what a cool story, congrats!!!
05.08.2025 03:05 β π 2 π 0 π¬ 1 π 0@fritzroth.bsky.social
Opinions here are my own. Day job: Professor and Chair, Computational & Systems Biology, University of Pittsburgh School of Medicine https://rothlab.csb.pitt.edu/ Systematically testing impacts of genetic change & mapping protein interaction dynamics
what a cool story, congrats!!!
05.08.2025 03:05 β π 2 π 0 π¬ 1 π 0I'm excited to announce our new biorxiv preprint, wherein we investigate the evolution of the weirdest genetic locus I've ever seen! Behold the tgr genes of the social amoeba, which mediate self/non-self discrimination during facultative multicellularity π
π§΅ 1/
www.biorxiv.org/content/10.1...
Finally official π₯³
www.cs.cmu.edu/news/2025/ca...
Metformin, the first line drug for Type 2 diabetes, has been used for 60 years without a clearcut mechanism of action. It turns out it's not just reducing glucose output from the liver. Metformin also works via the brain www.science.org/doi/10.1126/...
31.07.2025 18:52 β π 328 π 95 π¬ 3 π 6Here is the bill (I haven't had time to read it)
www.appropriations.senate.gov/imo/media/do...
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If the multi-year funding model is allowed, then even a flat NIH budget could work out effectively to a 60-75% reduction in projects funded next year :(
31.07.2025 19:58 β π 9 π 1 π¬ 1 π 0Per a question to the chair from Senator Durbin: $400 M increase in the bill.
31.07.2025 16:19 β π 39 π 8 π¬ 0 π 0π§ͺ Senate appropriators say: NIH's budget gets a... boost!
Rather than 40% cut, NIH gets a $400M *increase* in the Senate committee bill for FY26 (about +1%).
"Congress has your back," said @murray.senate.gov.
ADVOCACY MATTERS! There's still a long road (esp in the House), so keep up pressure.
New Publication:
Whole Genome Sequencing of "Mutation-Negative" Individuals With Cornelia de Lange Syndrome
@uoe-igc.bsky.social
doi.org/10.1155/humu...
Another Bhattacharya email today
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The Illusion of Polygenicity in Poolseq studies: Insufficient Power Can Mask Simple Genetic Architectures https://www.biorxiv.org/content/10.1101/2025.07.23.666414v1
24.07.2025 16:33 β π 1 π 1 π¬ 0 π 0The #CIHR Microbiology and Infectious Disease panel had a 13% success rate in Project Grant decisions released last week. Overall success was just over 15% across all panels. Worst success rate in recent memory. This is not what seizing the moment or investing in the future looks like.π¨π¦π #canpoli.
23.07.2025 18:21 β π 2 π 2 π¬ 1 π 0π§ͺ
22.07.2025 01:16 β π 7 π 1 π¬ 0 π 0Interested in using functional data to understand clinical variants? Been hunting for a good review of the topic? We just wrote one! rdcu.be/exaEU
21.07.2025 19:33 β π 67 π 31 π¬ 0 π 1Litigation update
The appeal for a stay in the APLU and AG NIH grant termination cases is DENIED.
Next stop...likely SCOTUS.
Anti-arbitrary and -capricious
20.07.2025 14:53 β π 0 π 0 π¬ 1 π 0When a microscope facility user asks about how to make a red/green overlay
14.07.2025 09:34 β π 71 π 8 π¬ 5 π 0π§ͺπ₯οΈπ§¬ It's here!! Our second MPRA, which is totally different from the first. For starters, there's no human sequences anywhere!
Instead there's marsupials, wolves, pandas and a lot of hard work from lab members past & present, chief amongst them @navya-shukla.bsky.social (looking for a postdoc btw)
Professors: be sure to wait until AFTER tenure is granted to start tagging the local underpasses with motivational graffiti.
12.07.2025 11:50 β π 96 π 7 π¬ 2 π 01/27 We have a new paper out! Turns out that snowflake yeast have been hiding a secret from us - they've evolved a (very!) crude circulatory system. Not with blood vessels or a heart, but through spontaneous fluid flows powered by their metabolism. π§ͺπ¬
www.science.org/doi/full/10....
Yesterday, marked 1 month since we sent the #BethesdaDeclaration.
So, has anything changed? π§΅ 1/n
Does anyone know of an immigration lawyer in Pennsylvania who may be willing to do some pro bono work for a student who is being detained by DHS? This student was finalizing their green card application and was taken a week ago. Please hit me up.
07.07.2025 15:15 β π 15 π 24 π¬ 0 π 0Super excited to share our new review paper - The role of untranslated region variants in Mendelian disease!
www.nature.com/articles/s41...
Ever craved a review that details the diverse mechanisms through which UTR variants have been show to cause rare disease??? Or maybe just curious?
Well this review, written by the amazing Dr @nechamawieder.bsky.social , is for you π€π§¬π©Ί
5/Now, 5 out of 7 of the province's largest school districts can't make ends meet and have been placed under provincial supervision.
This pattern says way more about Doug Ford's strategy of underfunding Ontario's kids than it does about those individual school boards and their staff.
Weβve got two exciting VESS speakers lined up for July 1 π€©
ποΈDaniel Zimmerman postdoc @pittdeptofmed.bsky.social
ποΈFrederik Filip Vinggaard StΓ¦ger @ffstaeger.bsky.social postdoc at Univ. of Copenhagen
Info + Zoom link: varianteffect.org/seminar-series
#Genetics #MedicalGenetics #FunctionalGenomics
New β¬94M research centre for protein design will open at the University of Copenhagen and be led by Dek Woolfson
Funded by the Novo Nordisk Foundation, the centre will operate across the Departments of Biology and & Drug Design and Pharmacology
novonordiskfonden.dk/en/news/new-...
We have co-organized a MAVE course with Wellcome Connecting Science! Meeting is in November, but the
ποΈπApplication deadline is 18 August 2025 β°https://coursesandconferences.wellcomeconnectingscience.org/event/multiplex-assays-of-variant-effects-maves-approaches-analysis-and-interpretation-20251123/
This is... amazing! Kudos to Harvard and NIH for having invested in its Stem Cell Institute since it was established more than 20 years ago.
21.06.2025 18:31 β π 3 π 0 π¬ 2 π 0I have been meaning to share this story all week (but it has been busy)...
[Free with registration]
defector.com/an-interview...
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