Aaron Vogan's Avatar

Aaron Vogan

@fungage-lab.bsky.social

Researches fungal evolution/genetics/genomics. Associate professor at the University of Uppsala, investigating accessory genomes and giant TEs in Fungi.

641 Followers  |  354 Following  |  21 Posts  |  Joined: 10.05.2024  |  1.7959

Latest posts by fungage-lab.bsky.social on Bluesky

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We are inviting applications for a postdoctoral researcher to support the Laboratory of Fungal Ecology and Evolution, and join our project studying obligatory multitrophic interactions. jobs.bc.cas.cz/en/detail/266 #LFEE #LuminaQuaeruntur #postdoc #hiring

31.10.2025 05:28 โ€” ๐Ÿ‘ 1    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start?

We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!

www.biorxiv.org/content/10.1...

29.10.2025 09:02 โ€” ๐Ÿ‘ 62    ๐Ÿ” 37    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
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Jumbo phageโ€“mediated transduction of genomic islands | PNAS Bacteria acquire new genes by horizontal gene transfer, typically mediated by mobile genetic elements (MGEs). While plasmids, bacteriophages, and c...

@prczhaoyansong.bsky.socialโ€™s deep dive into the dark matter of compost communities is now out ๐ŸŽ‰ Genomic islands hijack jumbo phagesโ€”whose capsids enable transfer of large tracts of DNAโ€”shedding new light on the scale & scope of phage-mediated gene flow ๐Ÿ˜Ž

www.pnas.org/doi/10.1073/...

28.10.2025 18:36 โ€” ๐Ÿ‘ 71    ๐Ÿ” 46    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

๐Ÿ“ฃ Iโ€™m excited to share two open positions in my lab @leibniz-hki.de. For this interdisciplinary project with @luziagyr.bsky.social, Iโ€™m seeking (1) an enthusiastic PhD student interested in fungal natural product research and genetic engineering, as well as (2) a technical assistant ๐Ÿ‘‡๐Ÿป

21.10.2025 14:48 โ€” ๐Ÿ‘ 18    ๐Ÿ” 21    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

Including a position in my group to work on Evolutionary Genomics of Fungal pathogens

10.10.2025 16:00 โ€” ๐Ÿ‘ 16    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Open Positions ERC-funded project on the mechanism of horizontal transfer of entire fungal chromosomes PhD PostDoc

Want to understand how entire fungal chromosomes can be horizontally transferred?
Join us to unravel the mechanism/consequences of horizontal chromosome transfer in a fungal pathogen as part of an ERC-funded project. Postdoc/PhD positions available.
fungal-evolutionary-genetics.de/open-positio...

13.10.2025 09:42 โ€” ๐Ÿ‘ 25    ๐Ÿ” 21    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Understanding Host Compatibility in the Marchantia-Phytophthora System (CARELLA_J26DTP) | Doctoral Training Partnership The fossil record demonstrates that filamentous microbes invaded ancient plant cells with intracellular hyphal structures over 450 million years ago. To this day, a rich diversity of extant land plant...

New opportunity to undertake a PhD in my group โฆโ€ชat the John Innes Centre - if youโ€™re interested in plant immunity and evolution check out the link!

12.10.2025 17:30 โ€” ๐Ÿ‘ 46    ๐Ÿ” 62    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Assistant Professor of Plant Pathology University of California, Davis is hiring. Apply now!

My department at UC Davis is hiring a mycologist, broadly interpreted. Please repost, share, and consider applying. recruit.ucdavis.edu/JPF07339

22.09.2025 17:38 โ€” ๐Ÿ‘ 71    ๐Ÿ” 91    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Model for the maintenance of accessory chromosomes by FuSpoks. Triangles represent the toxin function of the proteins, and circles represent the antidote function. Core chromosomes are depicted in grey, with ACs in red. A) A dividing cell within a hyphal tip, expressing a SPOK protein from an AC. B) A dividing cell within a hyphal tip, expressing a SPOK protein from an AC. The AC is lost during mitotic division, resulting in a cell containing Spok toxin, but with no ability to produce Spok antidote. This cell is expected to die.

