Saskia Hiltemann ๐Ÿ's Avatar

Saskia Hiltemann ๐Ÿ

@shiltemann.bsky.social

Bioinformatics Post-Doc Uni Freiburg, Coordinator of the Galaxy Training Network, DataPLANT data steward, lover of cats, space, crochet, puzzles, CTFs & more Be excellent to each other! She/her ๐Ÿณ๏ธโ€๐ŸŒˆ

157 Followers  |  241 Following  |  5 Posts  |  Joined: 08.01.2024  |  2.0138

Latest posts by shiltemann.bsky.social on Bluesky

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We concluded the second day with two exciting workshops:
โ€ขScience illustration with Michal Rรถssler (freelancer), and
โ€ขIntroduction to bioinformatic tools related to the evolution of land plants with @dvarshney.bsky.social and @shiltemann.bsky.social (from @watertoland.bsky.social).

02.04.2025 16:30 โ€” ๐Ÿ‘ 9    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology Abstract. Numerous conceptual frameworks exist for best practices in research data and analysis (e.g., Open Science and FAIR principles). In practice, ther

๐Ÿš€ New paper alert! ๐Ÿš€

Excited to share latest #Galaxy #Ecology work in GigaScience:

"Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology" ๐ŸŒฟ๐Ÿ”ฌ

๐Ÿ”— Read it here: academic.oup.com/gigascience/...

#OpenScience @galaxyproject.bsky.social

28.03.2025 09:59 โ€” ๐Ÿ‘ 4    ๐Ÿ” 3    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
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This week we will have our 3rd internal DOMPS Symposium. We are really looking forward to it, so here is the schedule as teaser. Find out more about the keynote speakers and workshops on the website.
dompssymposium.wixsite.com/domps

31.03.2025 08:30 โ€” ๐Ÿ‘ 6    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Another useful website to find out which products and brands NOT to buy:
isitamerican.eu
#BuyEuropean ๐Ÿ‡ช๐Ÿ‡บ๐Ÿ’ช๐Ÿ‘

09.03.2025 10:05 โ€” ๐Ÿ‘ 11    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Great GTN & Galaxy Hackathon by the SPOC community and ELIXIR-UK! Thanks to @nomadscientist.bsky.social for leading the effort!

@elixiruknode.org @galaxyproject.bsky.social #galaxyproject

14.02.2025 17:45 โ€” ๐Ÿ‘ 2    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

SPOC HDR UK ELIXIR-UK CoFest 2025: How did it go?

Read more at https://training.galaxyproject.org/training-material/news/2025/02/14/spoc_hdr_cofest.html

@galaxyproject.bsky.social

14.02.2025 17:31 โ€” ๐Ÿ‘ 2    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

The 2025 #scicomm award of the @molplantsci.bsky.social section of @plantsciencedbg.bsky.social goes to @somssich.bsky.social - congratulations! You might know Marc by his plant science starter kit and his plant science classics post. #MBP2025

12.02.2025 14:03 โ€” ๐Ÿ‘ 21    ๐Ÿ” 3    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

Short reminder ๐ŸŒฑ

The International Plant EVO-DEVO symposium "Evolution of Plant Reproduction" organized by
@icips.bsky.social

will take place near the botanical garden of Berlin (Germany) from March 25-28, 2025.

To register, go to: dfg-icips.org/berlin2025/

Deadline registration: 14.02.2025

11.02.2025 10:23 โ€” ๐Ÿ‘ 0    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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European Galaxy Days (EGD) European Galaxy Days meeting in Autumn 2025

The Freiburg Galaxy Team is happy to announce this year's European Galaxy Days https://galaxyproject.org/events/2025-10-01-egd2025/ . Please mark you calendar: October 1st to 3rd

We are looking forward seeing you in Freiburg !

#UseGalaxy #GalaxyProject #UniFreiburg #EOSC

10.02.2025 14:48 โ€” ๐Ÿ‘ 8    ๐Ÿ” 11    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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@shiltemann.bsky.social and Deepti Varshney from @uni-freiburg.de giving insights into DataPLANT, MAdLand, and Galaxy: Tools and Resources for Plant Research @ #MBP2025 in Hennef ๐ŸŒฑ

11.02.2025 15:43 โ€” ๐Ÿ‘ 19    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Galaxy Galaxy is a community-driven web-based analysis platform for life science research.

@shiltemann.bsky.social and Deepti Varshney on computational plant science tools developed in the framework of @nfdi4plants.bsky.social @watertoland.bsky.social @galaxyproject.bsky.social usegalaxy.eu @uni-freiburg.de
#MBP2025

11.02.2025 16:04 โ€” ๐Ÿ‘ 6    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Great list of European alternatives to popular US tech services (e.g. cloud computing, file hosting, maps, translation, messaging, and much more)

european-alternatives.eu/categories

23.01.2025 17:35 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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microGalaxy: A gateway to tools, workflows, and training for reproducible and FAIR analysis of microbial data Microbial research generates vast and complex data from diverse omics technologies, necessitating innovative analytical solutions. microGalaxy (Galaxy for Microbiology) addresses these needs with a us...

