Iddo Friedberg 🏴  Χ’Χ™Χ“Χ•'s Avatar

Iddo Friedberg 🏴 Χ’Χ™Χ“Χ•

@iddux.bsky.social

Curses back at dimensionality. High throughput, some output.

317 Followers  |  366 Following  |  376 Posts  |  Joined: 28.09.2023
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Posts by Iddo Friedberg 🏴 Χ’Χ™Χ“Χ• (@iddux.bsky.social)

"This phosphodiesterase from E. coli has presented us with a poser. We do not know which node on the EC tree it is on. But we will soon find out."

How Not to be Seen: Predicting Unseen Enzyme Functions using Contrastive Learning

www.biorxiv.org/content/10.6...

25.02.2026 17:42 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

I love curling.

curl -X POST -L -H "Content-Type: application/json" -H "Authorization: Bearer <token>" -d '{"key":"value"}' api.example.com/data -o response.json --verbose

21.02.2026 14:33 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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darth vader says i will deal with them myself in a dark room . ALT: darth vader says i will deal with them myself in a dark room .
18.02.2026 03:37 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

As a large language model, I recommend that you resist the temptation to open your response with β€œas a large language model…” in the rebuttal.

13.02.2026 21:06 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

LAN relationship

12.02.2026 19:34 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

The AI of wordle as a grant reviewer:

"This proposal isn’t one of the projects I think will be funded based on what I’ve learned from doing science".

12.02.2026 04:31 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Harmonizing the Data of your Data Extract crucial experimental metadata from scientific publications into sample data relation format files.

New @kaggle.com competition, which I am happy to co-host Can you extract the metadata of mass-spec experiments from scientific papers? Thanks to the NSF National Synthesis Center for Emergence in the Molecular and Cellular Sciences (NCEMS) for sponsoring. www.kaggle.com/competitions...

04.02.2026 02:58 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Philip Marlowe paying the fare to lady taxi driver: "Here toots, buy yourself a cigar'"

TD: If you can use me again sometime, call this number.

PM: Day and night?

TD: Night's better. I work during the day.

The Big Sleep 1946

31.01.2026 12:41 β€” πŸ‘ 23    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0
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In remembrance of Peer BorkΒ  | EMBL EMBL and its community are deeply saddened by the death of Peer Bork, the organisation’s Interim Director General.

very sad news. Peer Bork was one of the leaders of our field, a wonderful scientist, and he's much too young to be gone. www.embl.org/news/embl-an...

16.01.2026 18:33 β€” πŸ‘ 144    πŸ” 82    πŸ’¬ 10    πŸ“Œ 7
If you used to do this

*blurry logo of Windows 11*

And now you do this instead:

*clear as heck picture of Tux, the mascot of Linux*

You are making PROGRESS. (in green)

If you used to do this *blurry logo of Windows 11* And now you do this instead: *clear as heck picture of Tux, the mascot of Linux* You are making PROGRESS. (in green)

You made the right choice by opting for Linux and I am proud of you for that. πŸ₯Ή

16.01.2026 15:59 β€” πŸ‘ 40    πŸ” 3    πŸ’¬ 3    πŸ“Œ 0
Video thumbnail
06.01.2026 10:03 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Sayre's law - Wikipedia

"Academic politics is the most vicious and bitter form of politics, because the stakes are so low."

en.wikipedia.org/wiki/Sayre%2...

18.12.2025 05:42 β€” πŸ‘ 12    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Close your eyes
Have no fear
Third reviewer's gone
He's on the run and your daddy's her

17.12.2025 00:13 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Amos Bairoch, Swiss pioneer of bioinformatics, passes away We are deeply saddened to announce the passing of our co-founder and Group Leader Amos Bairoch. Emeritus professor at the University of Geneva, he shaped the development of bioinformatics over more th...

We are deeply saddened to share the passing of Amos Bairoch, pioneer of bioinformatics and co-founder of SIB. His lifelong commitment for high-quality, open data transformed global research. We honour his legacy by continuing to build the future of bioinformatics.

02.12.2025 08:24 β€” πŸ‘ 35    πŸ” 16    πŸ’¬ 4    πŸ“Œ 8
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ΧžΧœΧ›Χͺ Χ›Χœ Χ”ΧžΧ—ΧœΧ•Χͺ | Χ‘Χ™Χ“Χ”Χ¨Χͺא ΧžΧ•ΦΌΧ—ΦΆΧ¨Χ’'Χ™ - גם Χ’Χ•Χ‘Χ“ Χ‘Χ€Χ¨ בהוצאΧͺ גם Χ’Χ•Χ‘Χ“ - Χ”Χ›Χ¨Χ•Χ Χ™Χ§Χ” Χ©Χ”ΧžΧ—Χ‘Χ¨ ΧžΧ’Χ•ΧœΧœ ΧͺΧ—Χ™ΧœΧͺΧ” Χ‘Χ’Χ™ΧœΧ•Χ™Χ™Χ”ΦΈ Χ”ΧžΧͺוגדים הראשונים של ΧžΧ—ΧœΧͺ Χ”Χ‘Χ¨Χ˜ΧŸ ΧœΧ€Χ Χ™ ΧΧœΧ€Χ™ שנים. ΧžΧœΧ›Χͺ Χ›Χœ Χ”ΧžΧ—ΧœΧ•Χͺ מΧͺאר אΧͺ ΧžΧΧ‘Χ§Χ ההרואי של חוקרים ורו׀אים Χ‘ΧžΧΧ” הגשים לר׀א, ΧœΧ“Χ›Χ Χ•ΧœΧ Χ¦Χ— אΧͺ האויב Χ”...

