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Sam Scarpino

@scarpino.bsky.social

Scientist. Director of AI + Life Sciences and Professor of Public Health, Health Sciences, & Computer Sciences at Northeastern University. External Professor at the Santa Fe Institute and Vermont Complex Systems Institute. scarpino.github.io

5,470 Followers  |  586 Following  |  236 Posts  |  Joined: 12.05.2023
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Posts by Sam Scarpino (@scarpino.bsky.social)

"The Cyclops," painted by Odilon Redon, 1914. Via Wikipedia

"The Cyclops," painted by Odilon Redon, 1914. Via Wikipedia

The origin of our eyes over half a billion years ago is looking more and more weird--from a cyclops to four eyes to two. Here's my story (gift link): nyti.ms/4rzisQP

23.02.2026 16:38 โ€” ๐Ÿ‘ 129    ๐Ÿ” 31    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 2
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a paper clip with a face on it is sitting on top of a piece of paper . Alt: a paper clip with a face on it is sitting on top of a piece of paper .
11.02.2026 16:20 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

So you've only prepared half the slides??? Better get moving!

09.02.2026 23:12 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Quick reminder that itโ€™s NOT too late to get your flu shot.
Influenza B cases are risingโ€”which is typical around this time of respiratory virus season. Cases will likely continue to climb for a few more weeks.

07.02.2026 00:34 โ€” ๐Ÿ‘ 25    ๐Ÿ” 12    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2
Building a Grounded Approach to AI in Public Health Surveillance
YouTube video by PEI Innovation Forum Building a Grounded Approach to AI in Public Health Surveillance

AI requires good data. Public health requires good. Linking the two presents huge challenges and opportunities. I joined Oliver Morgan, WHO Director of Pandemic and Epidemic Intelligence Innovation, on his podcast to talk about how we can meet this moment. youtu.be/kC1uLIkmpo0?...

06.02.2026 17:05 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Thanks so much for hosting me! Youโ€™ve got an incredible set of students, faculty, and staff!!!

05.02.2026 14:04 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
NYT spelling bee claiming that gabagool isnโ€™t a word.

NYT spelling bee claiming that gabagool isnโ€™t a word.

Michael Scott from the office trying to order gabagool at an Italian restaurant

Michael Scott from the office trying to order gabagool at an Italian restaurant

Fine @nytimes.com, Iโ€™ll have spaghetti with a side salad.

01.02.2026 13:23 โ€” ๐Ÿ‘ 8    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Interpreting Breakthrough Infections Given Assortative Mixing of Partially Vaccinated Populations Declining vaccine coverage across the United States has increased the risk of outbreaks of vaccine-preventable diseases. Even when vaccines have low primary failure rates, conventional epidemic theory...

In a new preprint, we combine modeling with school-level vaccine data to contextualize the risk of 'breakthrough infections' and impacts on the ongoing US measles outbreak. #idsky #episky

www.medrxiv.org/content/10.6...

27.01.2026 14:34 โ€” ๐Ÿ‘ 50    ๐Ÿ” 22    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 7

๐Ÿ’ฏ๐Ÿ’ฏ๐Ÿ’ฏ

26.01.2026 00:53 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Person cross country skiing in Boston in front of a red building

Person cross country skiing in Boston in front of a red building

Weโ€™ve reached the urban skiing stage of our winter storm in Boston!

25.01.2026 21:15 โ€” ๐Ÿ‘ 10    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Google search results for Curt Cignetti. The top now says โ€œYup, he won.โ€

Google search results for Curt Cignetti. The top now says โ€œYup, he won.โ€

:chefs_kiss: Google

22.01.2026 11:23 โ€” ๐Ÿ‘ 5    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Role of behaviour change in controlling the 2022 Paris mpox outbreak Nature Health - Behaviour changes, rather than vaccination or postinfection immunity, best explained the sudden decline of mpox cases among men who have sex with men during an outbreak in the Paris...

*New paper in Nature Health*

Why did the 2022 mpox outbreak in Paris decline so abruptly?

rdcu.be/eZ24H

21.01.2026 15:13 โ€” ๐Ÿ‘ 31    ๐Ÿ” 12    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Committee Releases Conferenced Defense, Homeland Security, Labor, Health and Human Services, Education, and Related Agencies, and Transportation, Housing and Urban Development, and Related Agencies Bi... United States Senate Committee on Appropriations

The conference (agreement between House and Senate) appropriations bill that includes HHS and NIH was released this morning.

www.appropriations.senate.gov/news/majorit...

1/5

20.01.2026 15:55 โ€” ๐Ÿ‘ 95    ๐Ÿ” 75    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 11
Polymerase mutations underlie early adaptation of H5N1 influenza virus to dairy cattle and other mammals - Nature Communications Avian influenza jumped from wild birds into dairy cattle. Here, the authors report that two mutations in the viral polymerase helped the virus to quickly adapt to cattle. Mutations increased the polym...

