#diphtheria strain taxonomy: Life identification number (LIN) codes for the genomic taxonomy of Corynebacterium diphtheriae strains, by @josefdelgadoblas.bsky.social, Martin Rethoret-Pasty and myself, @biorxivpreprint.bsky.social al @biorxiv-microbiol.bsky.social
23.06.2025 13:28 — 👍 10 🔁 3 💬 2 📌 1
Had a great time in Luxembourg at the first Network meeting of the EURLs for Public Health! Huge thanks to @ecdc.europa.eu for making it possible for our EURL-PH on #diphtheria and #pertussis to meet in person and to connect with fellow EURLs! Looking forward to the next meeting! @pasteur.fr
25.05.2025 15:12 — 👍 5 🔁 2 💬 0 📌 0
Significant respiratory virus activity in the EU/EEA, with #influenza & #RSV epidemics ongoing.
Vaccination campaigns against respiratory pathogens continue in many EU/EEA countries, and people who are eligible for vaccination are encouraged to get vaccinated.
More info: erviss.org
#IDsky #EpiSky
07.02.2025 18:20 — 👍 17 🔁 8 💬 0 📌 2
Spotlight on Klebsiella pneumoniae
In this blog @katholt.bsky.social sheds light on Klebsiella pneumoniae, a major cause of hospital-acquired infections 🦠 and a key player in the global antimicrobial resistance crisis.
📖 Read more: bit.ly/41gOzKF
@lshtm.bsky.social @megancarey.bsky.social @cmcrodrigues.bsky.social
06.12.2024 17:28 — 👍 7 🔁 3 💬 0 📌 0
PubMLST - Public databases for molecular typing and microbial genome diversity
Public databases for molecular typing and microbial genome diversity
BIGSdb v1.49.1 has been released. This version improves the layout of user registration and admin pages, and provides the option to export LIN code prefixes of specified length in the Export plugin. BIGSdb powers the databases on pubmlst.org and bigsdb.pasteur.fr.
github.com/kjolley/BIGS...
26.11.2024 11:22 — 👍 19 🔁 12 💬 0 📌 0
Microscopic photograph of the RSV virus.
Coming up next week - another part of our #GenEpiBioTrain online trainings!
This time we will focus on #RSV with the help of #InstitutePasteur.
The aim is to provide participants with in-depth knowledge of RSV, its genomic diversity, evolution, available treatments, & emerging vaccine strategies.
27.11.2024 09:40 — 👍 16 🔁 7 💬 1 📌 0
Thanks @sylvainbrisse.bsky.social for involving me in KlebNET-GSP as project manager 3y ago, it was a very enriching experience! Thanks to all the attendees of #KLEBS2024 for making this a great success, it was our best reward! And thanks to the @gatesfoundation.bsky.social for making it possible!
23.11.2024 11:48 — 👍 21 🔁 5 💬 3 📌 0
Will do the same soon! 😉
23.11.2024 09:55 — 👍 1 🔁 0 💬 0 📌 0
Molecular biologist at the University Hospital Brussels laboratory of microbiology, with a special focus on toxigenic corynebacteria and B. pertussis.
Professor of infectious disease epidemiology and modelling at Institut Pasteur, Paris. Transmission, epidemic dynamics and forecasting, seroepidemiology, vaccines and NPIs, respiratory and vector born diseases, zoonoses, Public Health. #IDSky
Bacterial Immunity and Synthetic Biology enthusiast. Head of Lab at Institut Pasteur. Co-Founder of Eligo Bioscience.
EURL-PH-DIPE is an EU funded nonprofitable project. The main objective of EURL-PH-DIPE is to support ECDC and the national reference laboratories to tackle diphtheria and pertussis in Europe.
Postdoctoral researcher at Intistut Pasteur | MSCActions | Vet | Plasmid Biology, Bacterial Evolution & Antimicrobial Resistance
Member National Academy of Medicine, Distinguished Professor (Emeritus), University of California, Davis. Leader, Author, One Health Advocate, Scientist, and Consultant.
MSc Pharm, PhD | ECDC Fellow alumni Health Microbiology (EUPHEM) | AMR | Integrated Surveillance | Capacity Building | Language kabelsalat | Photography enthusiast
Research Fellow at University of Glasgow. Pathogen genomics for planetary health | genomic surveillance |phylogenetics | nanopore
bacterial genomics・antibiotic resistance https://klebnet.org
Researcher | Molecular epidemiology & evolution | Disease ecology | Transmission dynamics & spatial epidemiology | Molluscs
Postdoc researcher at Institut Pasteur | Bacterial genomics | Evolution, ecology and diversity of bacterial populations
Mum to 👦🏻👶🏻. Senior Research Fellow at the Centre for Genomic Pathogen Surveillance, University of Oxford. Bacterial genomes and AMR 🧬 🦠 Love running and the outdoors 🏃🏼♀️🌿
Swiss girl living in Scottland 🏴🇨🇭| Evaluation & Epidemiology at UKHSA| #AMR & #OneHealth | Science, Public Health, Global Health, Climate, Nature | she/her | Views my own
Postdoc in the Maiden Lab at Uni of Oxford • Population biology & genomics • ECR Prokaryotic division rep for Microbiology Society 🦠
PhD in Molecular Biology and NGS specialist working at Biomics sequencing core facility of @institupasteur
Nanopore and microbiome lover.
Genomicist 🧬 at the intersection of bioinformatics 💻, epidemiology🫂 and global public health 🌍
Organisme public 🇫🇷 de recherche pluridisciplinaire, le Centre national de la recherche scientifique c'est 33 000 personnes qui font avancer la connaissance. #HelloESR
🧬La science pour la santé
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