outreachy interns
Hello from the @bioconductor.bsky.social community and our interns @tosina.bsky.social and @docteedee.bsky.social who will work with us on bugsigdb.org/Main_Page
Happy internship start to all #outreachy interns!
10.12.2025 12:59 — 👍 6 🔁 2 💬 1 📌 2
The Tidyomics Ecosystem – tidyomicsBlog
An introduction to the tidyomics ecosystem, including principles, core packages, publications, and community resources for tidy omic analysis.
It's official! The #tidyomics blog is up! 🚀
Here, the introductory post
tidyomics.github.io/tidyomicsBlo...
This blog aims to publish not only news about our community but also anything related to tidy interfaces, opinions, events, and more.
Plz share! 🙏
@bioconductor.bsky.social #rstats
07.12.2025 23:07 — 👍 26 🔁 13 💬 0 📌 1
Bioconductor in Africa: Highlights from our first workshop in West Africa - Benin – Bioconductor community blog
A blog for the Bioconductor community!
#BiocInBenin brought together researchers, students, and instructors from across Africa and beyond for a week of hands-on learning in R, Bioconductor and Bulk-RNaseq analysis workflow at the University of Abomey-Calavi.
📄 Here’s a recap of what we accomplished: blog.bioconductor.org/posts/2025-1...
11.12.2025 09:00 — 👍 3 🔁 2 💬 0 📌 0
Today, 6th of December, we celebrate Finland's 108th Independence Day.
The next European Bioconductor Conference (EuroBioC2026) will be held in Finland, and the abstract submission is open!
See the conference webpage: eurobioc2026.bioconductor.org
@bioconductor.bsky.social
#EuroBioC2026
06.12.2025 20:20 — 👍 3 🔁 1 💬 0 📌 0
⏰ Only a few hours left to register!
Don’t miss today’s Bioconductor Seminar Series session:
“Deep-learning-based Gene Perturbation Effect Prediction Does Not Yet Outperform Simple Linear Baselines.”
🗓️ December 2, 2025
🕒 9PM CET / 3PM EST / 12PM PST
👉 Register here: dfci.zoom.us/webinar/regi...
02.12.2025 07:00 — 👍 5 🔁 1 💬 0 📌 1
Orchestrating Microbiome Analysis with Bioconductor
2–6 February 2026
Join our online course Orchestrating Microbiome Analysis with @bioconductor.bsky.social (2–6 Feb 2026)! Learn hands-on microbiome data analysis, diversity metrics, and multi-omics integration with @antagomir.bsky.social & Tuomas Borman .
www.physalia-courses.org/courses-work...
26.11.2025 18:01 — 👍 3 🔁 4 💬 0 📌 0
Representing EuroBioC2026 at the @abacbs.bsky.social Conference this week.
The next European @bioconductor.bsky.social Conference will be in Turku, Finland!
#ABACBS2025
#EuroBioC2026
25.11.2025 22:33 — 👍 15 🔁 8 💬 0 📌 0
The Euro Bioc 2026 in Turku is official!
27.11.2025 05:06 — 👍 11 🔁 5 💬 1 📌 0
🚀 EuroBioC2026 – Call for Abstracts is Now Open!
We invite submissions for short talks, posters, and workshops for EuroBioC2026 by Jan 30, 2026.
👉 Submit here: openreview.net/group?id=bio...
⚠️ Note: Register on OpenReview at least two weeks before the abstract deadline to be able to submit.
27.11.2025 09:30 — 👍 6 🔁 5 💬 0 📌 0
Bioconductor in Africa: Ethiopia’s First In-Person Course – Bioconductor community blog
A blog for the Bioconductor community!
🌍 We are proud to share highlights from Ethiopia’s first in-person Bioconductor workshop, held in Addis Ababa from 25-29 Aug 2025!
The course united 26 participants for five days of hands-on training in R/Bioconductor and bulk RNASeq analysis.
🔗 Read more: blog.bioconductor.org/posts/2025-1...
24.11.2025 09:57 — 👍 5 🔁 3 💬 1 📌 0
Our Single-cell RNA-seq with R and @bioconductor.bsky.social course is coming to an end!
