arXiv q-bio.GN Genomics

Debanjan Konar, Neerav Sreekumar, Richard Jiang, Vaneet Aggarwal: Alz-QNet: A Quantum Regression Network for Studying Alzheimer's Gene Interactions https://arxiv.org/abs/2508.04743 https://arxiv.org/pdf/2508.04743 https://arxiv.org/html/2508.04743

Nirjhor Datta, Swakkhar Shatabda, M Sohel Rahman: Embedding Is (Almost) All You Need: Retrieval-Augmented Inference for Generalizable Genomic Prediction Tasks https://arxiv.org/abs/2508.04757 https://arxiv.org/pdf/2508.04757 https://arxiv.org/html/2508.04757

Tianxiang Hu, Chenyi Zhou, Jiaxiang Liu, Jiongxin Wang, Ruizhe Chen, Haoxiang Xia, Gaoang Wang, Jian Wu, Zuozhu Liu: GRIT: Graph-Regularized Logit Refinement for Zero-shot Cell Type Annotation https://arxiv.org/abs/2508.04747 https://arxiv.org/pdf/2508.04747 https://arxiv.org/html/2508.04747

Ke Chen, Haohan Wang: Discovery of Disease Relationships via Transcriptomic Signature Analysis Powered by Agentic AI https://arxiv.org/abs/2508.04742 https://arxiv.org/pdf/2508.04742 https://arxiv.org/html/2508.04742

Shiyi Du, Litian Liang, Jiayi Li, Carl Kingsford: CodonMoE: DNA Language Models for mRNA Analyses https://arxiv.org/abs/2508.04739 https://arxiv.org/pdf/2508.04739 https://arxiv.org/html/2508.04739

[2025-08-08 Fri (UTC), 4 new articles found for q-bioGN Genomics]

[2025-08-07 Thu (UTC), no new articles found for q-bioGN Genomics]

Bhavesh Neekhra, Debayan Gupta, Partha Pratim Chakravarti: On the (In)Significance of Feature Selection in High-Dimensional Datasets https://arxiv.org/abs/2508.03593 https://arxiv.org/pdf/2508.03593 https://arxiv.org/html/2508.03593

Vinil Polepalli: A Novel cVAE-Augmented Deep Learning Framework for Pan-Cancer RNA-Seq Classification https://arxiv.org/abs/2508.02743 https://arxiv.org/pdf/2508.02743 https://arxiv.org/html/2508.02743

[2025-08-06 Wed (UTC), 1 new article found for q-bioGN Genomics]

Shanshan Ren, Thomas E. Bartlett, Lina Gerontogianni, Swati Chandna: A Bayesian approach to model uncertainty in single-cell genomic data https://arxiv.org/abs/2508.02061 https://arxiv.org/pdf/2508.02061 https://arxiv.org/html/2508.02061

Gindra, Palla, Nguyen, Wagner, Tran, Theis, Saur, Crawford, Peng: A Large-Scale Benchmark of Cross-Modal Learning for Histology and Gene Expression in Spatial Transcriptomics https://arxiv.org/abs/2508.01490 https://arxiv.org/pdf/2508.01490 https://arxiv.org/html/2508.01490

[2025-08-05 Tue (UTC), 2 new articles found for q-bioGN Genomics]

[2025-08-04 Mon (UTC), no new articles found for q-bioGN Genomics]

Kaitao Lai: CARTEpigenoQC: A Quality Control Toolkit for CAR-T Single-Cell Epigenomic Data https://arxiv.org/abs/2507.23048 https://arxiv.org/pdf/2507.23048 https://arxiv.org/html/2507.23048

[2025-08-01 Fri (UTC), 1 new article found for q-bioGN Genomics]

[2025-07-31 Thu (UTC), no new articles found for q-bioGN Genomics]

Lin, Sun, Guo, Yang, Wang, Hu, Ye, Yang, Zhong, Zhang, Liu: EnTao-GPM: DNA Foundation Model for Predicting the Germline Pathogenic Mutations https://arxiv.org/abs/2507.21706 https://arxiv.org/pdf/2507.21706 https://arxiv.org/html/2507.21706

[2025-07-30 Wed (UTC), 1 new article found for q-bioGN Genomics]

Haoyang Liu, Yijiang Li, Haohan Wang: GenoMAS: A Multi-Agent Framework for Scientific Discovery via Code-Driven Gene Expression Analysis https://arxiv.org/abs/2507.21035 https://arxiv.org/pdf/2507.21035 https://arxiv.org/html/2507.21035

Chenxin Jiang, Changhu Wang, Jingyi Jessica Li: Nullstrap-DE: A General Framework for Calibrating FDR and Preserving Power in DE Methods, with Applications to DESeq2 and edgeR https://arxiv.org/abs/2507.20598 https://arxiv.org/pdf/2507.20598 https://arxiv.org/html/2507.20598

Ramos, Hussein, Abdel-Hafiz, Sarkar, Liu, Kechris, Bowler, Lange, Banaei-Kashani: BioNeuralNet: A Graph Neural Network based Multi-Omics Network Data Analysis Tool https://arxiv.org/abs/2507.20440 https://arxiv.org/pdf/2507.20440 https://arxiv.org/html/2507.20440

[2025-07-29 Tue (UTC), no new articles found for q-bioGN Genomics]

[2025-07-28 Mon (UTC), no new articles found for q-bioGN Genomics]

[2025-07-25 Fri (UTC), no new articles found for q-bioGN Genomics]

Refahi, Hearne, Muller, Lynch, Sokhansanj, Brown, Rosen: Fast and Scalable Gene Embedding Search: A Comparative Study of FAISS and ScaNN https://arxiv.org/abs/2507.16978 https://arxiv.org/pdf/2507.16978 https://arxiv.org/html/2507.16978

[2025-07-24 Thu (UTC), 1 new article found for q-bioGN Genomics]

[2025-07-23 Wed (UTC), no new articles found for q-bioGN Genomics]

[2025-07-22 Tue (UTC), no new articles found for q-bioGN Genomics]

[2025-07-21 Mon (UTC), no new articles found for q-bioGN Genomics]