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Phil Biggin

@philbiggin.bsky.social

Computational biochemist, interested in neuronal signalling at the atomic level and computer-aided drug design. All views my own. bigginlab.web.ox.ac.uk

837 Followers  |  364 Following  |  61 Posts  |  Joined: 12.11.2024
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Posts by Phil Biggin (@philbiggin.bsky.social)

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Home Office advisers launch review of UK visas to attract top talent Study by independent committee announced as concerns grow that immigration crackdown will hit fiscal plans

This sounds like a step in the right direction.

www.ft.com/content/89ba...

27.02.2026 21:33 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
In-person training. 7th UK Workshop on Membrane Proteins. Birmingham, UK. 15-17 April 2026.

Includes Biochemical Society logo, image of scientists in lab coats, in a lab, and event logo.

In-person training. 7th UK Workshop on Membrane Proteins. Birmingham, UK. 15-17 April 2026. Includes Biochemical Society logo, image of scientists in lab coats, in a lab, and event logo.

There are still a few places left for the 7th UK Workshop on Membrane #Proteins! Join us from 15-17 April at Aston University to understand the basics of membrane protein purification using cutting edge methods ๐Ÿงช ow.ly/rx0B50YbAUt

27.02.2026 11:43 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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If you are a #GROMACS user and/or interested in #moleculardynamics simulations join us next week for our "What's new in GROMACS 2026.0" #webinar

๐Ÿ—“๏ธ 3 March 2026, 15:00 CET
โœ๏ธ bioexcel.eu/cpok

@gromacs.bsky.social

25.02.2026 10:10 โ€” ๐Ÿ‘ 5    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Cool opportunity here!

25.02.2026 16:32 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Structural determinants for GPCR-mediated inhibition of TASK K2P channels by diacylglycerol and its dysfunction in disease - The EMBO Journal Two-Pore Domain K+ (K2P) channels are crucial determinants of the resting membrane potential and of cellular electrical excitability in many different cell types. TASK-1 and TASK-3 K2P channel activit...

Great to see this paper out with @profkalium.bsky.social - with MD from David Seiferth.

GqPCR inhibition inversely correlates with channel open probability, and results from a state-dependent destabilisation of the open state by DAG promoting channel closure.

link.springer.com/article/10.1...

25.02.2026 15:52 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Absolutely brilliant!

24.02.2026 15:08 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Come work with Ben Berks FRS in Oxford
2 x PDRA posts: Molecular Analysis of Bacterial Outer Membrane Protein Biogenesis

2 complementary projects investigating bacterial outer membrane protein biogenesis. Building on our recent work (Nature (2015) 647: 479-487)

my.corehr.com/pls/uoxrecru...

24.02.2026 07:49 โ€” ๐Ÿ‘ 14    ๐Ÿ” 16    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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UBA6 specificity for ubiquitin E2 conjugating enzymes reveals a priority mechanism of BIRC6 Nature Structural & Molecular Biology - Riechmann et al. uncover structural features governing ubiquitin transfer from ubiquitin-activating E1 enzymes UBA1 and UBA6 to specific E2...

Excited to share our work into ubiquitin E1-E2 specificity mechanisms. CryoEM visualising #ubiquitin transfer,biochemistry,evolution @labhofmann.bsky.social & tissue expression analyses @psarkies.bsky.social Big thanks to the team,reviewers & handling editor @dimitristypas.bsky.social rdcu.be/eTRdR

09.12.2025 13:21 โ€” ๐Ÿ‘ 37    ๐Ÿ” 15    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 2
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The Lipid Interactome: an interactive and open access platform for exploring cellular lipidโ€“protein interactions AbstractSummary. Lipidโ€“protein interactions play essential roles in cellular signaling and membrane dynamics, yet their systematic characterization has lon

This is SO COOL!!!

academic.oup.com/bioinformati...

24.02.2026 02:23 โ€” ๐Ÿ‘ 20    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

MDAnalysis is participating in #GSoC 2026!

๐Ÿ‘‰ Read our blog post for details on how you can apply to work with MDAnalysis through GSoC: www.mdanalysis.org/2026/02/19/g...