Model for the maintenance of accessory chromosomes by FuSpoks. Triangles represent the toxin function of the proteins, and circles represent the antidote function. Core chromosomes are depicted in grey, with ACs in red. A) A dividing cell within a hyphal tip, expressing a SPOK protein from an AC. B) A dividing cell within a hyphal tip, expressing a SPOK protein from an AC. The AC is lost during mitotic division, resulting in a cell containing Spok toxin, but with no ability to produce Spok antidote. This cell is expected to die.

Excited to see the final version of our paper on toxin/antidote genes and accessory chromosomes in Fusarium published! Now with new and improved figures! We think that many #fungal ACs might be maintained not because of benefits to virulence, but because of Spok genes. doi.org/10.1093/gene...

22.09.2025 08:51 โ€” ๐Ÿ‘ 12    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Reductive evolution of the DNA replication machinery in endosymbiotic fungi The molecular machinery for replicating and repairing DNA accurately is critically important for life and highly conserved across the Tree of Life. Here we show that two major lineages of fungi, Glome...

Iโ€™m super happy to present the first discoveries of the RIKEN-Cambridge Joint Crop Symbiosis Research Team, based in Japan ๐Ÿ‡ฏ๐Ÿ‡ต

doi.org/10.1101/2025...

A thread ๐Ÿ‘‡

03.09.2025 15:21 โ€” ๐Ÿ‘ 53    ๐Ÿ” 24    ๐Ÿ’ฌ 6    ๐Ÿ“Œ 2
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An opportunity of a lifetime for budding lichenologists. The National Trust and the Royal Botanics, Edinburgh are offering a PAID lichen traineeship in #Scotland! The work programme looks fascinating and a great opportunity to develop skills. Deadline: 3/10/2025. www.asva.co.uk/jobs/trainee...

05.09.2025 13:31 โ€” ๐Ÿ‘ 101    ๐Ÿ” 48    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 5
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Lediga jobb vid Stockholms universitet Jobb

We have several open positions in my group, funded from the ERC Grant on the Early Sequestered Germline of Fungi. We search broadly for applicants at both PhD and master-level, with a dedicated interest in fungal evolutionary biology. Please forward and RT!
Find the positions here: su.varbi.com

07.09.2025 13:13 โ€” ๐Ÿ‘ 51    ๐Ÿ” 52    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Research Associate (PDRA) in Fungal Infection Biology :Oxford Road The Bertuzziโ€™s laboratory at the Manchester Fungal Infection is looking for two outstanding candidates be part of an interdisciplinary team of researchers, working on an Wellcome Trust funded project investigating how Mucorales fungi adapt to natural and in-host environments and how stress adaptation drives infection. The posts are available from the 5th of January 2026 on a full-time basis for 3 years, with the possibility to extend.

JOB ALERT @bertuzzilab.bsky.social is recruiting 2 Research Associates for a project on Mucorales! Very exciting and can definitely recommend working with this group โ˜บ๏ธ

www.jobs.manchester.ac.uk/Job/JobDetai...

07.09.2025 13:04 โ€” ๐Ÿ‘ 8    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Sanctuary: a Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens | mBio The work presented here expands our understanding of a novel group of mobile genetic elements called Starships that facilitate the horizontal exchange of numerous genes between fungal pathogens. Our a...

Delighted that our work on the Sanctuary Starship #transposon is now published! A big thanks to all co-authors, especially to the ever-amazing @mcdonaldmeganc.bsky.social for her mentorship!

doi.org/10.1128/mbio...

06.09.2025 13:11 โ€” ๐Ÿ‘ 28    ๐Ÿ” 14    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Thrilled and honoured to have received an #ERCStG from @erc.europa.eu for my project MobiChrom on horizontal chromosome transfer in fungal pathogens. Weโ€™ll explore key questions: What is the mechanism? How is specificity regulated? Are these selfish elements? Exciting times ahead - job ads soon!

