France Génomique

@fondationtaraocean.bsky.social @genoscopeumr.bsky.social
@ethz.ch

Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity - Nature Reconstructing microbial genomes from 820 reef-building corals collected at 99 reefs across 32 islands throughout the Pacific Ocean highlights the importance of conserving coral reefs as vital reservo...

Beyond the vibrant colors of coral reefs lies a hidden chemical universe! 🧬🪸 New research in @nature.com reveals that coral microbes are untapped "biosynthetic reservoirs", full of unique natural products. Protect the tiny to save the big! Funded by France Génomique.
www.nature.com/articles/s41...

👏 #EAGS2026 is over! Thanks to all our speakers and attendees to have made this symposium so lively and interactive.
😊 See you in 2 years!
👍 Thanks to our generous sponsors @fr-genomics.bsky.social , @green-omics, @Illumina, @nebiolabs.bsky.social, @qiagen.bsky.social

⏱️ EAGS2026: Only a few days left to register, until 21st of January!

😁 The EAGS2026 (International Environmental and Agronomical Genomics symposium) program is finally online HERE: eags2026.sciencesconf.org/resource/pag...
⏱️ Registration closes on 14 January!

🚨Extension of the abstract submission deadline: now opened until the 24th of Oct!

🚨Only 10 days left to submit an abstract for poster or oral presentation!
➡️Until the 15th of Oct!

GNNenrich: a novel method for pathway enrichment analysis based on graph neural network AbstractMotivation. Graph neural network (GNN) models have emerged in many fields and notably for biological networks constituted by genes or proteins and

Introducing GNNenrich, a new GNN-based method for pathway enrichment analysis. By incorporating gene/protein interactions, it improves biological interpretation and offers new perspectives. #CNRGH #Bioinformatics @cea.fr
academic.oup.com/bioinformati...

🚨PLEASE SHARE!
France Génomique and the National network GREEN-omics are pleased to inform you of their upcoming Symposium on Environmental and Agronomical Genomics!
📍Paris, France, Feb 18 to 20, 2026.
➡️ eags2026.sciencesconf.org
➡️ Registration and call for abstracts are now open!

Researchers found the virus and its RNA in the brainstem up to 80 days after infection.
The findings suggest that both viral persistence and immune responses in the brain contribute to long-term neuropsychiatric and cognitive issues.

Hamsters with long COVID present distinct transcriptomic profiles associated with neurodegenerative processes in brainstem - Nature Communications SARS-CoV-2 persists in the brainstem long after the initial infection has passed. Infected animals exhibit symptoms of anxiety, depression, and memory impairment as well as changes in the brain that c...

🧠 New research on Long COVID! 🧠

A study from a @pasteur.fr team using hamsters shows how SARS-CoV-2 can persist in the brain, causing persistent neurological symptoms like depression and memory loss.

www.nature.com/articles/s41...
#Biomics #LongCovid #SARSCoV2 #neuroscience #brainhealth

This acquisition will bring together two pioneering companies with a shared vision: to make single cell analysis more powerful, affordable and accessible to researchers worldwide.

Learn more: bit.ly/4mAWAS8

This study evaluated 4 HMW DNA extraction methods across multiple labs using a reference cell line with known SV. The aim was to assess DNA quality, sequencing performance, and effectiveness for SV analysis using long-read sequencing.
#CNRGH #CNAG #CEA_jacob

Interlaboratory evaluation of high molecular weight DNA extraction methods for long-read sequencing and structural variant analysis - BMC Genomics Background Long-read sequencing technologies enable resolution of structural variants (SV) and long-range genome assembly, but require high molecular weight (HMW) DNA of both high quantity and quality...

🧬 New study compares 4 methods for extracting high molecular weight DNA for long-read sequencing.
bmcgenomics.biomedcentral.com/articles/10....

ISHG2025 is starting!

Ecole de bioinformatique IFB – Inserm - INRAE Niveau1

Registration applications for the IFB - Inserm - Inrae 2025 School of Bioinformatics (EBAII25) “Initiation to the processing of genomic data obtained by high-throughput sequencing” are now open.
ebaii-ngs-niveau1.pasteur.cloud

@cea.fr
@inserm.fr
@cnrsbiologie.bsky.social
@sorbonne-universite.fr
Gold sponsors : @illumina @Agilent @TakaraBio
@10xgenomics.bsky.social @Hamilton
Silver sponsors:
@elembio.bsky.social
@pacbio.bsky.social
@scalebio Bronze sponsor:
@activemotifusa.bsky.social

#ISHG2025: FOR ONE WEEK ONLY, buy 1 get 1 free registration! Offer valid until 30 March, hurry!
ishg2025.sciencesconf.org
🚨Only 3 weeks left before the registration deadline: 11th of April!

AsaruSim: a single-cell and spatial RNA-Seq Nanopore long-reads simulation workflow AbstractMotivation. The combination of long-read sequencing technologies like Oxford Nanopore with single-cell RNA sequencing (scRNAseq) assays enables the

For our 1st post on Bluesky, we are excited to announce the publication of our new #bioinformatics tool #Asarusim for #SingleCellRNAseq coupled with @nanoporetech.com sequencing ! 🎉 🎊
👉 article : academic.oup.com/bioinformati...
👉 GitHub : github.com/GenomiqueENS...

cc @fr-genomics.bsky.social

Thanks to all our generous sponsors: @cea.fr @inserm.fr @cnrsbiologie.bsky.social @sorbonne-universite.fr Gold sponsors : @illumina @Agilent @TakaraBio @10xgenomics.bsky.social @Hamilton Silver sponsors: @elembio.bsky.social @pacbio.bsky.social @scalebio Bronze sponsor: @activemotifusa.bsky.social

#ISHG2025: The program is finally out! ishg2025.sciencesconf.org/resource/pag...
Thanks to everyone who sumitted an abstract, we received a lot of very good ones!
Only 4 weeks left before the registration deadline: 11th of April!

👍Abstract submission EXTENDED UNTIL THE 14th OF FEBRUARY! Still a bit of time for the latecomers!

📣#ISHG2025: Only a few days left to submit an abstract, until the 5th of February!
📍Travel grants still available!
➡️More infos: ishg2025.sciencesconf.org
@cnrsbiologie.bsky.social @cea.fr @inserm.fr

📣#ISHG2025: 3 weeks left to submit an abstract, until the 5th of February!
📍Travel grants still available!
➡️More infos: ishg2025.sciencesconf.org
@cnrsbiologie.bsky.social @cea.fr @inserm.fr