๐Ÿ—“๏ธ Pre-proposals must be submitted by March 9.

โ—For transparency and fairness, use public forums for all #GSoC communications.

23.02.2026 16:31 โ€” ๐Ÿ‘ 5    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Congratulations!

22.02.2026 01:24 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Learning the committor without collective variables - Nature Computational Science By learning directly from atomic motion, without the need for handcrafted descriptors, a graph neural network reveals how molecular systems change state, delivering accurate kinetics and atom-level in...

๐Ÿ“ขOut now! Work from @chipotlab.bsky.social and colleagues presents a method that learns from atomic motion without the need for handcrafted descriptors, allowing for accurate kinetics and atom-level insights. www.nature.com/articles/s43...

๐Ÿ”“ rdcu.be/e4p3B

17.02.2026 15:58 โ€” ๐Ÿ‘ 6    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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๐Ÿง Who will be presenting their #research projects during the upcoming #Theory #workshop in #Hรผnfeld? โฉ Take a look at the program and list of #speakers. www.mpinat.mpg.de/workshop/hue... #Registration for ๐Ÿ–ฅ๏ธ online only participation is still open...

20.02.2026 08:32 โ€” ๐Ÿ‘ 1    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Ever get tired of tiny timesteps bottlenecking your MD simulations?

We show how to train a model for large-timestep Hamiltonian dynamics directly on standard MLFF datasets. ๐—ก๐—ผ ๐—ฟ๐—ฒ๐—ณ๐—ฒ๐—ฟ๐—ฒ๐—ป๐—ฐ๐—ฒ ๐˜๐—ฟ๐—ฎ๐—ท๐—ฒ๐—ฐ๐˜๐—ผ๐—ฟ๐—ถ๐—ฒ๐˜€, ๐—ป๐—ผ ๐˜‚๐—ป๐—ฟ๐—ผ๐—น๐—น๐—ถ๐—ป๐—ด, ๐—ป๐—ผ ๐˜๐—ฒ๐—ฎ๐—ฐ๐—ต๐—ฒ๐—ฟ needed!

๐Ÿงต๐Ÿ‘‡

19.02.2026 15:05 โ€” ๐Ÿ‘ 18    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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Insights from aquaporin structures into drug-resistant sleeping sickness.

๐Ÿ”— buff.ly/Y0A47zR

19.02.2026 21:02 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Webinar: From Quick Script to Reproducible Workflow: Small Research Software Engineering Habits, Big Impact (2026-02-17) Date: 17 February 2026 Time: 15:00 CET Registration Abstract Reproducible analysis pipelines sound great in theory, but what does that look like in the life of a busy researcher doing biomolecular sy...

โฐ Don't forget to register for our #webinar tomorrow, 17 February 2026, 15:00 CET
โœ๏ธ bioexcel.eu/7c2s

"From quick script to reproducible workflow"

#molecularsimulations #workflows #FAIR #SoftwareEngineering

@coderefinery.org

16.02.2026 15:19 โ€” ๐Ÿ‘ 4    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Molecular dynamics simulations reveal DNA gate opening mechanisms for M. smegmatis topoisomerase 1A Type 1A topoisomerases relax torsional strain in DNA via a strand passage mechanism in which a protein-mediated DNA gate must open during the enzymeโ€™s catalytic cycle. This gate-open conformationalโ€ฆ

#OPENACCESS: Molecular dynamics simulations reveal DNA gate opening mechanisms for M. smegmatis topoisomerase 1A. Deepesh Sigdel and Maria Mills. buff.ly/GZXDTzi

16.02.2026 19:02 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Research Associate on genAI applied to drug discovery (ref. PD/25/23) - IRB Barcelona IRB Barcelona is seeking a talented and highly motivated Research Associate to join the Structural Bioinformatics and Network Biology group (https://sbnb.irbbarcelona.org), led by Dr. Patrick Aloy,...

๐Ÿš€ JOB OPPORTUNITY: Research Associate in GenAI applied to Drug Discovery! ๐Ÿงฌ

Full details: recruitment.irbbarcelona.org/jobs/6928145...