05.09.2025 06:53 โ€” ๐Ÿ‘ 13    ๐Ÿ” 2    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 1

Check out our new paper on adopting a trait-based framework for protist diversity! We make the case for a unified protist trait database, how to build it, and how it could transform research on protist ecology and evolution.
#protistsonsky

03.09.2025 08:47 โ€” ๐Ÿ‘ 56    ๐Ÿ” 26    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
Purple pollen visible in a dissected flower of Linum grandiflorum, flowering flax, an insect-pollinated species.

Purple pollen visible in a dissected flower of Linum grandiflorum, flowering flax, an insect-pollinated species.

*Postdoc in Evolutionary genomics at Stockholm University*
We are recruiting a postdoc for a large interdisciplinary project to investigate evolutionary drivers and genomic consequences of pollen evolution in response to pollination mode shifts in flowering plants. 1/5

su.varbi.com/what:job/job...

02.09.2025 14:20 โ€” ๐Ÿ‘ 78    ๐Ÿ” 93    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
Assistant or Associate Professor - Fungal Biology/Mycology The Department of Plant Pathology in the College of Agricultural and Environmental Sciences (CAES) at the University of Georgia is recruiting for the position of Assistant or Associate Professor in Fu...

Assistant/ Associate Professor of Mycology at UGA - Go be part of a Legendary Fungal Group fungi.franklinresearch.uga.edu and dept of plant pathology plantpath.caes.uga.edu www.ugajobsearch.com/postings/445...

21.08.2025 19:51 โ€” ๐Ÿ‘ 31    ๐Ÿ” 33    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

๐Ÿ“ฃ๐Ÿ„๐Ÿฆ‡๐Ÿ„๐Ÿฆ‡๐Ÿ„๐Ÿ“ฃ
I am looking for a postdoctoral researcher for my lab in Ceske Budejovice, Czechia. We study biodiversity monitoring, ecology, conservation, and microbiology. Some of our work deals with bats, most with fungi! Email at danny dot haelewaters at gmail dot com if interested. #TeamLaboul #newPI

14.08.2025 20:40 โ€” ๐Ÿ‘ 48    ๐Ÿ” 34    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Early germline sequestration in a basidiomycete fungus In sexual organisms, inheritance of new mutations is highly dependent on the timing of germline definition. Here, we used the fairy ringโ€“forming fungus Marasmius oreades to challenge the general assum...

It started as a master thesis project by Markus Hiltunen, and ended up in this publication in Science. What a fun project to work on! Thanks Markus - and all other coauthors, too, for a great team work! www.science.org/doi/10.1126/...

14.08.2025 19:54 โ€” ๐Ÿ‘ 50    ๐Ÿ” 25    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 2
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Research Fellow - Department of Immunology and Immunotherapy - 106119 - Grade 7 The successful candidate will make extensive use of a range of in vivo models of fungal infection and will have access to the wide range of transgenic tools and in vivo immunology techniques establish...

Job ads for TWO postdoctoral positions available in our group are now online. Deadline August 25th.
๐ŸงชImmunologists, apply in link below.
๐Ÿ„Microbiologists- please follow link in next post.
edzz.fa.em3.oraclecloud.com/hcmUI/Candid...

30.07.2025 12:15 โ€” ๐Ÿ‘ 11    ๐Ÿ” 16    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
AI-generated drawing of a woman looking through a microscope with DNA and fungi drawn in the background. The text contains the same content as the bsky post.

AI-generated drawing of a woman looking through a microscope with DNA and fungi drawn in the background. The text contains the same content as the bsky post.

My group at is hiring a PhD student to explore how fungal pathogens that live in the environment will adapt their genomes, acquire new phenotypes, and perhaps even increased infectivity as a result of climate change. Please share!

