Peiwei Chen's Avatar

Peiwei Chen

@peiwei-chen.bsky.social

HHMI Hanna Gray Fellow & Postdoc with Andy Clark and Cedric Feschotte at Cornell | selfish genetic element, transposon, small RNA, evolution peiweichen.com

215 Followers  |  181 Following  |  55 Posts  |  Joined: 28.06.2024
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Posts by Peiwei Chen (@peiwei-chen.bsky.social)

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Decoding the molecular logic of rapidly evolving ZAD zinc finger proteins in Drosophila Identification of ZAD-ZnF genes as key regulators of genome organization during Drosophila embryogenesis.

Diving into evolutionary biology! What is the origin of the most abundant class of insect transcription factors, ZAD-ZnFs? We suggest that they evolved from ancestral insulator-binding proteins that control 3D genome topology.

www.science.org/doi/10.1126/...

27.02.2026 19:51 β€” πŸ‘ 30    πŸ” 15    πŸ’¬ 0    πŸ“Œ 0
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Is a β€˜selfish gene’ making a Utah family have twice as many boys as girls? Genealogy study claims first conclusive case of sex β€˜distortion’ in humans β€” but not all researchers are convinced.

Nature News on the tantalising possibility of the first documented sex-ratio distorter in humans.
www.nature.com/articles/d41...

27.02.2026 13:53 β€” πŸ‘ 9    πŸ” 4    πŸ’¬ 1    πŸ“Œ 0

So excited to share this manuscript led by the inimitable Cara Brand, who discovered that Topoisomerase II evolution causes hybrid female lethality in Drosophila.

Congrats to Cara, @nickbr0wn.bsky.social, Anirban, and
@buszczaklab.bsky.social!

www.biorxiv.org/content/10.6...

23.02.2026 01:43 β€” πŸ‘ 72    πŸ” 37    πŸ’¬ 4    πŸ“Œ 2

Adaptive evolution of Topoisomerase II triggers reproductive isolation in Drosophila https://www.biorxiv.org/content/10.64898/2026.02.20.707007v1

22.02.2026 01:33 β€” πŸ‘ 12    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0

Yay!!! πŸ™Œ πŸŽ‰

22.02.2026 01:21 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Very honored to receive this award from GSA! I have immense gratitude for my advisor @nkwhiteman.bsky.social, labmates, collaborators, mentees, and the fly community, who in many ways potentiated my graduate research.

Looking forward to sharing my work at my favorite meeting in my favorite city!

20.02.2026 22:10 β€” πŸ‘ 39    πŸ” 3    πŸ’¬ 8    πŸ“Œ 1
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Ancient co-option of LTR retrotransposons as yeast centromeres - Nature Evolutionarily related β€˜proto-point’ centromeres providing resolution to the evolutionary origins of point centromeres are identified in yeast, and comparison shows they evolved in an ancestor with re...

Our paper is now out in Nature:

β€œAncient co-option of LTR retrotransposons as yeast centromeres”

www.nature.com/articles/s41...

A short thread on how retrotransposons helped give rise to yeast point centromeres.

1/14

18.02.2026 16:03 β€” πŸ‘ 225    πŸ” 115    πŸ’¬ 8    πŸ“Œ 10
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We’re excited to announce @tarnopol.bsky.social as the recipient of the 2026 Larry Sandler Award! πŸŽ‰ She’ll present the Larry Sandler Memorial Lecture during the #Dros26 opening session on March 4β€”she'll share how her research explores how protein toxins evolve to shape host–parasite interactions.

19.02.2026 17:01 β€” πŸ‘ 17    πŸ” 8    πŸ’¬ 1    πŸ“Œ 1
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πŸ”¬ Recruiting a Postdoc!!!!
I’m looking for a motivated postdoc to join my lab and work on characterizing the role of a heterochromatin protein involved in a sex-ratio meiotic drive system in Drosophila.
If you know someone who might be interested, please share widely!

