Xavier Hernandez Alias's Avatar

Xavier Hernandez Alias

@xavierheal.bsky.social

💻Systems biology and ML, 🧬 regulatory genomics, divulgació Postdoc at Nedialkova lab @mpibiochem.bsky.social and @gagneurlab.bsky.social | @humboldt-foundation.de Fellow | EMBO Fellow | PhD @CRG.eu | Professor col·laborador @UOCuniversitat.bsky.social

178 Followers  |  374 Following  |  169 Posts  |  Joined: 18.11.2024  |  1.6663

Latest posts by xavierheal.bsky.social on Bluesky

Extremely vibrant and amazing science at the EMBO Fellows' meeting, thank you @embo.org for organizing! It is so exciting getting to know so many excellent scientists that share the same passion for research!!

01.07.2025 15:28 — 👍 8    🔁 0    💬 0    📌 0

Update of our protein outlier caller PROTRIDER. We now handle missing values, a widespread issue for mass spec where missing values are not a random -- and this improves outlier detection on non-missing data! Thumbs up to Daniela and George for the great work.
doi.org/10.1101/2025...

05.06.2025 04:44 — 👍 18    🔁 7    💬 0    📌 0

This year, the lab has a great representation at the #eshg2025: 3 talks, 2 posters, 1 spin-off stand ! 1/n

24.05.2025 10:08 — 👍 9    🔁 4    💬 1    📌 0
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What a fun and amazing experience to be this year at the other side of the stage @pintofscience.de! 🙈
Thank you for organizing and everyone for participating. I think it was the most exciting and also toughest Q&A session ever! 😊
@mpibiochem.bsky.social @gagneurlab.bsky.social

21.05.2025 06:27 — 👍 11    🔁 2    💬 0    📌 0
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Take you agendas for our next RNA club!
📅4th June 2025 15h
📍@www.helmholtz-munich.de
We will hear great talks from Patrick Schinke (@marsico-lab.bsky.social), Niklas Petzold (@sattler-lab.bsky.social), and Christoph Mueller-Hermes (Dueck's lab @tum.de). See you there!

20.05.2025 09:50 — 👍 1    🔁 1    💬 0    📌 1
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Amazing conference on the application of AI in RNA biology! With great science and and better scientists. Thrilling share and discuss such exciting topics and to be part of this emerging field! @gagneurlab.bsky.social @mpibiochem.bsky.social

08.05.2025 15:32 — 👍 4    🔁 1    💬 0    📌 0

I am very happy to participate in this year's @pintofscience.de!! I will be giving a talk on AI and biology May 20th at the Keg bar. Don't miss this and other events, tickets are out!
@gagneurlab.bsky.social
@mpibiochem.bsky.social
@tum.de

06.05.2025 21:21 — 👍 3    🔁 0    💬 1    📌 0

Join us for our next Kipoi Seminar with Laura Martens, Gagneur lab, TUM @lauradmartens.bsky.social @gagneurlab.bsky.social @tum.de
🐕scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution
📅Wed May 7, 5:30pm CET
🧬https://kipoi.org/seminar/
🦋kipoizoo.bsky

02.05.2025 11:01 — 👍 10    🔁 6    💬 0    📌 1
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Ready for 4 days full of talks and posters on RNA and AI, in the beautiful Ascona! #rnaai

04.05.2025 14:31 — 👍 2    🔁 0    💬 0    📌 0
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Sunsets from @mpibiochem.bsky.social 😍

20.03.2025 18:11 — 👍 3    🔁 0    💬 0    📌 0

On Wed., Pedro @pedrotomazdasilva.bsky.social talks about interpreting DNA Language models through nucleotide dependency analyses. Capturing functional interactions -maps like this one for an intron- and more: RNA structures, reg motifs,... preprint:
www.biorxiv.org/content/10.1...

03.02.2025 19:52 — 👍 25    🔁 5    💬 0    📌 0
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Join us in our next #MunichRNA19F!
📍 @mpibiochem.bsky.social
📅 19/02/2025

We will hear amazing talks from Shuyao Sha (@kusterlab.bsky.social), @lauradmartens.bsky.social (@gagneurlab.bsky.social), @michaelkugler.bsky.social (@hopfnerlab.bsky.social), Marc Schmitt-Supprian.

