similar scenario for height. even though the common genetics is "saturated" the height range one person could be based on their PRS is very wide. (which is of course a separate argument compared to using PRS to stratify people)
08.08.2025 09:14 β π 1 π 0 π¬ 0 π 0
nice summary thanks Andrea. I wonder if this challenge will become easier in a few years if and when clinicians inform a young adult patient they would like to "do" their genetics at the same time as their first blood pressure/FEV/LDL-cholesterol etc test.
07.08.2025 13:47 β π 0 π 0 π¬ 0 π 0
Parent-of-origin effects on complex traits in up to 236,781 individuals - Nature
A novel multistep strategy reveals how parent-of-origin effects shape complex traits in large-scale biobanks.
DirigΓ©e par @zkutalik.bsky.social et @rjhfmstr.bsky.social Γ la @fbm-unil.bsky.social, au @sib.swiss et Γ #unisantΓ©, une nouvelle Γ©tude publiΓ©e dans @nature.com prΓ©sente une mΓ©thode computationnelle innovante pour Γ©tudier ces effets liΓ©s Γ lβorigine parentale.
π www.nature.com/articles/s41...
07.08.2025 09:42 β π 7 π 3 π¬ 1 π 0
Best of British : Black Sabbathβs Paranoid played by the Coldstream guards to commemorate Ozzy Osborne
02.08.2025 15:17 β π 1 π 0 π¬ 0 π 0
well done part I @erinltempleman.bsky.social
01.08.2025 09:41 β π 1 π 0 π¬ 0 π 0
Does it even make sense to compare PGS to proteomic risk scores though ? one is a once in a lifetime assay that costs about $40. the other....is not. The most relevant comparison for proteomic scores is likely to be routine biochemistry ?
16.07.2025 13:22 β π 0 π 1 π¬ 1 π 0
The Pope Song by Tim Minchin would be a controversial choice
14.07.2025 17:33 β π 1 π 0 π¬ 0 π 0
3rd Test, Lord's, July 10 - 14, 2025, India tour of England (Ravindra Jadeja 61*, Shoaib Bashir 1/6, ENG vs IND live score, 3rd Test, day 4, Lord's, London, July 10 - 14, 2025
Check England vs India 3rd Test 2025 live cricket score from London. Get the live score updates and ball by ball commentary of ENG vs IND 3rd Test, 2025. Fastest scorecard and detailed analysis of the...
Which sports (and formats) come closest to test match cricket where no runs / points / goals / scores are being made but the tension and adrenaline levels are so high (for players and spectators alike )? www.espncricinfo.com/series/india...
14.07.2025 17:32 β π 0 π 0 π¬ 0 π 0
true. given the input and outputs involved maybe the MRC and WT will chip in :-)
07.07.2025 15:33 β π 0 π 0 π¬ 0 π 0
Wow. Amazing investigative journalism: observer.co.uk/news/nationa...
06.07.2025 13:57 β π 0 π 0 π¬ 0 π 0
We probably should be more upfront with the mechanism and research argument. If large % of population are sequenced we have a "human laboratory" regardless of the personalised/stratified medicine argument.
06.07.2025 10:22 β π 0 π 0 π¬ 1 π 0
Preventing premature deaths through polygenic risk scores
Background Polygenic risk scores (PRS) have demonstrated predictive validity across a range of cohorts and diseases, but quantifying their clinical utility remains a challenge. As PRS can be derived f...
this is a decent summary www.medrxiv.org/content/10.1... I am not sure but i think some of the reticence about PRS is that we are used to only thinking about one condition at a time, but for Β£40 one off test, PRS make a small difference across multiple conditions for most people.
06.07.2025 10:20 β π 0 π 0 π¬ 2 π 0
Exciting, but wish the hype was dialled back. "This will enable identification & intervention for individuals at high risk of developing common diseases" probably better as "cheap once in lifetime test will nudge many people over & under certain thresholds for interventions.
05.07.2025 07:49 β π 4 π 2 π¬ 2 π 0
is the uptick from 2008 a Harry Potter / Alex Rider effect ? re the non relationship stuff (not unique to boys? but girls mature earlier argument....), there is loads of stuff. Young James Bond, the Charlie Higson series about zombies, hunger games etc
04.07.2025 09:38 β π 0 π 0 π¬ 0 π 0
Congrats Adriaan.
