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Ana Serra Silva

@anaserrasilva.bsky.social

Phylogeneticist and evolutionary biologist. Research fellow at UCL Biosciences | Communications Officer for @systassn.bsky.social

812 Followers  |  606 Following  |  99 Posts  |  Joined: 15.12.2023
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Posts by Ana Serra Silva (@anaserrasilva.bsky.social)

The omission of circular monstrosities is reason enough to add this to the ever growing list of 'new toys to try'.

28.02.2026 21:54 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Vessel tracking map for Globe40 regatta showing Cape Horn region.

Vessel tracking map for Globe40 regatta showing Cape Horn region.

If I ever drop off the map, this isn't a bad place to come looking. Weather permitting... β›΅

Do expect maniacal laughter, though.

To this day, I don't know if my skipper was more afraid of rough weather or my undisguised glee in said weather... (Beaufort up to 6/7, I do have some sense...)

28.02.2026 14:48 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Hmm, now I remember why I had stopped using Duoling (besides the gamified everything...). The bloody owl won't leave me alone! πŸ˜–

26.02.2026 21:00 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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LinneSys: Systematics Research Fund LinneSys: Systematics Research Fund The Councils of The Linnean Society of London and The Systematics Association jointly administer this fund for the benefit of systematics research. The Fund has …

The 2026 LinneSys call is open!

Looking for a small grant for systematics work? Check us out! systass.org/linnesys/

All you need is to be a member of the @systassn.bsky.social or the @linneansociety.bsky.social

Caveat, legally, we cannot fund anyone in a country listed here: tinyurl.com/wemwtfrz

16.02.2026 10:53 β€” πŸ‘ 14    πŸ” 18    πŸ’¬ 1    πŸ“Œ 1
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Something tells me you might enjoy this room. Well contents at least, from a curatorial point of view there might be plenty of silent screaming. (I know I had some with the fish and bird collections...)

Photo belongs to the Aquario Vasco da Gama, Dafundo PT

04.02.2026 10:23 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Indeed, they have. Rather baffling how our closing paragraphs were reintrepreted.

Thank you! It was quite interesting to see the results taking shape.

03.02.2026 23:02 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Ah, I might appreciate the quote more if some creationists hadn't latched on already....

03.02.2026 16:44 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

And thanks!

02.02.2026 17:18 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Not extensively but we did look at quartet scores in Astral and most interphylum scores were close to a 1:1:1 ratio.

02.02.2026 17:17 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Unrooted phylogenetic tree showing (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea)))

Unrooted phylogenetic tree showing (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea)))

TLDR: We found very weak support for the (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea))) tree. We do not know where the root of Spiralia goes. The spiralian phyla appeared in a very hard to resolve rapid radiation.

(7/7)

02.02.2026 17:03 β€” πŸ‘ 4    πŸ” 1    πŸ’¬ 1    πŸ“Œ 1
15-unrooted topologies showing Spiralian relationships with coloured barplots for the proportion of bootstrap and jackknife replicates supporting each unrooted tree.

15-unrooted topologies showing Spiralian relationships with coloured barplots for the proportion of bootstrap and jackknife replicates supporting each unrooted tree.

This still left the question of the internal spiralian relationships.

A combination of bootstrapping, jackknifing and simulations generally preferred one tree (Brachiopoda,Mollusca,(Annelida,(Platyhelminthes,Nemertea))).

BUT this tree was NOT significantly preferred over alternatives.

(6/7)

02.02.2026 17:03 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
Boxplots showing median per topology log-likelihoods. Top two plots show sloping distribution with all Platyhelminth-rooted topologies with the 15 top-scored topologies. Bottom two plots show all values near y = 0.

Boxplots showing median per topology log-likelihoods. Top two plots show sloping distribution with all Platyhelminth-rooted topologies with the 15 top-scored topologies. Bottom two plots show all values near y = 0.

This suggests an LBA involving Platyhelminthes that affects the position of the root. Simulation confirmed misspecified models favour a platyhelminth root.

(5/7)

02.02.2026 17:03 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

Under a site homogeneous LG model, taxon jackknife analyses strongly preferred trees rooted on Platyhelminthes. This preference was absent under a complex site-heterogeneous model.

