world of predatory journals:

enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/...

20.06.2025 11:02 โ€” ๐Ÿ‘ 6    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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We have an A in house with a brillant master thesis defence of Sandra Irรฉn!!! First master student of the GEEK lab in Norway! ๐Ÿ˜ Thanks to @maritbjorbaekmo.bsky.social and Inger Skrede for a delightful & constructive discussion. #protists #proudadvisor ๐Ÿ”ฌ๐Ÿงฌ๐Ÿ‘ฉโ€๐Ÿ’ป @biovitenskap.bsky.social

09.06.2025 12:59 โ€” ๐Ÿ‘ 16    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Congratulations Puri... Is the speech available anywhere ?

05.06.2025 10:10 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Post image 02.06.2025 06:35 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Dose of Protist Art: Chatton's chapter 1952 "Classe des Dinoflagelles ou Pรฉridiniens" in Traitรฉ de Zoologie, Tome 1A. Fig. 1 Euglena intermedia; Fig. 2 Gyrodinium melo; Fig. 3 Amphidinium corpulentum; Fig. 4 Warnowia maculata; Fig. 5 radiolarian Auloceros elegans #protistsonsky

27.05.2025 07:26 โ€” ๐Ÿ‘ 46    ๐Ÿ” 4    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

Fantastic work led by Hie Lim, my office neighbour for 4 years in Singapore

16.05.2025 07:58 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Advances in Coccolithophore Research 2025 The Advances in Coccolithophore Research meeting aims to bring together international early career and established coccolithophore scientists. This is a hybrid meeting hosted at the MBA, Plymouth.

Join us @thembauk.bsky.social in Plymouth for the 4th edition of the Advances in Coccolithophore Research
๐ŸŒŠ ๐Ÿ”ฌ๐Ÿฆ ๐Ÿงช๐Ÿ“ˆ <Coccolithophore emoji>

โš ๏ธRegister Now: shorturl.at/ly1LT
#Coccolithophores #protistsonsky

Coccolithophore research on: Biogeochemistry, Cell Biology, Climate Change, Ecosystems

16.05.2025 01:18 โ€” ๐Ÿ‘ 20    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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The RCC is participating in the MALDIBANK project.

MALDIBANKโ€™s main goal is to conceptualize a global, cloud-based, open MALDI spectra databank in order to promote identification of microorganisms.

14.05.2025 09:53 โ€” ๐Ÿ‘ 6    ๐Ÿ” 3    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Spotlight on DSMZ: Germanyโ€™s Leading Microbial Culture Collection - United States Culture Collection Network USCCN Project Manager Dusti Gallagher and Steering Committee member Matthew Ryan (CABI) participated in the MICROBE project (The MICRObiome Biobanking (RI) Enabler) 2nd Annual Consortium Meeting held ...

usccn.org/spotlight-on...

09.05.2025 18:15 โ€” ๐Ÿ‘ 12    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Deep origin of eukaryotes outside Heimdallarchaeia within Asgardarchaeota - Nature Ancestral reconstruction together with molecular dating of the last Asgard archaea and eukaryote common ancestor suggest that eukaryotes arose from the fusion of a H2-consuming archaeal host and a H2-...

Deep origin of eukaryotes outside Heimdallarchaeia within Asgardarchaeota www.nature.com/articles/s41... #jcampubs

08.05.2025 13:40 โ€” ๐Ÿ‘ 17    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

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