Ming Tommy Tang's Avatar

Ming Tommy Tang

@tommytang.bsky.social

Director of bioinformatics at AstraZeneca. subscribe to my youtube channel @chatomics. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership. tommytang.bio.link

4,128 Followers  |  1,362 Following  |  8,768 Posts  |  Joined: 10.09.2023  |  1.8729

Latest posts by tommytang.bsky.social on Bluesky

Because responsibility isn't about waiting until you're strong enoughβ€”it's about doing what you can, right now.

Kids don't need to be shielded from effort. They need to be invited into it.

The weight builds more than muscle. It builds character. #lifelesson

06.12.2025 00:58 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Watching my son struggle with that water bottle, I realized he's learning the same lesson.

Not because the task is easy, but because it needs doing. Because he's part of this family.

06.12.2025 00:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

One in each hand. Twenty trips back and forth.

Was I tired? Absolutely.

Was I proud when we finished? Absolutely.

That's when I learned: contribution matters more than capability.

06.12.2025 00:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

I stood there, surprised. That bottle is heavy. But he was moving it. He was doing it.

It took me back 35 years.

I was 4, helping my parents move coal briquettesβ€”200 of them. No electric stove, no gas. A truck would dump them, and we'd haul them to our yard.

06.12.2025 00:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

My 7-year-old son was already halfway up the stairsβ€”sliding, pulling, dragging that heavy 5-gallon water bottle.

Two small arms straining. Determined little grunts. He got it to the top and wrestled it into place.

06.12.2025 00:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

The 5-Gallon Lesson in Responsibility

"Tommy, get me another bottle. Quick, no water!"

I was deep in work. "Wait a second..."

Still working. My wife, more urgent now.

Finally, I finished and headed to the garage. But I stopped in my tracks.

06.12.2025 00:58 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Preview
A multi-omics molecular landscape of 30 tissues in aging female rhesus macaques Nature Methods - This Resource provides a multi-omic tissue atlas of aging in nonhuman primates.

A multi-omics molecular landscape of 30 tissues in aging female rhesus macaques www.nature.com/articles/s4...

05.12.2025 15:15 β€” πŸ‘ 5    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Bash scripting quirks & safety tips
jvns.ca/blog/2017/0...

05.12.2025 14:45 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

10/
Key takeaways:
Easy install

Strong docs

Active maintenance

Fits your workflow

Test on your data

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

9/
Your data matters more than benchmarks.
What works on brain cells might fail on blood cells.
Always test on your data.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

8/
Controversial take:
Nature Methods β‰  usability.
I’ve seen β€œhigh-impact” tools die after publication with zero updates.

05.12.2025 14:15 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

7/
Pro tip: Tools from established labs are safer bets.
They’re maintained for years, not months.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

6/
Step 3: Workflow integration.
Does it work with Seurat or Scanpy?
Does it use standard formats?
Will it break your pipeline?

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

5/
True story: Found a β€œrevolutionary” scRNA-seq method.
Brilliant paper. Sparse docs. Maintainer gone.
We had to abandon it.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

4/
Step 2: Documentation check.
Good signs:
β€’ Clear tutorials
β€’ Active GitHub issues
β€’ Regular updates
Red flag: last commit 3+ years ago.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

3/
Step 1: Can I install it?
Perfect benchmarks mean nothing if the install fails.
Test in a clean environment before you commit.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

2/
New tools drop daily.
How do you pick one?
Here’s my real-world selection processβ€”using single-cell RNA-seq as the example.

05.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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1/ Why I sometimes ignore Nature Methods papers when picking bioinformatics tools.
A practical guide to choosing tools that actually work.

05.12.2025 14:15 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Just stay in your lane, keep moving, and trust your route.

Your winter is preparing you for your spring. #lifelesson

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

If you're toiling right nowβ€”in slow traffic, working long hours, building skills, paying duesβ€”you're not behind.

You're progressing. Every mile forward counts.
The harvest comes. The destination gets closer.

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Don't compare your winter with someone else's autumn.

Don't measure your building phase against someone else's harvest season.

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

The real question isn't "Why are they moving faster?"

It's "Am I moving toward MY destination?"

Progress isn't about speed. It's about direction.

We're in different seasons.

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

This moment reminded me of something crucial in our careers: we're all on different highways.

Some colleagues seem to race ahead while we inch forward. But they're heading toward different destinationsβ€”different goals, different life stages, different definitions of success.

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

I glanced at the opposite laneβ€”empty, fast-moving, cars speeding toward their destinations.

For a moment, I envied their speed.

Then it hit me: they're going somewhere completely different.

Their "fast" means nothing to my journey. Their road isn't mine.

05.12.2025 03:16 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

5 PM commute.

Already dark.

GPS says one hour home through crawling traffic.

05.12.2025 03:16 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Study 50K cancer transcriptomes through deep learning. data: figshare.com/articles/da...
paper www.biorxiv.org/content/10....

04.12.2025 15:15 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Preview
Chatomics! β€” The Bioinformatics Newsletter Why Subscribe?βœ… Curated by Tommy Tang, a Director of Bioinformatics with 100K+ followers across LinkedIn, X, and YouTubeβœ… No fluffβ€”just deep insights and working code examplesβœ… Trusted by grad students, postdocs, and biotech professionalsβœ… 100% free

I hope you've found this post helpful.

Follow me for more.

Subscribe to my FREE newsletter chatomics to learn bioinformatics divingintogeneticsandgenomics.ck.page/profile

04.12.2025 14:45 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Bioinformaticians are impatientπŸ‘‡
Conda is notorious slow...
then I found mamba github.com/mamba-org/m...,
then I found
pixi prefix.dev/blog/pixi_a... : Blazing fast cross-platform package management for teams.

By the creators of the mamba package manager. #bioinformatics

04.12.2025 14:45 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 1    πŸ“Œ 1
Preview
Chatomics! β€” The Bioinformatics Newsletter Why Subscribe?βœ… Curated by Tommy Tang, a Director of Bioinformatics with 100K+ followers across LinkedIn, X, and YouTubeβœ… No fluffβ€”just deep insights and working code examplesβœ… Trusted by grad students, postdocs, and biotech professionalsβœ… 100% free

I hope you've found this post helpful.

Follow me for more.

Subscribe to my FREE newsletter chatomics to learn bioinformatics divingintogeneticsandgenomics.ck.page/profile

04.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

14/
Action item:
Next time you analyze a dataset, pretend you’re a detective
Ask: What looks off? What doesn't add up?
The truth is in the noise.

04.12.2025 14:15 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

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