(4/7)

02.02.2026 17:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
Scatterplots showing branch lengths of interest. Platyhelminthes branch always above y-axis break and interphylum branches are the cluster of points closest to y = 0.

Scatterplots showing branch lengths of interest. Platyhelminthes branch always above y-axis break and interphylum branches are the cluster of points closest to y = 0.

For all 15 possible trees, the internal branches (orange) were even shorter than the (maybe inexistent) Deuterostome branch.

The branch leading to Platyhelminthes was always considerably longer than branches leading to other phyla (blue).

(3/7)

02.02.2026 17:03 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
15 possible 5-taxon spiralian phylogenetic trees with list of publications supporting each tree

15 possible 5-taxon spiralian phylogenetic trees with list of publications supporting each tree

We restricted our sample of spiralian taxa to its five largest phyla (Annelida, Brachiopoda, Mollusca, Nemertea and Platyhelminthes).

We found published studies supporting all 15 possible trees connecting these groups.

(2/7)

02.02.2026 17:03 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0
Are interphylum spiralian relationships resolvable? The phyla making up the major animal clade of Spiralia have been clear since the advent of molecular phylogenetics; the relationships between these spiralian phyla have not. The lack of consensus over the relationships between these important animal phyla might be a clue implying their emergence in an explosive radiation. Focusing on the five largest spiralian phyla (Annelida, Brachiopoda, Mollusca, Nemertea and Platyhelminthes) and using two phylogenomic datasets, we have applied site-bootstrapping and taxon-jackknifing to explore this example of taxonomic instability. Analyses on the 105 possible rooted trees relating them showed that interphylum branches are very short. Preference for rooting Spiralia on Platyhelminthes is a long-branch artefact. Most analyses on the 15 unrooted trees showed a preference for the same topology but the support over other solutions was non significant. We conclude that the spiralian phyla emerged in rapid succession resulting in a difficult to resolve radiation. The deep history we infer for Spiralia has wide ranging implications for our interpretation of Cambrian fossils and for the evolution of traits such as biomineralization, segmentation and larvae. Impact Statement Analyses of two independent phylogenomic datasets suggest an explosive radiation at the origin of Spiralia, with implications for understanding the group’s evolutionary history. ### Competing Interest Statement The authors have declared no competing interest.

New paper on @biorxiv-evobio.bsky.social: Are interphylum spiralian relationships resolvable? doi.org/10.64898/202...

@maxjtelford.bsky.social and I tried answering this question with two independent phylogenomic datasets.

(1/7) πŸ§ͺ

02.02.2026 17:03 β€” πŸ‘ 11    πŸ” 9    πŸ’¬ 2    πŸ“Œ 0
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a dirt road going through a desert landscape with mountains in the background ALT: a dirt road going through a desert landscape with mountains in the background

If anyone spots a brain skittering about between Woburn Place and Gower St, please let me know.

I seem to have misplaced mine post lecture.

26.01.2026 16:58 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

As someone who used to be in charge of the spinnaker, I confess to some unhealthy curiosity of how the all-spinnaker rig would behave (wind angle constraints aside).

Add to that, are they all symmetric, asymmetric, a combination? πŸ€”

I do doubt that a single bowman would suffice...

14.01.2026 09:33 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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β€˜The Tree of Life’ Review: The Ancestor at the Root of It All Properly deciphering the branching pathways of evolution could unlock the history of every component of natural biology.

Lovely review by @adrianwoolfson.bsky.social of my book β€˜The Tree of Life’ in the Wall Street Journal today. Free guest link if you’re interested. www.wsj.com/arts-culture...

27.12.2025 09:17 β€” πŸ‘ 23    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0

Who? Us?! Never! πŸ˜‰

20.12.2025 11:45 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Interested in the @evojlinnsoc.bsky.social
special issue on phylogenomic discordance? tinyurl.com/v2eces3s πŸ§ͺ

One more summary added, just in time for some holiday travel chaos! β˜ƒοΈ

We'll return as more articles come live.

Again, all and any oversimplications are entirely my fault!