A huge thanks to @almeidasilvaf.bsky.social and Jacques Serizay for delivering another fantastic edition.
Thank you to everyone who joined us this week — we wish you the best of luck with your projects!
21.11.2025 17:18 — 👍 4 🔁 1 💬 0 📌 0
Standing on the shoulders of giants: immense thanks also to @bioconductor.bsky.social core, its community and developers, for the two decades of foundational work we could build on today.
21.11.2025 17:31 — 👍 8 🔁 1 💬 0 📌 0
Day 3 at #BiocInBenin is going strong! 💪🏽
We kicked off with hands-on R/Bioconductor sessions on data handling and reproducible genomics
Today and tomorrow, we dive into the RNA-seq workflow.
Later in the week: “Bring Your Own Data” Day, where participants apply their new skills to their own datasets
19.11.2025 09:16 — 👍 4 🔁 1 💬 0 📌 0
🚨 Last chance to register!
Registration for BioCAsia closes this Friday, 21 November, at 5 PM (Australia time). BioCAsia will run in parallel with the ABACBS 2025 Workshops at Flinders University, Adelaide, on Thu 27 & Fri 28 November 2025.
👉 Register now: www.abacbs.org/abacbs-2025-...
18.11.2025 22:00 — 👍 1 🔁 0 💬 1 📌 0
We’re live at GBioS, University of Abomey-Calavi in Benin! 5 days of learning, coding & collaboration began yesterday at #BiocInBenin.
C’est parti! Une semaine d’apprentissage et de collaboration a commencé à GBioS hier.
#Bioconductor #RNASeq #BiocInBenin
18.11.2025 11:20 — 👍 4 🔁 0 💬 0 📌 0
Bioconductor Seminar Series flyer. Title: “Deep-learning-based Gene Perturbation Effect Prediction Does Not Yet Outperform Simple Linear Baselines.” Event on Dec 2, 2025 at 9 PM CET / 3 PM EST / 12 PM PST. Speakers: Constantin Ahlmann-Eltze, Wolfgang Huber, Simon Anders. Discussant: Davide Risso. Includes a “Register for Zoom Link” button, QR code, and Bioconductor logo.
📣 Calling Bioconductor users and developers! 🧬 ✨
Join our new quarterly online seminar series featuring contributor innovations and discussions on package integration. Enjoy 30 minutes of insights, 15 minutes of guided discussion, and 15 minutes of open Q&A. Share questions live or in chat!
14.11.2025 16:50 — 👍 6 🔁 6 💬 0 📌 1
🎨 The EuroBioC2026 sticker design contest is live!
We invite creative minds to design the official logo for the European Bioconductor Conference 2026, scheduled to take place in June 2026 in Turku, Finland.
👉Enter by submitting your logo design here by Jan 31, 2026: docs.google.com/forms/d/e/1F...
12.11.2025 09:00 — 👍 0 🔁 0 💬 0 📌 0
single-cell RNA-seq analysis with R/Bioconductor
17-21 November 2025 To foster international participation, this course will be held online
🎓 Upcoming Online Course: Single-cell RNA-seq Analysis with R/Bioconductor
📅 November 17–21, 2025
This course offers hands-on training in scRNA-seq data analysis, from preprocessing & quality filtering to cell cluster exploration.
👉 Register & learn more: www.physalia-courses.org/courses-work...
07.11.2025 09:30 — 👍 4 🔁 2 💬 0 📌 0
R/Bioconductor for Mass Spectrometry and Proteomics
Dates 17-19 November 2025 To foster international participation, this course will be held online
🎓 Upcoming Online Course: R/Bioconductor for Mass Spectrometry & Proteomics
📅 November 17–19, 2025
Join Dr Laurent Gatto for a hands-on course on mass spectrometry–based proteomics analysis using R and Bioconductor.
👉 Register & learn more: www.physalia-courses.org/courses-work...