04.07.2025 09:29 β π 1 π 0 π¬ 0 π 0
Supermarkets could face fines for failing healthy eating targets in obesity crackdown
Labour health secretary issues warning over future of health service βunless we curb the rising tide of cost and demandβ caused by obesity epidemic
interesting non-personalised medicine experiment about to happen in UK. Supermarkets will be asked to report data on sales & incentivised to increase healthier food sales, in ways they choose, using their extensive longitudinal data on our purchasing behaviour www.independent.co.uk/news/uk/poli...
29.06.2025 08:40 β π 2 π 0 π¬ 0 π 0
Lausanne Comp Bio Symposium 2025 (cbiosymposium.unil.ch)
π Abstract deadline 30 June (π πππ²π¬ ππ¨ π π¨!!!)
π€ Oral presentation notifications: 7 July
β
Early Bird registration deadline: 11 July
π° Registration fee for non-PI: 150 CHF
27.06.2025 10:00 β π 8 π 8 π¬ 0 π 0
timing does seem weird, & hyperbole dialled up to 11, but i read it as referring to common as well as rare diseases, which are mainly adult-onset but not all, notably 50% of Type 1 diabetes. Did the CPM discussions include implications for common later onset disease ?
22.06.2025 12:44 β π 0 π 0 π¬ 1 π 0
I have just heard from a US visitor from San Diego. She discussed PhD students in her lab. US citizens of chinese and african ancestry. One a military veteran. Both have received knocks on the door with officials asking them for their birth certificates.
19.06.2025 14:00 β π 0 π 0 π¬ 1 π 0
Mikeβs on his next trip after we were lucky enough to host him in Geneva for a few hours . It was great to hear his measured and inspiring take on polygenic risk scores .
19.06.2025 13:21 β π 2 π 2 π¬ 1 π 0
I think itβs patients presenting either to clinical genetics services with severe rare conditions or being part of common disease cohorts and Biobanks. WES and WGS in 100,000s starting to plus the gap but only just getting going
14.06.2025 19:35 β π 1 π 0 π¬ 0 π 0
there's that big gap between MAF 0.01 and 0.001 again...
14.06.2025 09:00 β π 4 π 1 π¬ 1 π 0
YouTube video by Mike Adams
The Beach Boys - God only knows (1966) fully restored video
Sad news. This song blew Paul McCartney away at the time apparently. I guess we're going to have to get used to this as the heroes of 1960s pop travel through their 80s (if they made it past 27) www.youtube.com/watch?v=lpd4...
11.06.2025 17:24 β π 0 π 0 π¬ 0 π 0
One of the things that is getting better.....
09.06.2025 09:35 β π 3 π 0 π¬ 0 π 0
Yes. Seems to be the answer.
08.06.2025 19:24 β π 0 π 0 π¬ 0 π 0
PhD student in prediction of Type 1 Diabetes, University of Exeter π§¬π©βπ»
Senior researcher & data scientist developing methods in statistical human genetics (Aarhus, Denmark)
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Transforming genomics research into solutions for Canada | Transformer la recherche en gΓ©nomique en solutions pour le Canada genomecanada.ca | genomecanada.ca/fr
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Researcher in pharmacogenetics epidemiology | University of Exeter, UK
epidemiologist interested in sleep, cancer and women's health
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Prof of EBM @UniOxford, author, Bad Science person, more... I run http://bennett.ox.ac.uk making tools+papers from data http://OpenSAFELY.org http://OpenPrescribing.net
Professor Univ. of Copenhagen, Vice Director Novo Nordisk Foundation Center for Basic Metabolic Research, Metabolic Signaling, glucose metabolism, AMPK
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Group leader @metabolcenter.bsky.social and affil. with @broadinstitute.org Center for Genomic Mechanisms of Disease. Interested in brain control of metabolism using #hypothalamus #in-vivo/vitro/silico-models #singlecell #genetics #machinelearning.
Statistical Geneticist, Group leader at University of Lausanne/Unisante, father, climber, runner
Geneticist, global health, evolution and human disease, higher education
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Health Economist | Nuffield Department of Primary Care Health Sciences, Oxford
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Stanford professor. Interested in human genetics, statistical modeling, entrepreneurship.
https://rivaslab.stanford.edu