Leah Smith's Avatar

Leah Smith

@leahmsmith.bsky.social

Research Fellow at University of Otago NZ interested in phages, biofilms, genomics, CRISPR & phage therapy

37 Followers  |  43 Following  |  3 Posts  |  Joined: 20.11.2024  |  1.5127

Latest posts by leahmsmith.bsky.social on Bluesky

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A phage-encoded anti-CRISPR protein co-opts host enolase to prevent type III CRISPR immunity - Nature Microbiology Streptococcus thermophilus phages circumvent host CRISPR defences via AcrIIIA2, which complexes with enolase, a highly abundant glycolysis enzyme, to block phage RNA binding.

#NewResearch

Streptococcus thermophilus phages circumvent host CRISPR defences via AcrIIIA2, which complexes with enolase, a highly abundant glycolysis enzyme, to block phage RNA binding

#MicroSky #CRISPR 🦠

www.nature.com/articles/s41...

11.11.2025 15:49 β€” πŸ‘ 13    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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A miniature CRISPR–Cas10 enzyme confers immunity by inhibitory signalling - Nature Panoptes, an anti-phage defence system against virus-mediated immune suppression, is revealed.

Today in @nature.com , we highlight how a cousin of CRISPR-Cas10, mCpol, establishes an evolutionary trap in anti-phage immune systems.

Check out @erinedoherty.bsky.social and my work from @doudna-lab.bsky.social lab here:
www.nature.com/articles/s41...

01.10.2025 17:56 β€” πŸ‘ 108    πŸ” 54    πŸ’¬ 3    πŸ“Œ 2

Nice write up by Kalani Gast and Rodolphe Barrangou previewing our latest paper 🧫 βœ‚οΈ 🧬 out now in @cp-cellhostmicrobe.bsky.social

15.09.2025 21:02 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Applied research is digging for gold, basic research is figuring out where to dig. Marsden used to fund it all. Each grant is rigorously assessed in 2 rounds by a panel of local & international experts. It is risky research, with potentially high rewards.

06.09.2025 21:35 β€” πŸ‘ 37    πŸ” 15    πŸ’¬ 2    πŸ“Œ 1
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Phage susceptibility to a minimal, modular synthetic CRISPR-Cas system in Pseudomonas aeruginosa is nutrient dependent | Philosophical Transactions of the Royal Society B: Biological Sciences CRISPR-Cas systems can provide adaptive, heritable immunity to their prokaryotic hosts against invading genetic material such as phages. It is clear that the importance of acquiring CRISPR-Cas immunit...

Can CRISPR-Cas systems target any phage? Yes, no, it depends? What does it depend on? The second paper from my PhD came out today in a special issue of Phil Trans B on the ecology and evolution of bacterial immune systems
doi.org/10.1098/rstb...

04.09.2025 11:32 β€” πŸ‘ 27    πŸ” 17    πŸ’¬ 3    πŸ“Œ 3
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Protein Structure Informed Bacteriophage Genome Annotation with Phold Bacteriophage (phage) genome annotation is essential for understanding their functional potential and suitability for use as therapeutic agents. Here we introduce Phold, an annotation framework utilis...

Stoked to finally have a preprint out for Phold, our tool that uses protein structural information to enhance phage genome annotation #phagesky 1/n

www.biorxiv.org/content/10.1...

08.08.2025 07:10 β€” πŸ‘ 134    πŸ” 65    πŸ’¬ 5    πŸ“Œ 3
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Type I CRISPR-Cas immunity primes type III spacer acquisition CRISPR-Cas systems are diverse, with microbes harboring multiple classes and subtypes. Type I DNA-targeting and type III RNA-targeting systems often c…

In a multi-CRISPR-Cas system host, @peterfineran.bsky.social & I found that type I priming promotes spacer 🧬 uptake & maintenance by a type III system & that multiple systems minimize phage escape ⬇️ @cp-cellhostmicrobe.bsky.social @otagomicroimmuno.bsky.social
www.sciencedirect.com/science/arti...

20.08.2025 02:06 β€” πŸ‘ 6    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0

Still open for applications! We are looking for prospective new faculty doing exciting research in virology or any vector borne diseases

25.07.2025 23:04 β€” πŸ‘ 4    πŸ” 9    πŸ’¬ 0    πŸ“Œ 0
Conference flyer, all info is on link too

Conference flyer, all info is on link too

Please share! 🦠
Workshop on Phage Therapy in Liverpool on 25th November organised by Stineke van Houte, @jojofoth.bsky.social, @brockhurstlab.bsky.social, & Edze Westra.

Limited FREE tickets & more info here: sites.exeter.ac.uk/vanhoutelab/...

#MicroSky

22.07.2025 19:03 β€” πŸ‘ 15    πŸ” 13    πŸ’¬ 2    πŸ“Œ 0
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Fold first, ask later: structure-informed function annotation of Pseudomonas phage proteins Phages, the viruses of bacteria, harbor an incredibly diverse repertoire of proteins capable of manipulating their bacterial hosts, inspiring many medical and biotechnological applications. However, t...

πŸ“£ New preprint alert!

Happy to share the first results from our effort to reannotate Pseudomonas #phage proteins of unknown function, using structural bioinformatics.

πŸ“„ doi.org/10.1101/2025...

21.07.2025 06:51 β€” πŸ‘ 41    πŸ” 17    πŸ’¬ 1    πŸ“Œ 0
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Next up from our lab - a ring nuclease with a novel fold which cleaves all cOA species involved in Type III CRISPR defence. It's also found in plasmid and phage genomes, where it presumably functions as an anti-CRISPR.
www.biorxiv.org/content/10.1...

18.07.2025 07:53 β€” πŸ‘ 42    πŸ” 14    πŸ’¬ 3    πŸ“Œ 1

Great to see this comprehensive work on phage DNA arabinosylation & defense finally out! πŸ§¬πŸš«βœ‚οΈ A major collaborative effort & stellar PhD work by Marina Mahler, whom I had the pleasure of co-supervising at Otago πŸ‘©πŸ»β€πŸ”¬ @peterfineran.bsky.social @universityofotago.bsky.social @cellpress.bsky.social #mm

26.06.2025 22:44 β€” πŸ‘ 8    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0

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