19.12.2025 13:02 β€” πŸ‘ 13    πŸ” 5    πŸ’¬ 0    πŸ“Œ 1
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Rapid divergence with gene flow creates intractable nodes in the tree of life: An empirical demonstration in the Buzzing Flowerpecker (Dicaeum hypoleucum) Abstract. The avian tree of life contains a series of famously intractable nodes and controversial relationships whose resolution varies between studies de

And now an empirical example: @devonderaad.bsky.social, @lhdecicco.bsky.social, @peterhosner.bsky.social and colleagues show how rapid divergence, gene-flow and stepping-stone island colonisation obscure phylogenetic relationships of buzzing flowerpeckers.

(8/n)

doi.org/10.1093/evol...

19.12.2025 12:59 β€” πŸ‘ 3    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Dang it! X-mas music has finally caught up with me. πŸ₯΄

18.12.2025 17:11 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Huh, apparently it's been nine years since I got these feathery 'office' mates.

Yes, this was a taxidermy room.

Yes, I used a marble topped 19th lab bench as a desk for over half a year.

No, I was not the person that bubble/plastic wrapped the albatross(es).

12.12.2025 17:50 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Word cloud visualization for 2025 showing your 50 most-used words, sized by frequency. Top 10: "support" (10Γ—), "model" (8Γ—), "deuterostome" (7Γ—), "heterogeneity" (7Γ—), "articles" (6Γ—), "deuterostomia" (6Γ—), "inference" (5Γ—), "variation" (5Γ—), "tree" (5Γ—), "trees" (4Γ—) (from Anisota's Annual Bluesky Harvest)

Word cloud visualization for 2025 showing your 50 most-used words, sized by frequency. Top 10: "support" (10Γ—), "model" (8Γ—), "deuterostome" (7Γ—), "heterogeneity" (7Γ—), "articles" (6Γ—), "deuterostomia" (6Γ—), "inference" (5Γ—), "variation" (5Γ—), "tree" (5Γ—), "trees" (4Γ—) (from Anisota's Annual Bluesky Harvest)

Can't say I'm surprised these were my most used words here. I do wonder if I should be worried... πŸ€”

It is slightly less odd than randomly shouting 'paedomorphy' half and hour after blanking on it during a lecture... 🦎(imagine this is a salamander)

From: anisota.net/harvest

05.12.2025 11:24 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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a man wearing a hat and ear muffs is making a face ALT: a man wearing a hat and ear muffs is making a face

I didn't have 'freeze at my desk' on my bingo card for today...

Especially when the office was nice and toasty yesterday...

26.11.2025 11:21 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Our website is back!!! πŸŽ‰πŸŽ‰πŸŽ‰

Also, if you have yet to register for this Wednesday's Joy of Discovery lecture (online at 3PM GMT+0), do so here: tinyurl.com/bdu5xans

Prof. Mike Benton, University of Bristol, will be giving a talk on the origin of feathers.

24.11.2025 13:23 β€” πŸ‘ 5    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
Poster with details about the Joy of Discovery event. Including title and abstract for Mike Benton's talk.

Poster with details about the Joy of Discovery event. Including title and abstract for Mike Benton's talk.

The online Joy of Discovery event is back! πŸŽ‰

This year the event is going to be a smidge different, with a single speaker. But what a speaker!

Prof. Mike Benton, University of Bristol, will be giving us a talk on the origin of feathers.

Join us NOV 26 AT 3PM GMT+0

REGISTER: tinyurl.com/bdu5xans

19.11.2025 15:07 β€” πŸ‘ 3    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0
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kermit the frog from the muppet show is standing in front of a red curtain ALT: kermit the frog from the muppet show is standing in front of a red curtain

I give up...

I send out an email with detailed instructions about 'how to do X'

Just over 24hrs before deadline, bunch of emails asking 'how do I do X?'

Read the MFing instructions!

I'm going back to my trees, at least when they piss me off it's not their fault.

11.11.2025 16:37 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Only wish this had been on the required reading list when I took molecular evolution as an undergrad... fairly sure that phylogenetics would have made a hell of a lot more sense (and I wouldn't have wasted time and money on MCATs, UKCATs and med schools applications...)

11.11.2025 14:10 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0