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Philipp Bayer

@philippbayer.bsky.social

Bioinformatics / tech / books 'It is required that one man should goof gloriously for the people.'

981 Followers  |  1,232 Following  |  1,020 Posts  |  Joined: 19.12.2023
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Posts by Philipp Bayer (@philippbayer.bsky.social)

"Premature optimisation is the enemy of progress!" I shout as I submit yet another half-baked vibe coded PR

27.02.2026 23:33 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Aletheia tackles FirstProof autonomously We report the performance of Aletheia (Feng et al., 2026b), a mathematics research agent powered by Gemini 3 Deep Think, on the inaugural FirstProof challenge. Within the allowed timeframe of the chal...

Pretty wild Ai result, that will probably get less press than the latest Ai boyfriend article: arxiv.org/abs/2602.21201

A benchmark was created with professional mathematicians, using problems naturally encountered in their research and not publicly released. Aletheia solved 6/10 autonomously.

26.02.2026 09:36 β€” πŸ‘ 150    πŸ” 28    πŸ’¬ 8    πŸ“Œ 5
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Technical Lead Biostatistics Job in Nedlands, Perth WA - SEEK Life-changing science is our focus; we start there, and everything else follows

We (PYC Therapeutics) are hiring two biostatisticians, one senior, one junior

www.seek.com.au/job/90561321...
and
www.seek.com.au/job/90560959...

We need people who can give us confidence in rare disease diagnostics with small n!

#biostatistics

26.02.2026 01:02 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Outcomes for full apps won’t arrive until β€œ15 Jan – 15 April” next year according to ARC’s new schedule – that’s up to 16 months since the EOIs were submitted πŸ€―β€¨

▢️ www.arc.gov.au/funding-rese...

26.02.2026 00:12 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 3    πŸ“Œ 0
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Ocean Genomes: reference genome resources for marine vertebrates - npj Biodiversity npj Biodiversity - Ocean Genomes: reference genome resources for marine vertebrates

#ERGAReads | 🐚 🌊 🧬 Ocean Genomes: reference genome resources for marine vertebrates
rdcu.be/e25OP

25.02.2026 09:02 β€” πŸ‘ 6    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Sam Altman’s anti-human worldview OpenAI CEO downgrades humanity in pursuit of goal to merge with computers

OpenAI is a menace. Two recent stories make that clearer than ever.

One day you have Sam Altman denigrating humanity to defend AI. The next, WSJ reveals OpenAI could have alerted Canadian police of a potential mass shooter, but refused pressure from employees. That person went on to kill 8 people.

23.02.2026 21:44 β€” πŸ‘ 1657    πŸ” 621    πŸ’¬ 18    πŸ“Œ 75

As a teenager I was obsessed with conspiracy theories, I now think because in conspiracies, the people running the show are good at what they do.
But these days I'm learning that the power in the shadows is as garbage as everyone else

24.02.2026 00:46 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

I remember when Humankapital (human capital) was voted worst German word. True

22.02.2026 05:44 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

My phone knows my age because it just auto-replaced "instagram" by "installation"

22.02.2026 04:55 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

There's an image of people, of ourselves as a species, behind this statement that I find disgusting to my core.
He thinks humans are purely automatons to extract value from, and I'm sure that's the majority view of his social class.

22.02.2026 04:06 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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Annotating genomes at increased scale and resolution - Nature Reviews Genetics In this Review, Ji et al. overview how rapidly advancing experimental and computational methods are enabling improved and automated annotation of gene structure and function, providing researchers wit...

Annotating genomes at increased scale and resolution
www.nature.com/articles/s41...

22.02.2026 03:14 β€” πŸ‘ 23    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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AI succeeds in diagnosing rare diseases An artificial-intelligence system uses clinical data, genetic information and literature searches to suggest diagnoses and provides the underlying reasoning.