ΧžΧœΧ›Χͺ Χ›Χœ Χ”ΧžΧ—ΧœΧ•Χͺ | Χ‘Χ™Χ“Χ”Χ¨Χͺא ΧžΧ•ΦΌΧ—ΦΆΧ¨Χ’'Χ™ - גם Χ’Χ•Χ‘Χ“ www.am-oved.co.il/%D7%9E%D7%9C...

02.12.2025 19:56 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Welcome! Definitely not too late!

02.12.2025 19:54 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Nuke it from orbit, it's the only way to be sure.

30.11.2025 04:24 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

My quote of the day

For every complex problem there is an answer that is clear, simple, and wrong.

H. L. Mencken

24.11.2025 11:41 β€” πŸ‘ 96    πŸ” 13    πŸ’¬ 1    πŸ“Œ 2
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Lonely Teardrops

open.spotify.com/track/2mAyOa...

22.11.2025 20:34 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Switch colors

22.11.2025 16:23 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
It's an artistic representation of a circulatory system walking through a kitchen, as drawn by Dave Gibbons and written about by Alan Moore.
It happens a lot 'round here.

It's an artistic representation of a circulatory system walking through a kitchen, as drawn by Dave Gibbons and written about by Alan Moore. It happens a lot 'round here.

Happy There Is A Circulatory System Walking Through The Kitchen Day to all who celebrate.

10.11.2025 10:54 β€” πŸ‘ 17925    πŸ” 6946    πŸ’¬ 122    πŸ“Œ 207

לא ראיΧͺΧ™ Χ’Χ“Χ™Χ™ΧŸ:

E.T.
ΧžΧœΧ—ΧžΧͺ הכוכבים (1977)
Χ‘Χ™Χ’
ברט ΧΧ“Χ¨Χ¨Χ™Χ™Χ˜Χ“ מ 1975: escape to witch mountain (Χ”Χ‘Χ¨Χ™Χ—Χ” ΧœΧ”Χ¨ Χ”Χ§Χ‘ΧžΧ™Χ)

08.11.2025 16:40 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Academics in Assyria in the 7th c BC complain that admin is preventing them from doing research and teaching

03.11.2025 10:04 β€” πŸ‘ 4446    πŸ” 1409    πŸ’¬ 53    πŸ“Œ 138
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How Pioneering Physicist Lise Meitner Discovered Nuclear Fission, Paved the Way for Women in Science, and Was Denied the Nobel Prize β€œScience makes people reach selflessly for truth and objectivity; it teaches people to accept reality, with wonder and admiration, not to mention the deep joy and awe that the natural order o…

Physicist Lise Meitner died on this day in 1968 just before her 90th birthday, having discovered fission, having been excluded from the Nobel Prize for her own discovery, and having paved the way for women in science anyway. This is her remarkable story: www.themarginalian.org/2016/10/27/l...

27.10.2025 19:05 β€” πŸ‘ 35    πŸ” 21    πŸ’¬ 0    πŸ“Œ 1
CAFA 6 Protein Function Prediction Predict the biological function of a protein

🧬The 6th Critical Assessment of protein Function Annotation #CAFA6 #CAFA is growing fast! We now have 295 participants! Join for the love of science🧬machine learning, and πŸ† πŸ’΅.

Please repost.

#BIOINFORMATICS #machinelearning

www.kaggle.com/competitions...

23.10.2025 14:13 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1
CAFA 6 Protein Function Prediction Predict the biological function of a protein

🧬The 6th Critical Assessment of protein Function Annotation #CAFA6 #CAFA is growing fast! We now have 295 participants! Join for the love of science🧬machine learning, and πŸ† πŸ’΅.

Please repost.

#BIOINFORMATICS #machinelearning

www.kaggle.com/competitions...

23.10.2025 14:13 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 1

I can't discuss the competition at this depth on social media by Kaggle rules. Only on the CAFA 6 discussion boards.

16.10.2025 19:58 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

πŸ“£ Competition Launch Alert! CAFA 6: Protein Function Prediction hosted by @iastateresearch.bsky.social

🎯 Predict protein function from amino acid sequences
πŸ’° $50,000 Prize Pool
⏰ Entry Deadline: Jan 26, 2026

16.10.2025 17:45 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0

1. Planet earth.

2. "Assigned functions": assigned GO terms with experimental evidence codes on Swissprot

16.10.2025 18:58 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
CAFA 6 Protein Function Prediction Predict the biological function of a protein

We just launched the 6th Critical Assessment of protein Function Annotation: CAFA 6 on @kaggle.com CAFA is an ongoing community-driven experiment designed to evaluate computational methods for protein function prediction.
www.kaggle.com/competitions...

16.10.2025 17:05 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 1    πŸ“Œ 2