Michael Plank

Michael Plank

@michaelplanknz.bsky.social

Professor of Applied Mathematics at the University of Canterbury, NZ. Fellow @royalsocietynz.bsky.social. Math modelling in biology and epidemiology. Bicycles make the world a better place. He/him https://www.math.canterbury.ac.nz/~m.plank/

2,651 Followers 1,696 Following 1,053 Posts Joined Aug 2023
3 hours ago
How do we evaluate modelling work, and what does that imply about modelling responsibly? – Evaluation & responsibility in infectious disease modelling

<< How do we evaluate infectious disease modelling work, and what does that imply for modelling responsibly? >>

If that sounds interesting, you're very welcome to join us!

* Workshop: Evaluation & Responsible Modelling
* 24 March 2026 | LSHTM, London

More @ epiforecasts.io/responsible-...

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17 hours ago

100%. And that thus far it appears to be a minority (not zero; there's some good solid reporting out there) who can is quite depressing. & an indictment of those in the majority.

Facts from an expert body. Spin from politicians. If their job isn't holding one up to the other for us what is it?

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17 hours ago

We don't need, and crucially cannot trust, politicians to summarise RC reports and tell us what the findings were. If we could we wouldn't need RCs

We have the report itself and journalists for that summary role.

The news value of pol reaction is simply how honest those reactions are

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4 hours ago

I do like a niche Jeff Bridges reference

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6 hours ago

And the covid reporting dashboard has been updated from 19 deaths reported in the (as of now) week before last, to 5 reported last week.
But, to keep shouting at the void, this tells us nothing about the progression of the current wave, as the reporting is now but the events were July last year.

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1 day ago
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COVID inquiry phase two: 4 main lessons to improve NZ’s future pandemic resilience The second COVID inquiry report reinforces that pandemics are not only health emergencies but also social crises, requiring attention to cohesion and equity.

NZ released the COVID inquiry (phase two), with four main lessons and recommendations calling for better integration of disease surveillance systems, expansion of epidemiological modelling capability, and more structured decision-making frameworks during a crisis theconversation.com/covid-inquir...

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23 hours ago
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COVID inquiry phase two: 4 main lessons to improve NZ’s future pandemic resilience The second COVID inquiry report reinforces that pandemics are not only health emergencies but also social crises, requiring attention to cohesion and equity.

Nice summary by David Murdoch
COVID inquiry phase two: 4 main lessons to improve NZ’s future pandemic resilience
theconversation.com/covid-inquir...

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1 day ago
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Mandates, lockdowns, billions spent: The key findings of the Covid inquiry phase 2 report The report ultimately reasons that decisions made at the time were “balanced and reasonable”.

Excellent summary of the inquiry findings here from Emma Ricketts at Stuff as well.

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1 day ago
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Covid inquiry phase two - Expert Reaction - Science Media Centre The Royal Commission on COVID-19 has outlined more lessons on "making the best decisions in the worst of circumstances". The report makes 24 formal recommendations, including: framing the elimination...

Covid inquiry phase two – Expert Reaction

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1 day ago
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I must admit I'm surprised at how little the Royal Commission gave to vaccine opponents, some of whom saw this process as the thing that would vindicate them. Can't get much clearer than this.

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23 hours ago

It varies but 100 contact hours would be pretty normal in my department

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1 day ago

Excellent TLDR of part 2 of NZ's Covid-19 Inquiry by @marcdaalder.bsky.social
1. Vaccine safety & approvals process successful
2. Some mandates lasted too long or went too far
3. The need for a changed testing strategy could have been foreseen
4. Lockdown decisions were ‘reasonable & evidence-based’

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2 days ago
nature Vol 455| 25 September 2008| doi:10.1038/nature07231
LETTERS
Neutralizing antibodies derived from the B cells of
1918 influenza pandemic survivors
Xiaocong Yu1
*, Tshidi Tsibane2
*, Patricia A. McGraw1
, Frances S. House1
, Christopher J. Keefer1
, Mark D. Hicar1
,
Terrence M. Tumpey3
, Claudia Pappas2,3, Lucy A. Perrone3
, Osvaldo Martinez2
, James Stevens3,4, Ian A. Wilson4
,
Patricia V. Aguilar2
, Eric L. Altschuler5
, Christopher F. Basler2 & James E. Crowe Jr

I'd like to spend a minute discussing this paper because it is frequently abused to make erroneous claims about the nature of the human immune system and our capacity to resist respiratory viruses:

rdcu.be/e7un8

A thread 🧵

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4 days ago

Yes I agree

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4 days ago

Maybe but I also think there was some misunderstanding that they were necessarily inferior to PCR whereas, once elimination was over, they were in some ways preferable

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4 days ago

😍 Stunning, rakiura is truly a special place

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5 days ago

The Covid-19 pandemic was a once-a-century impact on mortality worldwide. And that impact varied among countries depending on policy choices.

BUT

As bad as the height of pandemic was in Canada (purple arrow) it would be far worse to have the misfortune to be born an American (green arrow).

1/

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6 days ago
Lecturer / Postdoctoral Fellow in Applied Mathematics or Statistics (2-year fixed-term) - University of Canterbury | Te Whare Wānanga o Waitaha

🎓We are advertising three 2-year research+teaching positions in applied maths or stats.

These have a reduced teaching load (50 lectures a yr) compared to a standard academic position so applicants can gain teaching experience while having time for research

jobs.canterbury.ac.nz/jobdetails/a...

