Peter Innes

Thanks nature news for featuring our recent preprint on 𝘐𝘯𝘤𝘦𝘯𝘥𝘪𝘢𝘮𝘰𝘦𝘣𝘢 led by @hbrappap.bsky.social

(check out preprint here: doi.org/10.1101/2025...) #protistsonsky

🌻 Sharing this preprint where we assembled 3 new chromosome-level genomes, including the first for Asteraceae's South American sister Calyceraceae! Asteraceae uses all the tricks when it comes to being the most ecologically successful family of flowering plants. www.biorxiv.org/content/10.1...

Excited to share our review on alternative splicing evolution, with @peterinnes1.bsky.social and Nolan Kane!

Evolution and potential contributions of alternative splicing (AS) along the speciation continuum.

Evolutionary #genetics of alternative splicing in plants

#TansleyInsight by @peterinnes1.bsky.social, Nolan C. Kane and @chriscrsmith.bsky.social

nph.onlinelibrary.wiley.com/doi/10.1111/...

#PlantScience #speciation

Thanks to @chriscrsmith.bsky.social for the invitation to write this Tansley Insight together! First pub in one of my favorite journals @newphyt.bsky.social 🌱 🥹

Proud of the latest edition of my free intro biostats book.

gitrepo: github.com/ybrandvain/b...
book: ybrandvain.github.io/biostats/

Not complete but at a good point to take a break, and I think its quite usable

dm me with comments , ideas etc

@ecoevorxiv.bsky.social Excited to read this review, “Genomic insights into the origin of ecotypes”, by Johannesson et al ecoevorxiv.org/repository/v...

Check out our new preprint! This was such a great paper to work on with @stairwaytokevin.bsky.social and the rest of the team!

Plant genome sequencing needs to go tropical Nature Reviews Biodiversity - Whole-genome plant sequencing is heavily biased towards species from temperate regions and species with utilitarian values. An expansion of efforts to include tropical...

Plant genome sequencing needs to go tropical. Check out this commentary I wrote with Felipe Zapata (UCLA) and María José Sanín (Montgomery Botanical Center) out today in Nature Reviews Biodiversity 1/5 www.nature.com/articles/s44...

Research Assistant/Technician 3 Staff - Non Union Job Category Non Union Technicians and Research Assistants Job Profile Non Union Salaried - Research Assistant /Technician 3 Job Title Research Assistant/Technician 3 Department Rese...

The Todesco lab at MSL UBC is looking for a Research Tech to help us run the lab and do fancy science! Good wet lab skills and enthusiasm for plant research are required, experience with genomics and bioinformatics is a plus. See ad below, please spread the voice! 🧬🌻🧪🌱🔬🧫
tinyurl.com/5bnfyadw

Hello bluesky community!

I'm hiring a postdoc to do machine learning in population genetics.
Starting to build up a lab at Indiana University Bloomington where I just started a faculty position.
Apply with the below link: indiana.peopleadmin.com/postings/30325

Big news! We are recruiting a postdoc to work on tomatillo evolution: jobs.colorado.edu/jobs/JobDeta.... The clade containing tomatillos and its allies (ca 300 spp) has evolved lantern fruits at least 25 times - we want to know why! Join us @rociodeanna.bsky.social & @caschenck-bio.bsky.social

The final version of our paper on the evolution of supergenes and mechanisms underlying distyly in Linum is now up at New Phytologist doi.org/10.1111/nph....

maybe my favorite paper I've written, I have a synthesis out today early access in @asn-amnat.bsky.social today that attempts to answer a simple but slippery question: what is an elevational range? doi.org/10.1086/737130

In case you couldn't bear to read all the way to the end (understandable), here is the proposed picture for the BIO Directorate.

NSF, NASA and NIH budgets per year, inflation adjusted from 2000-2025 along with the proposed cuts. NSF includes research component only. Massive cuts across all sectors, well below support spanning 25 years.

How bad will it be? Catastrophic.

Proposed cuts to #NSF, #NIH, and #NASA will set the US R&D landscape back 25 yrs+, cause economic and job loss now, and undermine innovations to come.

But, this is the WH's *proposed* budget.

Speak up now before it is too late.

(inflation adjusted $-s below)

Five petal blue flower with large white anthers

Nine years ago today 🌿

Linum lewisii, our Lewis Flax, blooming on the Mesa Trail #nativeplants

‘De-extinction’ isn’t real, but the conservation questions it raises are - High Country News In the age of gene editing, what does it mean to protect a species?

Great writing from @elinck.bsky.social touching on the biological, philosophical, and legal questions surrounding “de-extinction” and the Endangered Species Act www.hcn.org/articles/de-...

Upset about federal funding cuts in the US? Want some ideas of what to do? I wrote a long-ish blog post about it here
ecoevoevoeco.blogspot.com
summarizing things I learned meeting with Senate & House aides this week with the @aibsbiology.bsky.social Congressional Visits Day event.

Visual abstract: “we test hypotheses about floral diversity with community science data and an advanced computer vision model. Red/orange flowers have delayed flowering that matches hummingbird migratory patterns”

Hot off the presses and so so thrilled. Thanks to @inaturalist.bsky.social + computer vision we found something beautifully simple: Red and orange flowers bloom later than all the other colors in the eastern United States. Paper here: authors.elsevier.com/a/1kwzh3QW8S...

Sunflower ‘virgin births’ enable accelerated crop breeding The discovery that sunflower seeds can develop without fertilization reveals a pathway to accelerate improvement of this crop — and potentially others.

Oh, but fortunately there is this handy News and Views that makes everything clear! 🌻🫄 @ubcbotany.bsky.social
rdcu.be/ef9aW

Electrician for the server farms 🤖

Some additional #NSF thoughts. As always, these thoughts are mine alone. But here goes, It seems the damage this situation has already caused to the research enterprise in the US may be catastrophic (and irreparable?).

The evolution of heteromorphic sex chromosomes in plants Ancient heteromorphic sex chromosomes are common in mammals, but not in plants. Sex chromosomes in the plant family Cannabaceae, which includes species like hops and hemp, were identified a century ag...

It's been a busy year! The second thing I'd like to share is our is our pre-print on the evolution of the exquisitely cool Cannabaceae sex chromosomes!

www.biorxiv.org/content/10.1...

King tide today making sea foam like little clouds 🌊 ☁️ ☁️ ☁️

Inversions contribute disproportionately to parallel genomic divergence in dune sunflowers - Nature Ecology & Evolution Analysis of habitat data, quantitative trait locus mapping of seed size and selective sweeps show parallel selection acting on inversions in two independent dune ecotypes of the prairie sunflower, Hel...

Excited to see this paper out! www.nature.com/articles/s41...

Orange five-petal flowers with dark red centers and five orange anthers

Linum puberulum, our Plains Flax, blooming at Pawnee Buttes #nativeplants

#FallBackFlowers #FallBack to June 2 🌿

a cluster of Lewis Flax growing together in a large sagebrush field with a snow covered mountain in the background and a clear sky. The Flax flowers have five petals each with a small yellow center.

Where sky meets sage & snow still blankets mountains. And the Sun, our beautiful local star, fuels cycles of wildflowers from season to season, from seed to bloom. While the ground is swept with frost this morning, six months past & six months future, Prairie Flax blossom.

#FallBackFlowers 4 Jun 24