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@incsteps.bsky.social

4 Followers  |  14 Following  |  11 Posts  |  Joined: 11.06.2025  |  1.5308

Latest posts by incsteps.bsky.social on Bluesky

Just published #nomad 0.4.0-edge2 plugin version for #nextflow version 25.10.0 πŸš€πŸš€

Due some breaking internal changes in nextflow, πŸ₯΄, we'll maintain 2 diferent train releases

0.3.x will be compatible with nextflow 24.x

0.4.x will be compatible with nextflow >25.10.0

26.10.2025 17:13 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Writing (and publishing) a Nextflow Plugin

Are you curious about how complex it is to write a #nextflow plugin?

Do you realize using plugins your code can be reused and versioning across all your pipelines?

These three posts cover the basics of getting started, creating, testing and publishing functions

jorge-aguilera.blog/blog/2025/wr...

01.10.2025 10:48 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
nf-csvext

new "nf-csvext" #nextflow (proof of concept) plugin started

Why to create processes and execute csvtk or similar to manipulate #csv files

do it natively with nf-csvext:

- concat 2 csv
- lefJoin
- rightJoin
- clean

read more at (and please let us know your thoughts)

incsteps.github.io/nf-csvext/

17.09.2025 07:51 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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chatting with your #nextflow pipeline using nf-llm (proof of concept)

16.09.2025 13:26 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Post image Post image

Thrilled to share a positive update on the nf-aspera plugin for downloading files using #Aspera with #Nextflow.

Development is progressing really well, and we're aiming to have the first version ready by the end of this week.

Stay tuned for the official release! πŸš€

14.09.2025 18:15 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

Debugging #nextflow plugins

jorge-aguilera.blog/blog/2025/de...

04.09.2025 05:37 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

A new post in the blog about how to use nf-parquet in #nextflow with a simple benchmark to compare #parquet vs #csv

jorge-aguilera.blog/blog/2025/ne...

12.08.2025 08:49 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Do you use CSV in your #nextflow pipelines? If yes, how big they are?

1️⃣ nop
2️⃣ yep, a few records (<300)
3️⃣ of course, 1000+ records

πŸ“Š Show results

11.08.2025 09:31 β€” πŸ‘ 1    πŸ” 1    πŸ’¬ 1    πŸ“Œ 1
Deploying a Nomad cluster with Terraform and Oracle for Nextflow

Deploying a Nomad cluster with Terraform and Oracle for Nextflow

A short post explaining how to create a private cluster in a few minutes to run Nextflow pipelines

jorge-aguilera.blog/blog/2025/no...

24.07.2025 08:44 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Preview
Welcome The aim of this site On this site, you will find comprehensive information about Nextflow plugins, including details about their release dates and the number of downloads for each.

W've refactor the #nextflow plugins stats site and now it's under Incremental Steps domain.
It is not only a new look&feel against the EDN version but also it includes new features as for example ... you can comment on it (using github discussion integration)!!!!

incsteps.github.io/nf-plugins-s...)

21.06.2025 12:02 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Preview
Welcome The aim of this site On this site, you will find comprehensive information about Nextflow plugins, including details about their release dates and the number of downloads for each.

Exciting update! πŸŽ‰ We've fully re-engineered the #nextflow plugin stats site!
It's now hosted at incsteps.github.io/nf-plugins-s... and features a significantly improved user experience, including enhanced readability, full-text search, and a view of the top 10 most downloaded releases per plugin.

16.06.2025 08:12 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

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