Release v1.1.7 · Gaius-Augustus/Tiberius
⚠️ New Models available:
Diatoms
Eudicotyledons
Lepidoptera
Monocotyledonae
Mucoromycota
Saccharomycota
Sordariomycota
Several bugfixes.
With help of international colleagues at @jgi.doe.gov, @oregonstate.edu, and @stockholm-uni.bsky.social, we are relasing new parameters for Tiberius. Thx to Lars Gabriel, @tomasbruna.bsky.social, Samuel Talbot, @chriswheat.bsky.social, @masta.bsky.social - and many others. github.com/Gaius-August...
24.10.2025 18:36 — 👍 6 🔁 2 💬 0 📌 1
Big thanks to @axelvisel.bsky.social for sharing! For full consideration, please apply by September 2.
21.08.2025 00:13 — 👍 2 🔁 1 💬 0 📌 0
pangenome 'expansion' curves for cotton and soybean
Determining presence-absence variation (PAV) across reference genomes is a major goal of pangenome analysis. It turns out that A LOT of gene PAV is due to methodological artifacts.
We explore the causes of this in soybean and cotton datasets in our recent preprint: www.biorxiv.org/content/10.1...
18.08.2025 16:51 — 👍 36 🔁 17 💬 3 📌 2
The Alliance of Genome Resources supports biological science via data integration, standardization of data models and interfaces, and unified outreach.
Find us at https://www.alliancegenome.org.
We explore the natural cycles and basic aspects of Earth sciences that underpin sustainable solutions to the growing need for energy and water resources.
Berkeley Lab, Environmental Genomics and Systems Biology division. #GeneOntology #MonarchInitiative #AllianceGenome #NationalMicrobimeDataCollaborative #OBOFoundry.
Postdoc in Akey Lab, Princeton University
http://arpfennig.github.io
Evolutionary biologist (Multicellularity & social evolution). Prof. at Georgia Tech & Director of the QBioS PhD program.
https://ratclifflab.biosci.gatech.edu/
Official account of Lawrence Berkeley National Laboratory (LBNL), a U.S. Department of Energy national lab. newscenter.lbl.gov
Biologist
Origamist
Martial artist
🇲🇽
Botanist. University of Georgia. Plant evolutionary biology, phylogenomics, comparative genomics.
Faculty Research Assistant for the Center for Quantitative Life Sciences at Oregon State University.
Focused on genome assembly, annotation, and R-gene identification. Vining Lab, Deluc Lab, Bhattarai Lab.
comp bio research scientist @jgi @lbnl
Research, news, and commentary from Nature, the international science journal. For daily science news, get Nature Briefing: https://go.nature.com/get-Nature-Briefing
Genome Scientist. Studies how DNA makes humans, mice, plants, microbes. At Lawrence Berkeley National Lab and Joint Genome Institute. Views are my own.
Postdoc @ DOE Joint Genome Institute
Director of the US Department of Energy Joint Genome Institute. Head of JGI’s Secondary Metabolites Science Program. Research interests are natural products, synthetic biology, microbiome
We are a DOE User Facility providing access to integrative genome science capabilities. Located at Berkeley Lab. Work with us: http://jointgeno.me/proposals_B
EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
Helping to make genomics useful for crop improvement, ecology, evolutionary biology, and conservation
HudsonAlpha Genome Sequencing Center and DOE Joint Genome Institute