More info and applications at @ jobs.uni-jena.de/vrbup

29.07.2025 15:41 โ€” ๐Ÿ‘ 46    ๐Ÿ” 47    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
The search for beetlehangers on ladybirds
YouTube video by #TeamLaboul The search for beetlehangers on ladybirds

One of the sampling campaigns of #FunDive, a ๐Ÿ‡ช๐Ÿ‡บ project promoting fungal conservation, focuses on #Hesperomyces, a parasite on ladybirds โ€“ but we need YOU๐Ÿซต! My PhD student @michieldegroot.bsky.social made a video with everything you want to know. youtu.be/HXfhY00U6M4?... #CitizenScience #TeamLaboul

10.01.2025 13:29 โ€” ๐Ÿ‘ 23    ๐Ÿ” 15    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 4
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Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution Nature Communications - Giant transposons, known as โ€˜Starshipsโ€™, mediate horizontal gene transfer between fungal genomes. Here, Sato et al. show that Starships occupy genome regions...

๐Ÿ“ฃ Happy to see the journal publication ๐Ÿ“„ of our work on Starships ๐Ÿš€ in Verticillium fungi: terrific work led by @yukiyosato.bsky.social
rdcu.be/exBSp

24.07.2025 10:40 โ€” ๐Ÿ‘ 104    ๐Ÿ” 56    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 1
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O'Donnell et al. investigated the evolution of Starships - a class of giant transposons - in Aspergillus and Penicillium, finding that domesticated lineages exhibited greater Starship content than relatives from non-human environments.

๐Ÿ”— doi.org/10.1093/gbe/evaf125

#genome #evolution #TEsky

18.07.2025 12:57 โ€” ๐Ÿ‘ 18    ๐Ÿ” 10    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Job opportunity Postdoctoral Researcher (m/w/div) in โ€œMicrobial Infection Strategiesโ€ at Leibniz HKI Jobportal Wissenschaft/Forschung in Jena

๐Ÿ“ฃ Iโ€™m recruiting a #Postdoc to help us further our understanding on the infection strategies of our human fungal pathogen. If youโ€™re enthusiastic about research, our interdisciplinary group @leibniz-hki.de will be a good fit for you! Please share!
jobs.hki-jena.de/jobs/Postdoc...

17.07.2025 05:41 โ€” ๐Ÿ‘ 17    ๐Ÿ” 24    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Model of Starship mediated transfer of the ToxA gene, that is present on a separate mobile element named ToxhAT. Blue: ToxhAT; Green: Starship Horizon; Yellow: Starship Sanctuary.

Model of Starship mediated transfer of the ToxA gene, that is present on a separate mobile element named ToxhAT. Blue: ToxhAT; Green: Starship Horizon; Yellow: Starship Sanctuary.

Curious about how novel #plant #pathogens emerge? Check out our microreview on whether #fungal disease outbreaks are instigated by Starship #transposons. We present three examples that we think are evidence of outbreaks caused by Starship HGT. bsppjournals.onlinelibrary.wiley.com/doi/10.1111/...

15.07.2025 07:21 โ€” ๐Ÿ‘ 35    ๐Ÿ” 18    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0
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Reconstructing NOD-like receptor alleles with high internal conservation in Podospora anserina using long-read sequencing NOD-like receptors (NLRs) are intracellular immune receptors that detect pathogen-associated cues and trigger defence mechanisms, including regulated cell death. In filamentous fungi, some NLRs mediat...

Happy to see this out! "Reconstructing NOD-like receptor alleles with high internal conservation in #Podospora anserina using long-read sequencing", now in โ€ช@microbiologysociety.orgโ€ฌ! ๐Ÿงฌ

Keep reading for a simple explanation ๐Ÿงต 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...

02.07.2025 18:10 โ€” ๐Ÿ‘ 9    ๐Ÿ” 3    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1
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Job alert! We have a postdoc position available in the Stelkens Lab at Stockholm University. Join us and apply experimental evolution and comparative genomics in the model system yeast to test for parallel climate adaptation. Apply through this link: su.varbi.com/en/what:job/... Deadline 15 August.

30.06.2025 13:32 โ€” ๐Ÿ‘ 43    ๐Ÿ” 47    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

After 15 years of research, we're excited to share that the causative agent of White-Nose Syndrome/Disease is actually two cryptic fungal species, each showing host specialisation. We've also traced the introduction to North America back to Podillia, Ukraine.

11.06.2025 15:58 โ€” ๐Ÿ‘ 19    ๐Ÿ” 12    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@fungage-lab is following 20 prominent accounts