Don't miss it! 🧬😀

29.01.2025 12:00 — 👍 6    🔁 4    💬 0    📌 1
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🚨🚨🚨

If you're a bioinformatician who loves:

🧬 #SingleCell #LongReadSequencing & #AlternativeSplicing
🚀 Collaborating and travelling

Apply to work with us at the spectacular BIMSB (@mdc-berlin.bsky.social) in Berlin + @upf.edu-@crg.eu in Barcelona. Qs: www.transdevolab.com

Please RT! 🙏

23.12.2024 15:54 — 👍 25    🔁 28    💬 0    📌 1

Hey reg genomics folks, here is our little x-mas present: Flashzoi. Borzoi. Just as good. 3x faster. Thumbs up to @johahi.bsky.social for the great initiative, conception & implementation. Big thanks to Johannes Linder, David Kelley and colleagues to have created Borzoi and shared it freely.

23.12.2024 09:15 — 👍 18    🔁 7    💬 0    📌 0

Thanks Max!

20.12.2024 16:56 — 👍 0    🔁 0    💬 0    📌 0

Thank you @upf.edu @crg.eu for making my PhD journey so amazing! I am honored to have received the Extraordinary Award. And a special thanks to my PhD supervisors @martinschaefer.bsky.social and Luis Serrano.

Moltes gràcies!

20.12.2024 07:40 — 👍 7    🔁 0    💬 1    📌 0

Very happy to share our modeling of mRNA translation at the @SCB_iec Bioinformatics and Genomics!
@gagneurlab & Nedialkova lab @MPI_Biochem https://t.co/ie5HnWaBHQ

12.12.2024 12:24 — 👍 1    🔁 0    💬 0    📌 0

Tomorrow! 👇 https://t.co/HQ4G0Vx6Al

19.11.2024 09:54 — 👍 0    🔁 0    💬 0    📌 0

Beautiful sunsets from @MPI_Biochem 😍 https://t.co/PnjHhSmuBE

15.11.2024 16:09 — 👍 0    🔁 0    💬 0    📌 0

Ready for some days of exciting science @EESRNA! Looking forward to share our latest results from @MPI_Biochem @gagneurlab !! 😊 https://t.co/I9ORug4lK8

16.10.2024 07:00 — 👍 0    🔁 0    💬 0    📌 0

Don't miss the chance! Great lab and supervisor!⬇️ https://t.co/NhAXFDmyHK

12.10.2024 13:16 — 👍 0    🔁 0    💬 0    📌 0

Tomorrow! Happy to take part in this! 👇 https://t.co/hx8wmCnAEz

25.09.2024 18:33 — 👍 0    🔁 0    💬 0    📌 0

Looking forward to tonight! Happy to share my science in it!! 😊😍 https://t.co/N8bVSv0XrF

12.09.2024 15:13 — 👍 0    🔁 0    💬 0    📌 0

An extremely interesting work to take part in, and a great team effort! Exited to see how much DNA LMs can help understanding biology!! https://t.co/Jwi6VbnSDb

29.07.2024 07:46 — 👍 0    🔁 0    💬 0    📌 0

I am so happy to receive this award!! Thank you so much @UPFBarcelona
It is a great honour to share it with great colleagues from @CRGenomica 😍

And a special thanks to my great supervisors and mentors @lab_serrano @MartinHSchaefer for the exciting journey together! https://t.co/R7zTEJns9P

12.06.2024 13:36 — 👍 0    🔁 0    💬 0    📌 0

Thank you so much for this amazing meeting! It was so exciting to hear so many great talks on AI in genomics, and to share our science @gagneurlab! 😊😍 https://t.co/VcoUpjxAtT

07.06.2024 15:51 — 👍 0    🔁 0    💬 0    📌 0

☺️😀 https://t.co/xVrud02xZd

24.05.2024 09:19 — 👍 0    🔁 0    💬 0    📌 0

Enhorabona papa!! 😍
Quina il·lusió que em fa poder-te acompanyar en un dia com aquest! Una passió compartida pel @corpusdesitges , que des de ben petits ens has transmès i contagiat! 😊 https://t.co/0c8ODDM16J

15.05.2024 18:52 — 👍 0    🔁 0    💬 0    📌 0

One day into the #EMBOLabLead course, and already so many useful insights, reflective thoughts, and shared experiences. And much more to come in the following days! Thanks @EMBOFellows @LeadSculpt @LifeSciLearn https://t.co/RUnfgAUoBg

13.03.2024 06:25 — 👍 0    🔁 0    💬 0    📌 0

Sunset @MPI_Biochem 😍 https://t.co/zaINBLc1Sp

27.02.2024 16:41 — 👍 0    🔁 0    💬 0    📌 0

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