16.02.2026 13:02 โ€” ๐Ÿ‘ 3    ๐Ÿ” 3    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

There's still time to make a 16 February poster abstract deadline for the Molecular and ion flows #FaradayDiscussion, Manchester, 13-15 April 2026. Poster presenters can expect lively discussions, networking, and a collaborative atmosphere where every delegate can contribute. #ChemSky #Nanofluidics

13.02.2026 18:07 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Our new preprint. First prospective use of a transformer model for drug repurposing against Streptococcus pneumoniae, a major AMR threat. Great collaboration with Nick Croucherโ€™s lab. Of 11 tested, 9 showed strong activity, some against multidrugโ€‘resistant strains.
#AI #AMR

16.02.2026 11:38 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Second time this month I've encountered a paper on MD simulations of protein kinases with no coordinates from the trajectory provided. I'd like a few snapshots or cluster centroids. Something.

Makes these papers essentially useless.

14.02.2026 05:57 โ€” ๐Ÿ‘ 7    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Structural basis for domain coupling in heteromeric glycine receptors revealed by an atypical allosteric agonist Counteracting ligands stabilize glycine receptor states revealing mechanisms of pentameric ligand-gated channel allostery.

Check out our latest paper on the glycine receptor with
@chakrapanilab.bsky.social

where we show the interplay between the orthosteric and allosteric binding sites.

www.science.org/doi/10.1126/...

14.02.2026 08:24 โ€” ๐Ÿ‘ 22    ๐Ÿ” 8    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Associate Director, Computational Chemistry at Takeda Pharmaceutical Learn more about applying for Associate Director, Computational Chemistry at Takeda Pharmaceutical

Takeda (Boston, MA) looking for Associate Director, Computational Chemistry, (PhD, 7+ yrs exp): jobs.takeda.com/job/boston/a... #chemjobs #compchem

(position pretty old, Nov 2025 posting)

12.02.2026 20:34 โ€” ๐Ÿ‘ 6    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Happy that simulations, performed by Gabriel Diaz, stellar master student in the team, helped to decipher how PIP2 lipids help recruiting Munc13 protein to prime synaptic vesicle Collaborative work led by F. Pincet @normalesup.bsky.social

full story at @pnas.org : www.pnas.org/doi/10.1073/...

12.02.2026 09:08 โ€” ๐Ÿ‘ 5    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
In-person training. 7th UK Workshop on Membrane Proteins. Birmingham, UK. 15-17 April 2026.

Includes Biochemical Society logo, image of scientists in lab coats, in a lab, and event logo.

In-person training. 7th UK Workshop on Membrane Proteins. Birmingham, UK. 15-17 April 2026. Includes Biochemical Society logo, image of scientists in lab coats, in a lab, and event logo.

Registration is open for the 7th UK Workshop on Membrane #Proteins! Join us from 15-17 April to understand the basics of membrane protein purification using cutting edge methods. Places are limited, save ยฃ50 with our earlybird discount if you register before 15 February: ow.ly/rx0B50YbAUt

10.02.2026 09:50 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Photo of panel discussion from our careers event, with Lizzie Coker (AZ), Marta Polak (J&J), and Ben Hall (UCL)

Photo of panel discussion from our careers event, with Lizzie Coker (AZ), Marta Polak (J&J), and Ben Hall (UCL)

Inspiring computational #cancer careers session yesterday with speakers from J&J and AZ!

Interested in the field? On Friday Iโ€™m giving a lecture to introduce our new MSc Computational Cancer. Register below:

www.ucl.ac.uk/engineering/...

11.02.2026 15:37 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Congratulations Beatrix!

11.02.2026 10:19 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Indeed :-(

10.02.2026 18:55 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

something to digest... ;-)

10.02.2026 17:26 โ€” ๐Ÿ‘ 0    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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๐Ÿ“ฉ Join our interdisciplinary team as #PhD student or #postdoc and contribute to the project "Theory and #Algorithms for Structure Determination from Single Molecule X-Ray Scattering Images", a new route to the structure determination of biomolecules. #job #XFEL in #Gรถttingen ๐Ÿ‡ฉ๐Ÿ‡ช
@mpi-nat.bsky.social

10.02.2026 08:15 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0