Really excited our paper about how H5N1 rapidly adapted to cattle (and how these adaptations also increased its ability to infect cells from the human respiratory tract) is now published! www.nature.com/articles/s41...

20.01.2026 14:10 โ€” ๐Ÿ‘ 85    ๐Ÿ” 44    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 3
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Looks like itโ€™s gonna be another banner aurora night if itโ€™s clear where you are

19.01.2026 22:12 โ€” ๐Ÿ‘ 17    ๐Ÿ” 4    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1
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Tylenol during pregnancy is safe without increased risk of autism, ADHD, or intellectual disability of offspring
A new review of the evidence just out
www.thelancet.com/journals/lan...

16.01.2026 23:43 โ€” ๐Ÿ‘ 1439    ๐Ÿ” 516    ๐Ÿ’ฌ 23    ๐Ÿ“Œ 20
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@kyriakikalimeri.bsky.social & Elisa Omodei come together for a rare joint session at NetSci Conference 2026. Their research draws on real-world data, exploring how network and computational social science can address societal issues.
tinyurl.com/4t5p46yr

13.01.2026 17:06 โ€” ๐Ÿ‘ 11    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

โค๏ธโค๏ธโค๏ธ

13.01.2026 14:45 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Adaptive behaviors neutralize bistable explosive transitions in higher-order contagion During contagion phenomena, individuals perceiving a risk of infection commonly adapt their behavior and reduce their exposure. The effects of such adaptive mechanisms have been studied for processes ...

Adaptive behaviors neutralize bistable explosive transitions in higher-order contagion arxiv.org/abs/2601.05801

12.01.2026 08:03 โ€” ๐Ÿ‘ 2    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Building More Resilient Teams: A Mathematical Approach Using Hypergraphs When organizations need to assign people to projects, they face a fundamental challenge: how can they form teams that continue to function if someone becomes sick, leaves the company, or is otherwise ...

Our new paper on searching the space of hypergraphs to solve constrained combinatorial optimization problem is out. This was joint work with Guilherme Ferraz de Arruda, Wan He, Nasimeh Heydaribeni, Tara Javidi, and Yamir Moreno.

communities.springernature.com/posts/buildi...

11.01.2026 19:00 โ€” ๐Ÿ‘ 9    ๐Ÿ” 5    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

an apizza?

11.01.2026 22:25 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

๐Ÿ”ฅ๐Ÿ”ฅ๐Ÿ”ฅ

09.01.2026 21:24 โ€” ๐Ÿ‘ 7    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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09.01.2026 18:17 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Now that weโ€™re back, I want to promote this awesome work from our group led by former UG Researcher, Gillian Patton (now a Ph.D student at Wash U) published in Evol. Letters!

We blocked a first step mutation that typically promotes biofilm formation to see how this roadblock influences evolution.

07.01.2026 16:47 โ€” ๐Ÿ‘ 6    ๐Ÿ” 1    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

๐Ÿ’ฏ๐Ÿ’ฏ๐Ÿ’ฏ

07.01.2026 18:48 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

IU winning a national championship is my Turing Test.

02.01.2026 01:09 โ€” ๐Ÿ‘ 5    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
SIR of susceptible, infectious, and recovered compartments with individuals who take short "trips" to other locations away from home, plus diagram of four phylogenetic patterns of host-mediated infection (resident-to-resident, visitor-to-resident, resident-to-visitor, visitor-to-visitor).

SIR of susceptible, infectious, and recovered compartments with individuals who take short "trips" to other locations away from home, plus diagram of four phylogenetic patterns of host-mediated infection (resident-to-resident, visitor-to-resident, resident-to-visitor, visitor-to-visitor).

New preprint modeling pathogen phylogeography, where infected hosts spread disease through short "trips" between locations. Very fun collaboration with the brilliant @albertchristian.bsky.social and Ammon Thompson.

www.medrxiv.org/content/10.6...

31.12.2025 21:00 โ€” ๐Ÿ‘ 28    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

This is awesome!

18.12.2025 18:00 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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McMaster research team digitizes more than 100 years of Canadian infectious disease data The new, publicly accessible database contains more than a million infectious disease incidence counts dating back to 1903.

This is a really cool project, I was lucky to have the opportunity to participate.

news.mcmaster.ca/mcmaster-res...

18.12.2025 17:41 โ€” ๐Ÿ‘ 43    ๐Ÿ” 14    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 2
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Weโ€™re excited to announce ๐—จ๐—น๐—ฟ๐—ถ๐—ธ ๐—•๐—ฟ๐—ฎ๐—ป๐—ฑ๐—ฒ๐˜€ as an Invited Plenary Speaker at @netsciconf.bsky.social 2026! โœจ A leader in social network science & visualization, his work spans centrality, clustering, & more recently sports analytics using network-based approaches to football.
www.netsci2026.com/speakers

18.12.2025 16:06 โ€” ๐Ÿ‘ 13    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0