mamp-ml: A deep learning approach to epitope immunogenicity in plants
Eukaryotes detect biomolecules through surface-localized receptors, key signaling components. A subset of receptors survey for pathogens, induce immunity, and restrict pathogen growth. Comparative gen...
#2025ISMPMI π£ In silico screening of PRR-epitope interactions is now possible!
Here, we developed mamp-ml to predict their immunogenic outcomes without structural context. Let's accelerate engineering plant receptors for robust resistance! ππ± Small π§΅
www.biorxiv.org/content/10.1...
15.07.2025 23:28 β π 77 π 41 π¬ 1 π 5
Check out our new preprint! I am at P-083 at IS-MPMI, drop by for a chat :)
13.07.2025 06:35 β π 2 π 1 π¬ 0 π 0
Bioinformatics, protein modeling, cryoEM, drug screening, function prediction. Daisuke Kihara, professor of Biol/CS, Purdue U. https://kiharalab.org/ YouTube: http://alturl.com/gxvah
Associate Professor at UGAs Complex Carbohydrate Research Center. Lead of the Plant Biopolymers Group. Plant biochemist, gardener, and cat enthusiast with a focus on plant cell wall biology.
Assistant Prof. @molbioau, interested in root nodule symbiosis, root development, plant hormones, transcriptomics
Researcher at Aarhus University
interested in plant-microbe interaction
PhD student at TSL, Norwich, studying MAPK signalling in Magnaporthe oryzae during infection related development.
Biologist, Post-Doc at LRSV_Toulouse. PhD at mpipz_cologne. Interested in #evoMPMI #proteins #interactomics #Marchantia || Views are my own
Plant cells and development, Plant-microbe research, Phytophthora, oomycetes & symbiotic fungi, TAL effectors (TAL DNA binding code codiscoverer) and Coleoptera
Postdoc in the Garrido Oter lab @MPIPZ Cologne I PhD at Radutoiu lab @Aarhus University I interested in plant-microbe interactions, symbiosis, N2-fixing bacteria π±
International journal publishing high quality, original plant science research. Owned by the not-for-profit New Phytologist Foundation.
Leading international society-published journal with fast turnaround time, true peer review by top plant scientists, first-class post-acceptance science editing
https://academic.oup.com/plcell
Plant Physiology-international journal devoted to physiology, biochemistry, cellular and molecular bio, genetics, biophysics, and environmental bio of plants
https://academic.oup.com/plphys
Department of Molecular Biology and Genetics
Institut for Molekylærbiologi og Genetik
Aarhus University, Denmark
https://mbg.au.dk/en/
π»π³ PhD in plant science, particularly interested in plant-microbe interactions in relation to climate change.
Biologist @ The Sainsbury Lab; passionate about plant pathogens & evolution; open science advocate; loves travel, food and sports; nomad and hunter-gatherer. Web http://kamounlab.net | Medium https://medium.com/@kamounlab | GetGenome http://getgenome.net
Assistant professor at Aarhus University - Plant microbe interactions - Genomics & Genetics