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Jason Yang

@jsunn-y.bsky.social

PhD Candidate @Caltech studying ML for protein engineering https://jsunn-y.github.io

257 Followers  |  414 Following  |  4 Posts  |  Joined: 16.11.2024
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Posts by Jason Yang (@jsunn-y.bsky.social)

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Steered generation for protein optimization: On datasets with ~10^2 measurements, steering a discrete diffusion model outperforms RL on a protein language model for generating improved variants.

@jsunn-y.bsky.social @francesarnold.bsky.social @yisongyue.bsky.social

arxiv.org/abs/2505.15093

22.05.2025 18:33 — šŸ‘ 27    šŸ” 4    šŸ’¬ 0    šŸ“Œ 0

Thank you to all of my co-authors: especially my co-lead, Ravi Lal, and advisors @yisongyue.bsky.social and @francesarnold.bsky.social!

16.01.2025 18:04 — šŸ‘ 0    šŸ” 0    šŸ’¬ 0    šŸ“Œ 0
x.com

Happy to share that our work on Active Learning-Assisted Directed Evolution is now published in @naturecomms.bsky.social!

Paper: www.nature.com/articles/s41...

Check out the original thread here: x.com/jsunn_y/stat...

16.01.2025 18:04 — šŸ‘ 15    šŸ” 3    šŸ’¬ 1    šŸ“Œ 0

Come visit our CARE benchmarks poster today at 11-2pm! (West Ballroom #5205)

13.12.2024 17:12 — šŸ‘ 4    šŸ” 1    šŸ’¬ 0    šŸ“Œ 0

I’m at NeurIPS this week presenting two of my recent projects!

Enzyme function classification (CARE) benchmarks: Friday 11-2pm West Ballroom #5205 @caltech.edu

Conditional generation from protein language models (ProCALM): Sunday at MLSB Workshop @Profluent

Please come say hi!

10.12.2024 20:24 — šŸ‘ 16    šŸ” 2    šŸ’¬ 0    šŸ“Œ 2