06.11.2025 10:00 — 👍 14 🔁 8 💬 0 📌 1
🌟 Sponsor Spotlight 🌟
The Chan Zuckerberg Initiative supports the science and tech that will make it possible to cure, prevent and manage all diseases within this century
Huge thanks to CZI for sponsoring EuroBioC2025!
Interested in partnering with EuroBioC2026? Contact eurobioc@bioconductor.org
31.10.2025 13:05 — 👍 2 🔁 0 💬 0 📌 0
🌟 Sponsor Spotlight 🌟
ISGlobal is a leading research hub in healthcare and academia, advancing global health through research, policy, and training.
A huge thank you to ISGlobal for sponsoring EuroBioC2025!
Interested in partnering with EuroBioC2026? Contact eurobioc@bioconductor.org
31.10.2025 09:01 — 👍 0 🔁 0 💬 0 📌 0
🌟 Sponsor Spotlight 🌟
Seqera centralizes data, streamlines pipelines, and brings mission-critical infrastructure under one secure, compliant umbrella.
A huge thank you to Seqera for sponsoring EuroBioC2025!
Interested in partnering with EuroBioC2026? Please contact eurobioc@bioconductor.org
30.10.2025 13:02 — 👍 0 🔁 0 💬 0 📌 0
🌟Sponsor Spotlight
MELIS-UPF is a María de Maeztu Centre of Excellence advancing science with meaningful social impact.
A huge thank you to MELIS-UPF for sponsoring #EuroBioC2025!
Interested in sponsoring #EuroBioC2026? Contact eurobioc@bioconductor.org
30.10.2025 09:01 — 👍 0 🔁 0 💬 0 📌 0
🧬 EuroBioC2026 is coming to Turku, Finland, from June 3–5, 2026!
Expect 3 exciting days with the Bioconductor community, showcasing the latest advances in Bioconductor software and emerging technologies shaping computational biology.
👉 More details soon at eurobioc2026.bioconductor.org
29.10.2025 09:02 — 👍 12 🔁 11 💬 0 📌 0
RNA sequencing data with R/Bioconductor
Online, 3-14 November 2025 To foster international participation, this course will be held online
🎓 Upcoming Online Course: RNA Sequencing Data with R/Bioconductor by Physalia Courses and Bioconductor Training
📅 November 3–14, 2025
Instructor: Dr Ludwig Geistlinger
👉 Register and learn more: www.physalia-courses.org/courses-work...
27.10.2025 10:00 — 👍 2 🔁 2 💬 0 📌 0
EuroBioC2025 conference recap – Bioconductor community blog
Highlights from the 2025 European Bioconductor Conference in Barcelona
Thank you to all our amazing sponsors, organizers, speakers, and attendees for making #EuroBioC2025 in Barcelona such a success!
Read the full recap blog post here👉 blog.bioconductor.org/posts/2025-1...
And, see you next year at #EuroBioC2026! 🎉
#Bioconductor #Community #Conference
24.10.2025 13:00 — 👍 5 🔁 3 💬 0 📌 0
Bioconductor Code of Conduct Committee Elections 2025
The Bioconductor Code of Conduct Committee updates, disseminates, upholds and enforces the Code of Conduct (http://bioconductor.org/about/code-of-conduct/) across all platforms of the Bioconductor…
🛡️ Applications are now open to join the Bioconductor Code of Conduct Committee 2025!
Be part of a thoughtful, community-driven team that meets 3–5 times a year to ensure Bioconductor remains a respectful, inclusive, and thriving space 🌱
👉 Apply by October 31, 2025:
docs.google.com/forms/d/e/1F...
13.10.2025 09:00 — 👍 3 🔁 2 💬 0 📌 0
GPU Support in Bioconductor – Bioconductor community blog
Support GPU-accelerated Bioconductor packages
🚀 New on the Bioconductor Blog: GPU Support in Bioconductor
Bioconductor is building better support for GPU-accelerated package development for faster and more scalable analysis workflows
Learn how package maintainers can leverage this new GPU infrastructure: blog.bioconductor.org/posts/2025-1...
10.10.2025 09:00 — 👍 8 🔁 5 💬 0 📌 0
