Fran Martรญnez-Jimรฉnez's Avatar

Fran Martรญnez-Jimรฉnez

@franmj88.bsky.social

Group Leader of Computational Immunogenomics group at VHIO | Data Mining lead at HartwigMedicalFoundation | Personal account | Advocate for social and environmental justice ๐ŸŒ https://www.franmartinezlab.com/

974 Followers  |  682 Following  |  13 Posts  |  Joined: 16.11.2024
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Posts by Fran Martรญnez-Jimรฉnez (@franmj88.bsky.social)

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Here's a short guide to good practices for #8M, that we've prepared from the Equality Commission of @vhio.bsky.social.

08.03.2026 12:37 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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2026-018-01 Postdoctoral fellow in cancer immunogenomics - VHIO Under the leadership of Josep Tabernero, VHIO is an internationally recognized cancer center. Its multidisciplinary, collaborative model drives scientific progress and innovative cancer treatments.

โ€ผ๏ธLast days to apply for our postdoc position in the group! Please share!!
jobs.vhio.net/en/jobs/7256...

05.03.2026 09:47 โ€” ๐Ÿ‘ 4    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Concurrent L1 retrotransposition events promote reciprocal translocations in human tumorigenesis LINE-1 (L1) retrotransposition generates somatic genomic variation in human cancer, but short-read sequencing has limited our understanding of its structural consequences and dynamics. Using long-read...

Today in
@science.org:
We are pleased to present our last work entitled:
"Concurrent L1 retrotransposition events promote reciprocal translocations in human tumorigenesis"
by Zumalave et al.
www.science.org/doi/10.1126/...

26.02.2026 19:08 โ€” ๐Ÿ‘ 40    ๐Ÿ” 27    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0
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Today is #WorldCancerDay

~1 in 5 people will develop #cancer in their lifetime

Each diagnosis affects not just one person, but families, communities, and futures

Grateful today for patients, clinicians, researchers & advocates - and to appreciate that progress depends on acting together

#WCD2026

04.02.2026 11:45 โ€” ๐Ÿ‘ 15    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Thanks Santi, very much appreciated!!

11.01.2026 18:52 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Convocatoria abierta para las Becas FERO 2026! ๐Ÿ”ฌdestinadas a impulsar la investigaciรณn oncolรณgica traslacional en Espaรฑa. 6 becas en 4 categorรญas diferentes
๐Ÿ‘‰ toda la info fero.org/para-investi...
#BecasFERO #ConvocatoriaAbierta #OpenCall #FundaciรณnFERO #FERO

09.01.2026 10:00 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Huge congratulations to Fran on being awarded the ERC Consolidator Grant! ๐ŸŽ‰

Such a well-deserved recognition of an outstanding trajectory and a truly creative, exciting proposal on T-cell clonal hematopoiesis.

Canโ€™t wait to see the discoveries that come out of this project.

So proud of you! ๐Ÿ‘โœจ

10.12.2025 09:19 โ€” ๐Ÿ‘ 9    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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๐Ÿ‘ ยกEnhorabuena Francisco Martรญnez Jimรฉnezโ€ผ๏ธ
El jefe del Grupo de Inmunogenรณmica Computacional del #VHIO ha recibido una Consolidator Grant del @erc.europa.euย para investigar nuevas estrategias de inmunoterapia basadas en clones expandidos de linfocitos T.

โžก๏ธ https://linke.to/ERCFranMVHIO_Cast
#ERCCoG

09.12.2025 11:41 โ€” ๐Ÿ‘ 9    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
Polyclonal origins of human premalignant colorectal lesions - Nature Nature - Polyclonal origins of human premalignant colorectal lesions

new out in Nature www.nature.com/articles/s41...

26.11.2025 17:27 โ€” ๐Ÿ‘ 8    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Epigenetically driven and early immune evasion in colorectal cancer evolution - Nature Genetics This study nominates immune escape as an early event in colorectal cancer and shows how this can be driven through both genetic and epigenetic changes.

New @natgenet.nature.com paper from the brilliant @eszterlakatos.bsky.social presents evidence that chromatin alterations disrupt antigen presentation & neoantigens in colorectal cancer. Also that immune escape is part of the "Big Bang", at the outset of CRC growth. www.nature.com/articles/s41...