19.02.2026 17:21 β€” πŸ‘ 14    πŸ” 13    πŸ’¬ 0    πŸ“Œ 0
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my first termite queen extracted from a mature colony in the field 🀩
thanks @tatsuyainagaki.bsky.social

17.02.2026 19:37 β€” πŸ‘ 11    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

How does the piRNA pathway solve the self vs. non-self problem? 🧬

Since piRNAs come from single-stranded RNA, how does the cell choose the right ones? For years, "piRNA clusters" were seen as THE privileged source. But are they really special and earmarked for biogenesis? (1/19)

13.02.2026 15:11 β€” πŸ‘ 88    πŸ” 51    πŸ’¬ 2    πŸ“Œ 4

The demystification of piRNA clusters

if you wonder how cells generate piRNAs specifically against transposons & you are looking for a weekend read

check out @86dominik.bsky.social's opus magna (or Dominik's great thread)

a shared project with the one and only Rippei Hayashi, lab alumnus & friend

13.02.2026 20:39 β€” πŸ‘ 41    πŸ” 18    πŸ’¬ 2    πŸ“Œ 1

If Bad Bunny can cover the history of Puerto Rico, colonialism, transatlantic slavery, hemispheric consciousness, as well as contemporary life and politics in under 14 minutes, you can do your 15- or 20-minute conference presentation with time to spare.

09.02.2026 23:56 β€” πŸ‘ 3012    πŸ” 612    πŸ’¬ 51    πŸ“Œ 86
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Hybrid female sterility due to cohesin protection errors in mouse oocytes Misregulation of chromosome cohesion during female meiosis serves as a reproductive isolating barrier in mice.

Another announcement! πŸ“£ Our work on hybrid incompatibility in cohesin protection in 🐭oocytes is published!! Congrats Warif El Yakoubi and Eddie Pan!!πŸŽ‰ We found hybrids with cohesion errors in two distinct genus.
www.science.org/doi/10.1126/...

07.02.2026 00:51 β€” πŸ‘ 48    πŸ” 24    πŸ’¬ 3    πŸ“Œ 0
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Postdoctoral Research Fellowships in Biology (PRFB)

Holy shit: it's an RFP for the NSF Postdoctoral Research Fellowship in Biology (PRFB). Hello old friend www.nsf.gov/funding/oppo...

05.02.2026 23:41 β€” πŸ‘ 125    πŸ” 74    πŸ’¬ 6    πŸ“Œ 24

Congrats Takashi!!

05.02.2026 19:56 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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New preprint from the lab! We identify the ZnF protein Mulberry as a condensation-dependent structural regulator of genome topology that organizes β€œmulti-way regulatory hubs” in early Drosophila embryos.
www.biorxiv.org/content/10.6...

05.02.2026 10:56 β€” πŸ‘ 39    πŸ” 16    πŸ’¬ 0    πŸ“Œ 0
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Molecular evolution of CO2-sensing ab1C neurons underlies divergent sensory responses in the Drosophila suzukii species group Author summary Animals rely on their senses to locate food sources and identify suitable reproductive sites in their environment. Closely related species can evolve strikingly different preferences as...

Very excited to share the work by Alice Gadau. We found that D. suzukii (the invasive pest that loves ripe fruit) doesn’t hate COβ‚‚, while classic lab flies avoid it. That tiny sensory shift helps explain a big ecological transition.
journals.plos.org/plosgenetics...

29.01.2026 19:50 β€” πŸ‘ 10    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
David's AlphaFold WorkShop 2026
YouTube video by David Fay David's AlphaFold WorkShop 2026

Greetings! I decided to make a YouTube video of my AlphaFold workshop that I've given a few times in the past year. Caveats aside, people seem to find this useful for thinking about how to model protein interactions and how to interpret various AF outputs 1/2

www.youtube.com/watch?v=u63o...

02.01.2026 23:03 β€” πŸ‘ 102    πŸ” 32    πŸ’¬ 2    πŸ“Œ 1
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Evidence for an ancient master sex determination gene in Hymenoptera The vast majority of Hymenopterans determine sex by haplodiploidy, in which males and females develop from haploid unfertilized and diploid fertilized eggs, respectively. At the molecular level, the m...

ANTSR seems to be the ancient master sex determining gene in Hymenoptera (as suggested by Pan et al. 2024)! So rad that a lncRNA is doing this!

www.biorxiv.org/content/10.6...

26.12.2025 17:41 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Intrigued by a long-standing conundrum in small RNA biologyβ€”how nuclear Argonaute proteins silence transposons when they *need* target transcription for their own recruitmentβ€”we studied the piRNA pathway.

And found a hidden RNA-decay axis from Piwi to the RNA exosome.

22.12.2025 18:14 β€” πŸ‘ 98    πŸ” 42    πŸ’¬ 3    πŸ“Œ 5
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Chromosome length is not the sole determinant of sexually dimorphic crossover rates during mammalian meiosis: Insights from genetically diverse mouse strains Meiotic recombination generates crossovers (COs), reciprocal exchanges between homologous chromosomes critical for accurate chromosome segregation. Inappropriate CO frequency and distribution drive an...

