phy_papers

Mycoheterotrophy and plastid genome evolution in the early-diverging epidendroid orchid tribe Nervilieae: independent transitions in Epipogium and Stereosandra https://pubmed.ncbi.nlm.nih.gov/41674728/

First Plastome Sequences of Two Endemic Taxa of Orbea Haw. from the Arabian Peninsula: Comparative Genomics and Phylogenetic Relationships Within the Tribe Ceropegieae (Asclepiadoideae, Apocynaceae) https://pubmed.ncbi.nlm.nih.gov/41677694/

A phylogenomic and metagenomic meta-analysis of bacterial diversity in the phyllosphere lifts a veil on hyphomicrobiales dark matter https://pubmed.ncbi.nlm.nih.gov/41679088/

Emergence of dual β-lactam and Colistin resistance via bla_FRI-8 and mcr-10.2 co-carriage on an IncFII family plasmid in Enterobacter vonholyi https://pubmed.ncbi.nlm.nih.gov/41679575/

Chloroplast genome sequencing of Poa pratensis and comparative chloroplast genomics analysis with other 29 grass species https://pubmed.ncbi.nlm.nih.gov/41680399/

Nested birth-death processes are competitive with parameter-heavy neural networks as time-dependent models of protein evolution https://pubmed.ncbi.nlm.nih.gov/41676492/

Diversity and evolution of a phase-variable multi-locus antigen in Neisseria gonorrhoeae https://pubmed.ncbi.nlm.nih.gov/41676527/

Integrating morphology and phylogenetics reveals new species, records, and provides an updated checklist of Trichiaceae in China https://pubmed.ncbi.nlm.nih.gov/41678401/

Plant Molecular Phylogenetics and Evolutionary Genomics III https://pubmed.ncbi.nlm.nih.gov/41681526/

FullSynesth: Syntenic Reconciliation of a Set of Consistent Gene Trees https://pubmed.ncbi.nlm.nih.gov/41684729/

The complete chloroplast genome of Calophyllum membranaceum Gander & Champ 1849 (Calophyllaceae, Malpighiales) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41675940/

Complete mitochondrial genome and phylogenetic analysis of the sea anemone Heteractis doreensis (Quoy & Gaimard, 1833) https://pubmed.ncbi.nlm.nih.gov/41675941/

Taxonomic novelties and phylogenetic insights into Cainiaceae (Xylariales, Sordariomycetes) associated with Poaceae hosts from Southwestern China https://pubmed.ncbi.nlm.nih.gov/41676238/

Modular automated high-throughput isolation and phylogenetic identification of bacteria from complex microbiomes https://pubmed.ncbi.nlm.nih.gov/41676442/

Assembly, Characterization, and Phylogenetic Insights from the Complete Mitochondrial Genome of Cleisthenes herzensteini (Pleuronectiformes: Pleuronectidae) https://pubmed.ncbi.nlm.nih.gov/41677686/

First Plastome Sequences of Two Endemic Taxa of Orbea Haw. from the Arabian Peninsula: Comparative Genomics and Phylogenetic Relationships Within the Tribe Ceropegieae (Asclepiadoideae, Apocynaceae) https://pubmed.ncbi.nlm.nih.gov/41677694/

Integrative Taxonomy of Nuchequula longicornis (Teleostei: Leiognathidae) from Chinese Waters: Morphological Analysis, Mitogenomic Characterization, and Phylogenetic Implications https://pubmed.ncbi.nlm.nih.gov/41677731/

Associations of Biotic and Abiotic Factors with Phylogenetic Community Structure Across Temperate Forests in South Korea https://pubmed.ncbi.nlm.nih.gov/41677739/

Molecular detection and phylogenetic characterization of tick-borne pathogens in Anatolian water buffalo (Bubalus bubalis) https://pubmed.ncbi.nlm.nih.gov/41677960/

Phylogenetic evidence reveals the classification and evolutionary history of endemic cavefish in China https://pubmed.ncbi.nlm.nih.gov/41680615/

The Complete Chloroplast Genomic Characteristics and Phylogenetic Analysis of Abutilon theophrasti Medicus https://pubmed.ncbi.nlm.nih.gov/41683633/

A phylogenomic and metagenomic meta-analysis of bacterial diversity in the phyllosphere lifts a veil on hyphomicrobiales dark matter https://pubmed.ncbi.nlm.nih.gov/41679088/

Integrating morphology and phylogenetics reveals new species, records, and provides an updated checklist of Trichiaceae in China https://pubmed.ncbi.nlm.nih.gov/41678401/

Plant Molecular Phylogenetics and Evolutionary Genomics III https://pubmed.ncbi.nlm.nih.gov/41681526/

Revision of Ambisporaceae, with three new genera and one new species and a morphological identification key for all the species currently attributed to this family https://www.biorxiv.org/content/10.64898/2026.02.11.705428v1

Viromics in flat mites from Hawaii shows abundant arrays of viruses, expands the evolutionary origin of plant viruses, and provides a surveillance tool for Brevipalpus-transmitted viruses https://www.biorxiv.org/content/10.64898/2026.02.11.705406v1

Ribonucleotide reductases recapitulate biogeographic patterns within virioplankton according to ocean biogeochemistry https://www.biorxiv.org/content/10.64898/2026.02.11.705308v1

Distinct core minor pilin complexes prime specialized type IV filaments in cyanobacteria https://www.biorxiv.org/content/10.64898/2026.02.12.705559v1

Ecogenomic Diversity of Clavibacter nebraskensis in North America https://www.biorxiv.org/content/10.64898/2026.02.11.705226v1

Divergent disulfide bond architecture defines two IgY subclasses in snakes https://www.biorxiv.org/content/10.64898/2026.02.11.705265v1