05.11.2025 16:36 โ€” ๐Ÿ‘ 30    ๐Ÿ” 12    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 3

Fantastic #Blutorial by our friends and colleagues at the @batllelab.bsky.social . We are so happy to collaborate with them.

@meritxellnov.bsky.social and Mireia Novell in the lab have participated in this very important piece on metastatic colorectal cancer. ๐Ÿ‘๐Ÿผ๐Ÿ‘‡๐Ÿผ๐Ÿ‘‡๐Ÿผ๐Ÿ‘‡๐Ÿผ

aacrjournals.org/cancerdiscov...

23.10.2025 18:25 โ€” ๐Ÿ‘ 6    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Postdoc | VHIO, Barcelona
Immunotherapies succeed in only ~20% of cases.
Help us break resistance by engineering the right environment.
Join the Aging & Cancer Lab ๐ŸŒ
๐Ÿ‘‰ Apply: vhiovidaprogramme.eu/recruitment/ | mauslab.org

21.10.2025 09:34 โ€” ๐Ÿ‘ 4    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Finding somatic mutations in healthy tissue that can lead to cancer, at scale. Yet another path to primary prevention
www.nature.com/articles/s41...
www.nature.com/articles/d41...

08.10.2025 15:38 โ€” ๐Ÿ‘ 99    ๐Ÿ” 18    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

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As genomic profiling expands, such approaches are vital to balance patient benefit, cost, and sustainability. But will require systematic data generation and sharing to achieve real-world impact. End.

08.10.2025 06:06 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

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We also model the statistical power needed for clinical implementation of such biomarkers, offering a roadmap for translating non-response biomarkers into clinical practice. Our analysis revealed that we are still underpowered to implement it with existing data

08.10.2025 06:06 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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Under stringent analytical control, we found several known and novel biomarkers, many aligned with resistance mechanisms (e.g., KRASG12X in colorectal cancer treated with comb. chemotherapy agents, immune escape events in melanoma patients treated with ICIs). See full list in Supp. Tables

08.10.2025 06:06 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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We analyzed data from >2,500 patients with WGS/WTS and matched clinical outcomes โ€” the largest dataset of its kind โ€” to systematically identify non-response biomarkers.

08.10.2025 06:06 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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๐Ÿš€ Excited to share our preprint tackling a key gap in precision oncology: the lack of robust non-response biomarkers to guide clinical decisions.
These markers can spare patients from ineffective treatments and ease pressure on healthcare systems.
www.biorxiv.org/content/10.1...

08.10.2025 06:06 โ€” ๐Ÿ‘ 13    ๐Ÿ” 5    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Working alongside with Fran, a no brainer ๐Ÿ‘‡๐Ÿผ

07.10.2025 13:52 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Home - VIDA

๐Ÿšจ International Postdoctoral Positions Open at VHIO! ๐Ÿšจ
The VHIO VIDA Postdoctoral Program is now open!
Weโ€™re a fully funded position for international postdocs to work on cutting-edge exciting projects, develop professionally, and pave the way toward independence.
๐Ÿ‘‰ vhiovidaprogramme.eu

04.10.2025 07:32 โ€” ๐Ÿ‘ 4    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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How exercise promotes the immune system vs cancer, working through a gut bacteria metabolite
www.cell.com/cell/abstrac...

02.10.2025 18:55 โ€” ๐Ÿ‘ 221    ๐Ÿ” 70    ๐Ÿ’ฌ 6    ๐Ÿ“Œ 4
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End GDP mania: how the world should really measure prosperity The obsession with economic output as a measure of human development puts sustainability on the back burner. Researchers can now help to devise better indicators.

The obsession with economic output as a measure of human development puts sustainability on the back burner

Time to end the GDP mania

Our editorial inspired by a @nature.com paper that looks at how the world should really measure prosperity
๐Ÿงช #SGDs #doughnuteconomics
www.nature.com/articles/d41...