So excited to finally share my recent work on sex differences in crossing over using mice from diverse genetic backgrounds!
www.biorxiv.org/content/10.6...

23.12.2025 03:02 β€” πŸ‘ 15    πŸ” 8    πŸ’¬ 0    πŸ“Œ 1
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We won the @trogersresearch.bsky.social TBEP door decoration contest … by a landslide … @willowp.bsky.social @qeenyra.bsky.social Ji @anamcarmo.bsky.social @negberry.bsky.social Veronica & Rafa.

13.12.2025 16:51 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 0    πŸ“Œ 1
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Dynamic evolution of EZHIP, an inhibitor of the Polycomb Repressive Complex 2 in mammals The Polycomb Repressive Complex 2 (PRC2) is an ancient, conserved chromatin-interacting complex that controls gene expression, facilitating differentiation and cellular identity during development. It...

@pravrutharaman.bsky.social got super intrigued about EZHIP/CATACOMB, previously identified as a histone H3K27M mimic of PRC2. You can read about her efforts here: www.biorxiv.org/content/10.6... We hope these analyses will help spur more analyses in this very cool gene! 1/

13.12.2025 22:08 β€” πŸ‘ 82    πŸ” 37    πŸ’¬ 3    πŸ“Œ 1
Dear Mark,

Only three days left to nominate for the Larry Sandler Award! The award recognizes excellent recent graduates who have completed a PhD in Drosophila research. The awardee will receive a fantastic opportunity to present the Larry Sandler Memorial Lecture at the 67th Annual Drosophila Research Conference in Chicago, IL!

The deadline to nominate is Monday, December 15, 2025. 

Nominate Here
For more information visit the website.

Dear Mark, Only three days left to nominate for the Larry Sandler Award! The award recognizes excellent recent graduates who have completed a PhD in Drosophila research. The awardee will receive a fantastic opportunity to present the Larry Sandler Memorial Lecture at the 67th Annual Drosophila Research Conference in Chicago, IL! The deadline to nominate is Monday, December 15, 2025. Nominate Here For more information visit the website.

Fly Friends: The Larry Sandler Award recognizes the PhD student with the most amazing these using Drosophila as a model. Just three days left to nominate someone. For more info on the process and the link to nominations, see:
genetics-gsa.org/drosophila-2...

12.12.2025 17:15 β€” πŸ‘ 12    πŸ” 16    πŸ’¬ 0    πŸ“Œ 1
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Have you ever wondered how new DNA methylation patterns are established?

Paradigm shift ahead! We discovered a new mode of DNA methylation targeting in plants that relies on transcription factors and sequence motifs rather than chromatin modifications to regulate the methylome. rdcu.be/eQ6L5
1/8

11.12.2025 21:56 β€” πŸ‘ 47    πŸ” 23    πŸ’¬ 2    πŸ“Œ 0

so cool!! congrats!!

11.12.2025 05:37 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Phages are full of genes of unknown function that are likely adaptive in specific conditions.
New preprint: Phage TnSeq identifies essential genes rapidly and knocks all non-essentials. We would like to send a pool of phiKZ mutants to anyone wanting it! Reach out
tinyurl.com/bdcfrejh

08.12.2025 15:04 β€” πŸ‘ 90    πŸ” 42    πŸ’¬ 2    πŸ“Œ 2
Systematic analysis of noncanonical ribosomal protein paralogs does not provide evidence for specialized functions in Drosophila

Systematic analysis of noncanonical ribosomal protein paralogs does not provide evidence for specialized functions in Drosophila

So excited to finally be able to share my first paper and the culmination of my PhD work with @felipekteixeira.bsky.social πŸͺ°πŸ”¬

www.pnas.org/doi/10.1073/...

04.12.2025 21:41 β€” πŸ‘ 15    πŸ” 12    πŸ’¬ 3    πŸ“Œ 2
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Rapid compensatory evolution within a multiprotein complex preserves telomere integrity Intragenomic conflict with selfish genetic elements spurs adaptive changes in subunits of essential multiprotein complexes. Whether and how these adaptive changes disrupt interactions within such comp...

How to keep in step when your (protein) partner speeds up…

Here we investigated the adaptive remodeling of a protein-protein interaction surface essential for telomere protection.

Congrats to whole team!

www.science.org/doi/10.1126/...

28.11.2025 17:22 β€” πŸ‘ 120    πŸ” 64    πŸ’¬ 6    πŸ“Œ 4