Our new preprint "microGalaxy: A gateway to tools, workflows, and training for accessible, reproducible, and FAIR microbial data analysis" is live! ๐ŸŽ‰

๐Ÿ“ Read it here: www.biorxiv.org/content/10.1...

#Microbiome #FAIRdata #usegalaxy @galaxyproject.bsky.social

08.01.2025 12:16 โ€” ๐Ÿ‘ 28    ๐Ÿ” 15    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

Have a look at your GTN community wrapped for 2024!

Happy Holidays!

20.12.2024 16:04 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Galaxy at SURF Research Cloud workshop Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.

Attention Dutch Researchers! Join the half-day workshop at SURF on January 28, 2025 to learn how to deploy your own Galaxy on the SURF Research Cloud.

Followed by drinks and networking with the Galaxy-NL community!

More info: training.galaxyproject.org/events/2025-...

@galaxyproject.bsky.social

19.12.2024 12:41 โ€” ๐Ÿ‘ 1    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Plant Biologists and How to Find Them? We are Dr Joanna Kacprzyk and Dr Rainer Melzer from School of Biology and Environmental Science at University College Dublin, Ireland. Our project Plant Biologists and How to Find Them? aims to invest...

A survey on why people want to study and work with plants: please participate and share <3

forms.gle/btg9GP1L3CTh...

03.12.2024 11:57 โ€” ๐Ÿ‘ 34    ๐Ÿ” 40    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 5
Diagram of the TAPscan v4 workflow

Diagram of the TAPscan v4 workflow

Proud to share TAPscan v4, automated annotation of 138 TF families; code, webtool and database available online.
@watertoland.bsky.social @nfdi4plants.bsky.social @jandevries.bsky.social @shiltemann.bsky.social
doi.org/10.1111/tpj....

13.12.2024 06:25 โ€” ๐Ÿ‘ 42    ๐Ÿ” 23    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Credit where it's due: GTN Reviewers in the spotlight We would like to recognise and thank all of the reviewers who have contributed to the GTN tutorials; your efforts are greatly appreciated, and we are grateful for your contributions to the GTN communi...

Credit where itโ€™s due: GTN Reviewers in the spotlight

We would like to recognise and thank all of the reviewers who have contributed. Today, we are highlighting your efforts across every learning material in the GTN
https://training.galaxyproject.org/training-material/news/2024/12/02/reviewing.html

03.12.2024 13:38 โ€” ๐Ÿ‘ 4    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Awesome picture :)

01.12.2024 08:08 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Yes! Alt text is useful and quickly becomes second nature to do. But when one forgets (as I sometimes do), the prompting is a big help.

20.11.2024 14:15 โ€” ๐Ÿ‘ 627    ๐Ÿ” 126    ๐Ÿ’ฌ 20    ๐Ÿ“Œ 1

Bluesky now has over 20M people!! ๐ŸŽ‰

We've been adding over a million users per day for the last few days. To celebrate, here are 20 fun facts about Bluesky:

19.11.2024 18:19 โ€” ๐Ÿ‘ 131508    ๐Ÿ” 16261    ๐Ÿ’ฌ 3098    ๐Ÿ“Œ 1410

Teamwork makes the Dream work

19.11.2024 18:44 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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MGnify amplicon pipeline v5.0 on Galaxy Porting the MGnify Amplicon Pipeline v5.0 to Galaxy: A Collaborative Effort with EBI

The MGnify Amplicon Pipeline v5.0 is now live on Galaxy!
With 5 modular sub-workflows, this pipeline gives you the flexibility to analyze microbiome data your wayโ€”covering QC, rRNA-prediction, ITS analysis, and more.

galaxyproject.org/news/2024-11...

18.11.2024 18:00 โ€” ๐Ÿ‘ 4    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I made a blocklist for some of the new showing up to troll anti trans folks. No oxygen for these schmoes! bsky.app/profile/did:...

18.11.2024 23:25 โ€” ๐Ÿ‘ 7725    ๐Ÿ” 2746    ๐Ÿ’ฌ 971    ๐Ÿ“Œ 280
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Early bird registration for GCC2024 is now open!
Join us in the beautiful city of Brno, Czech Republic, from June 24th to 29th, 2024, for an unforgettable experience of learning, collaboration, and networking.

Register and learn more: galaxyproject.org/events/gcc20...

17.01.2024 17:24 โ€” ๐Ÿ‘ 1    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Attending #PAG31? Be sure to stop by Pacific H-I to see a couple of our community members present at the "Teaching Genetics, Genomics, Biotechnology, and Bioinformatics" workshop today starting at 4 PM!
-> plan.core-apps.com/pag_2024/eve...

13.01.2024 16:48 โ€” ๐Ÿ‘ 8    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@shiltemann is following 19 prominent accounts