01.10.2025 20:57 โ€” ๐Ÿ‘ 21    ๐Ÿ” 9    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 1
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Doughnut of social and planetary boundaries monitors a world out of balance - Nature A revised โ€˜Doughnutโ€™ providing a visual assessment of trends in social deprivation and planetary degradation over the past two decades shows more than doubling of global GDP accompanied by accelerating ecological overshoot but only a modest reduction in human deprivation.

The richest 20% of nations, with 15% of the global population, contribute more than 40% of annual ecological overshoot; the poorest 40% of countries, with 42% of the global population, experience more than 60% of social shortfall ๐Ÿงช
A new analysis by Fanning & Raworth
www.nature.com/articles/s41...

01.10.2025 21:01 โ€” ๐Ÿ‘ 14    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Collateral mutagenesis funnels multiple sources of DNA damage into a ubiquitous mutational signature Mutations reflect the net effects of myriad types of damage, replication errors, and repair mechanisms, and thus are expected to differ across cell types with distinct exposures to mutagens, division ...

In these dark times, it comes as a rare pleasure to highlight @natanaels.bsky.social โ€ฌ & @marcdemanuel.bsky.social's work on germline and somatic mutations in humans. 1/n
www.biorxiv.org/cgi/content/...

02.09.2025 11:44 โ€” ๐Ÿ‘ 107    ๐Ÿ” 46    ๐Ÿ’ฌ 5    ๐Ÿ“Œ 2
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Aberrant basal cell clonal dynamics shape early lung carcinogenesis Preinvasive squamous lung lesions are precursors of lung squamous cell carcinoma (LUSC). The cellular events underlying lesion formation are unknown. Using a carcinogen-induced model of LUSC with no a...

www.science.org/doi/10.1126/...

19.07.2025 15:57 โ€” ๐Ÿ‘ 4    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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โ€˜Half the tree of lifeโ€™: ecologistsโ€™ horror as nature reserves are emptied of insects A new point in history has been reached, entomologists say, as climate-led speciesโ€™ collapse moves up the food chain even in supposedly protected regions free of pesticides

Experts are concerned, as a number of scientists ๐Ÿงชhave recorded huge die-offs of insects in nature reserves around the world. The reported collapse of insect populations in supposedly protected regions is part of a newer phenomenon. ๐ŸŒ๐Ÿœ

Read more in @theguardian.com:

14.07.2025 07:02 โ€” ๐Ÿ‘ 68    ๐Ÿ” 36    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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๐Ÿšจ You have until 13 July to submit your abstract for #EMBLCanGen ๐Ÿ‘‰ https://s.embl.org/can25-01-bl

๐Ÿ—“๏ธ 11 โ€“ 14 November 2025
๐Ÿ“ EMBL Heidelberg & Virtual

Join top scientists and academic clinicians for an inspiring event to connect, collaborate, and accelerate breakthroughs in cancer genomics ๐Ÿงฌ

03.07.2025 13:00 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

๐ŸšจChemo treatment upgrade!๐Ÿšจ

Check out our approach to modernise chemotherapy treatment published today in @natgenet.nature.com. From @cniostopcancer.bsky.social #TailorBio @cruk-ci.bsky.social www.nature.com/articles/s41... More details ๐Ÿ‘‡

23.06.2025 09:02 โ€” ๐Ÿ‘ 16    ๐Ÿ” 9    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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Los espejitos de colores de la captura de CO2: la mayor planta del mundo no cubre sus propias emisiones Una investigaciรณn periodรญstica ha revelado que la empresa suiza Climeworks, que desde el 2021 apuesta por la captura de CO2 del aire como โ€œsoluciรณn tecnolรณgicaโ€ a la crisis climรกtica, emite mรกs gases ...

Tranquis, la tecnologรญa nos salvarรก

www.elsaltodiario.com/cambio-clima...

21.06.2025 07:22 โ€” ๐Ÿ‘ 18    ๐Ÿ” 10    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 1

Powerful stuff from @juliosaezrod.bsky.social who found himself on the other end of the process - as a patient not a computational biology researcher - giving him insight into both research and patient perspectives. Huge credit to Julio for talking about his experiences here

20.06.2025 08:06 โ€” ๐Ÿ‘ 31    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0