79. American citizen.
28.09.2025 17:07 β π 24010 π 11763 π¬ 1997 π 1371@jeffmaltas.bsky.social
Studying therapy resistance through the lens of complex systems, ecology, and evolution. Current Jake Scott postdoc @ Cleveland Clinic Former Kevin Wood graduate student @ Michigan
79. American citizen.
28.09.2025 17:07 β π 24010 π 11763 π¬ 1997 π 1371π¨ Microbiologists! We are recruiting Assistant / Associate Professors in 3 collaborative areas of our U. Pittsburgh School of Medicine.
1) MMG (my dept): fundamental research in med micro
2) Peds ID / I4Kids institute
3) Center for Vaccine Research
π to all 3 w/info: www.linkedin.com/posts/vaughn...
Interested in doing a PhD in #MatOnco next year? Our department at @moffittnews.bsky.social is a great place to do research and we offer fully-paid tuition and fees. Apply before the deadline 12/1 at Moffitt.org/CancerPhD
21.09.2025 01:40 β π 2 π 4 π¬ 0 π 1I found this to be just as evident with reading. I spent some time having AI summarize new papers. I found it did a decent job! Only a month later I had retained none of the information of those papers. I had spent no time milling with the ideas, figures, or experiments. Useless.
19.08.2025 17:39 β π 3 π 0 π¬ 0 π 0I am really happy to share that there will be a @nitmb.bsky.social workshop next year on mathematical and biological features of evolutionary game theory.
It was really fun to co-organize this workshop with Olivia Chu, Alex McAvoy, and @jplotkin.bsky.social.
www.nitmb.org/evolutionary...
1/27 We have a new paper out! Turns out that snowflake yeast have been hiding a secret from us - they've evolved a (very!) crude circulatory system. Not with blood vessels or a heart, but through spontaneous fluid flows powered by their metabolism. π§ͺπ¬
www.science.org/doi/full/10....
When the filter is removed (change to non-selective environment), a higher dimensionality of pleiotropic effects becomes apparent.
The study finds no evidence for this hypothesis, and instead supports the "pleiotropic shift" model.
My understanding is this is correct. In their pleiotropic expansion model, the mutations all have a broad inherent pleiotropy, but the selective environment acts as a filter, allowing only a low-dimensional subset to be relevant for fitness in that environment.
19.06.2025 06:04 β π 0 π 0 π¬ 1 π 0The idea would be a sphere is perfectly captured by the l=0 harmonic, while less spherical shapes will required increasingly higher order harmonics to accurately describe. Maybe more resolution/information than surface area vs volume, but less intuitive to interpret for readers.
28.05.2025 23:53 β π 2 π 0 π¬ 1 π 0This might be something that decomposing the shape into its spherical harmonics could do quite well.... It's kind of like how a Fourier transform breaks a complex signal down into sines and cosines, but it's breaking a 3D shape down into orthogonal shapes on a sphere.
28.05.2025 23:53 β π 3 π 0 π¬ 1 π 0Really cool! Congratulations!
19.05.2025 06:24 β π 1 π 0 π¬ 0 π 0Ba6, c4, Rf3, b3, Rf8
Black looks really good but after c4 gumming up the nice mate, I'd find a way to lose this :)
I'm incredibly honored by this opportunity to serve as President-Elect of @asm.org starting this summer. Looking forward to working with the Board, ASM leadership ,and staff to help advance the microbial sciences. I'm also glad to share my Vision statement, please join us!
asm.org/Press-Releas...
Thanks Willem!
20.01.2025 21:51 β π 1 π 0 π¬ 0 π 0WhatsApp is owned by Meta, the company behind Facebook, Instagram and, most recently, firing all their content moderators for political expediency.
So this is a reminder to download Signal, a free messenger run by a nonprofit which is like WhatsApp but more secure and private: signal.org
Really great new work from the always interesting @csabapallab.bsky.social lab!
14.01.2025 08:55 β π 3 π 0 π¬ 0 π 0For what it's worth, chrome and firefox both have extensions to high google AI, which is typically what I have going on.
10.01.2025 00:05 β π 2 π 0 π¬ 0 π 0Google search AI results for "highest dn/ds evolution measured" showing improved results.
Google AI is horrible. You alter the search even a little bit and the answer is dramatically different. I wish duckduckgo was a slightly better search engine.
10.01.2025 00:04 β π 4 π 0 π¬ 1 π 0As a final note, I just want to drop a shout out to Anh (not on bsky) who helped make this possible after I graduated. She did some important experiments during the revision process and she's a truly spectacular scientist.
09.01.2025 10:28 β π 0 π 0 π¬ 0 π 0As a result, collateral profiles are highly dynamic/variable through evolutionary time and we need a stochastic control model to optimize treatment. To do with we adapted our 2019 Markov Decision Process model to include temporally varying state profiles!
09.01.2025 10:28 β π 1 π 0 π¬ 1 π 0We see that adaptation to antibiotics results in near uniform collateral resistance, further adaptation results in both collateral sensitivity and resistance. This is very similar to recent work from @grantkinsler.bsky.social @petrovadmitri.bsky.social in their yeast two-step paper (also in PLOS B)!
09.01.2025 10:28 β π 2 π 1 π¬ 1 π 0Very excited to have this paper officially out. This one is pretty special... Unfortunately, @kevinwoodum.bsky.social passed away when this paper was in its final stages. He was my biggest supporter, and I miss him deeply as a mentor and friend.
09.01.2025 10:28 β π 27 π 14 π¬ 2 π 0Joe Scally 4 times?
20.11.2024 22:55 β π 1 π 0 π¬ 0 π 0NSF makes you say who you got conflicts (coauthored) with. We (really just Jordan Matelsky) just built you a tool for that. Literally one click: bib.experiments.kordinglab.com/nsf-coa
11.11.2024 20:11 β π 678 π 318 π¬ 84 π 72Incredibly honored to have participated! Thank you @seanmcarroll.bsky.social .
18.11.2024 14:12 β π 26 π 6 π¬ 2 π 1You were great on this episode, Brandon! And got shout outs to seascapes and evolutionary game theory!
19.11.2024 02:44 β π 3 π 0 π¬ 0 π 0Have you found a good starter pack for general evolution and ecology? Iβve only found cancer evolution.
08.11.2024 23:09 β π 1 π 0 π¬ 0 π 0