An agentic system for rare disease diagnosis with traceable reasoning
www.nature.com/articles/d41...
Surprisingly accurate!! I guess there's a long tail of information, especially in rare diseases, where the literature exists but physicians are unlikely to have encountered the papers

19.02.2026 12:02 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

❀️said NO to yet another thing I was doing forever and nobody was paying me for ❀️

19.02.2026 04:24 β€” πŸ‘ 10    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Real wages have gone backwards. Even earning $100,000 isn’t what it used to be By 2025, 45% of full-time workers in Australia had β€˜six figure’ earnings. But years of high inflation mean cracking this threshold doesn’t mean what it used to.

I'm finally on level D salary and with three dependents I might as well be back on my phd scholarship. Always one unexpected cost away from scrounging to pay rent.

"Real wages have gone backwards. Even earning $100,000 isn’t what it used to be"
theconversation.com/real-wages-h...

18.02.2026 09:52 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

350 seems to be the average for kids sports clubs! Which is also way too much if you think about it - what does that pay?

16.02.2026 13:34 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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BarleyGVDB: A Comprehensive Barley Variome Database for Population Evolution and Molecular Breeding Research in Barley
onlinelibrary.wiley.com/doi/full/10....

16.02.2026 08:36 β€” πŸ‘ 3    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Trying to sign up my 7 year old for soccer - they want $971 per season. How am I supposed to afford that

16.02.2026 12:09 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 2    πŸ“Œ 0

'To run your locally installed version of Prettier, prefix the command with npx , yarn exec , pnpm exec , or bunx'

they have played us for absolute fools

16.02.2026 05:30 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
How Generative and Agentic AI Shift Concern from Technical Debt to Cognitive Debt This piece by Margaret-Anne Storey is the best explanation of the term cognitive debt I've seen so far. Cognitive debt, a term gaining traction recently, instead communicates the notion that …

Short musings on "cognitive debt" - I'm seeing this in my own work, where excessive unreviewed AI-generated code leads me to lose a firm mental model of what I've built, which then makes it harder to confidently make future decisions simonwillison.net/2026/Feb/15/...

15.02.2026 05:22 β€” πŸ‘ 465    πŸ” 88    πŸ’¬ 42    πŸ“Œ 20

Most unimpressive/boring thing about the international far-right is how much they copy each others' homework. Not a single new idea, not a single invented concept. The dumbest people run the show.

15.02.2026 06:22 β€” πŸ‘ 5    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
Spiderman pointing at spiderman

Spiderman pointing at spiderman

The AI-generated code review is criticising the AI-generated pull request

14.02.2026 04:18 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Happy birthday to one of my favourite haters, Charles Darwin

12.02.2026 16:31 β€” πŸ‘ 10351    πŸ” 3083    πŸ’¬ 162    πŸ“Œ 419
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when the README on github looks like this you KNOW the pipeline hasn't been updated in >2 years

13.02.2026 07:02 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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the most annoying (of many) things of this AI/copilot integration in Positron is when the AI integration is faster than the file-system integration, so you get an AI-hallucinated file path (always wrong) far faster than the real file on your filesystem

12.02.2026 02:50 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Or, like depression! Gradually, then suddenly

11.02.2026 01:20 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

we invented literate programming so you don't write English text around your code blocks

11.02.2026 01:18 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Love having this kind of brain-brokenness where I spend 20 minutes looking for my phone, not remembering where I put it, only remembering thinking "haha what an unusual place to put the phone"

(It was on top of the children's clothes drawer)

10.02.2026 23:59 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Neither email nor SMS based password reset works so I guess we'll never know what they want from me

10.02.2026 11:55 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
The dreaded myGov inbox email

The dreaded myGov inbox email

They know when I'm getting too relaxed. That's why they send these at 6:33pm

10.02.2026 10:40 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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Gapless pangenome analyses reveal fast Brassica rapa subspeciation Brassica rapa (Br) encompasses many morphotypes and subspecies, so it is a good model with which to investigate plant diversification and subspeciation. Here, we resequenced the genomes of 1720 Br acc...

Haven't seen a plant pangenome in Science for a while!
www.science.org/doi/abs/10.1...
Eleven T2T genomes + 1720 accessions sequenced

10.02.2026 00:09 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0