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Alex Brace

@alexbrace.bsky.social

Computer Science PhD Student at the University of Chicago. Genome-scale language models. AI steered molecular dynamics. AI4Science.

157 Followers  |  976 Following  |  1 Posts  |  Joined: 02.12.2024
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Posts by Alex Brace (@alexbrace.bsky.social)


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Built by CATH, TรœM and NVIDIA, ProFam-1 is our new open-source protein family language model (pfLM) designed to generate functional protein variants and predict fitness using in-context example sequences.

22.12.2025 14:32 โ€” ๐Ÿ‘ 11    ๐Ÿ” 5    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
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Nucleotide Transformer: building and evaluating robust foundation models for human genomics - Nature Methods Nucleotide Transformer is a series of genomics foundation models of different parameter sizes and training datasets that can be applied to various downstream tasks by fine-tuning.

๐Ÿงช๐Ÿงฌ๐Ÿ–ฅ๏ธ Nucleotide Transformer is now published in Nature Methods!

A foundational models for genomics, with up to 2.5 billion parameters, that are trained on genomes from 800+ species and 3000+ human individuals.

๐Ÿ“„ www.nature.com/articles/s41...
๐Ÿ’ป github.com/instadeepai/...

#Genomics #BioML #MLSky

05.12.2024 13:26 โ€” ๐Ÿ‘ 28    ๐Ÿ” 10    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 1

ls

02.12.2024 23:58 โ€” ๐Ÿ‘ 5    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0