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6 days ago

New Zealand is extremely fortunate to be less dependent on gas than many countries. Let's keep it that way.

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6 days ago
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Govt's census shake-up advances despite 'unreliable' data concerns Labour confirms it will back polarising changes through the first stage of the legislative process – but is reserving the right to kill the bill

See lengthy Comment by ex-chief of Statistics for both NZ and UK, Len Cook.

Using only admin data is like going back to blocky low-res graphics. Sub-populations get blurry.

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6 days ago
Lecturer / Postdoctoral Fellow in Applied Mathematics or Statistics (2-year fixed-term) - University of Canterbury | Te Whare Wānanga o Waitaha

🎓We are advertising three 2-year research+teaching positions in applied maths or stats.

These have a reduced teaching load (50 lectures a yr) compared to a standard academic position so applicants can gain teaching experience while having time for research

jobs.canterbury.ac.nz/jobdetails/a...

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6 days ago

Relevant meme from our blog post on the topic: www.the100.ci/2024/12/05/w...

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1 week ago
Screenshot of the "Does that use a lot of energy?" online app

Hannah Ritchie has built a fun little tool where you can compare energy usage of various products and activities.

This is super helpful imho, because it's so hard to develop intuitions even just about the scales involved here.

hannahritchie.substack.com/p/does-that-...

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1 week ago
The Conservatives are, after all, well placed to know a lot about this morass, since they introduced it. In 2012, the coalition government launched the Plan 2 system of student loans and raised university fees across Britain to £9,000 per annum. To put Plan 2 in simple terms, loan repayments were laid out via a seemingly innocuous series of calculations. The first to consider is the threshold at which repayments begin. If you left education with, say, £27,000 worth of debt, you would only start paying it back once you met a predetermined salary. On its face, this might not seem like a particularly onerous demand. “Low-earning” graduates would avoid being saddled with repayments before they were financially able to begin making them, while their “high earning” peers could start chipping away at their debt, and provide an income stream for the state. As any of my fellow literature or history graduates will tell you, however, the devil is in the details. For one thing, the threshold at which someone becomes a high earner was never particularly high and, following years of inflation, is now preposterously low. Rachel Reeves’ announcement that the government are freezing the threshold at April 2026 levels (£29,385) for a further three years only makes this worse. The real living wage for London is currently calculated at £28,860, which means that any London-based graduate making just £40 more per month than the minimum needed to live there will automatically begin paying their debt. In real terms, this means practically any graduate in any form of full-time work will be paying as much as 9 per cent of their income to the state, and for a very, very long time. Worse still, the amount owed by those graduates below the threshold does not remain static – it accrues interest, year on year, whether you’re working for low wages, volunteering, taking a career break or on maternity leave, ensuring that if you do pass the threshold some time later, you will be returning to find your original £27,000 much enlarged. If the state’s attitude to what constitutes “high earnings” makes you think it’s oblivious to the concept of inflation, let me put your mind at ease. When it comes to the calculation of student loan interest, they are very conscious of inflation indeed. Each year, the interest charged on student loans is calculated by two components. The first is the Retail Price Index (RPI), which generally records a higher number than the Consumer Price Index (CPI). Governments prefer the latter, lower figure for many of their other calculations, just not when it comes to adding extra debt to every graduate in the country. To this is added a second component, a percentage tied to each graduate’s earnings, meaning that as your salary increases so too does the interest you’re paying on the loan you took out. If you think this seems like a predatory and punitive way to bilk students for as much money, and over as long a period of time, as possible, then you’re just about up to speed on this scandal, which amounts to a regressive stealth tax on every graduate in the UK. One which, it’s calculated, you would need to be earning £66,000 per year to pay off in anything like a timely fashion.

The debt burden of UK students is one of those things where, the more you look into the details, the more insane and predatory it is. So I tried my best to explain the numbers involved without making my, or your, head explode.

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1 week ago

Suppose you know that x+y=100 and want to know what x and y are. You’re stuck right – there’s a whole range of possibilities for two numbers that sum to 100 (in maths we call this non-identifiability).

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1 week ago
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How well did this year's flu shot work?

Interim results: Decently, not perfect.

"the risk of medically-attended influenza A(H3N2) illness was reduced by 40% among vaccinated relative to unvaccinated individuals."

tinyurl.com/emw36bfa by Separovic et al., in @eurosurveillance.org

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1 week ago

We'd be in a better place if university leaders would constantly beat this drum. Teaching critical thinking makes for better neighbors and citizens, while creating knowledge for knowledge's sake has driven massive economic gains, often in unpredictable ways. Interfering with this is folly.

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1 week ago

Thanks Tyler Cassidy for leading the charge on this, the excellent team of co-authors, and to @matrix-inst.bsky.social for hosting us.

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1 week ago
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A Nonparametric Approach to Practical Identifiability of Nonlinear Mixed Effects Models - Bulletin of Mathematical Biology Mathematical modelling is a widely used approach to understand and interpret clinical trial data. This modelling typically involves fitting mechanistic mathematical models to data from individual tria...

Well it turns out if you know something about the distributions of x and y, you *can* (sometimes) separately estimate their population means.

We explored some biological applications of this idea here:
doi.org/10.1007/s115...

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1 week ago

Now suppose you don’t just have one measurement of x+y but many, clustered around 100 but with some variation.

How does this help? Surely x=y=50 is just as likely as x=10 and y=90?

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