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@toddfallesen.bsky.social

49 Followers  |  240 Following  |  10 Posts  |  Joined: 20.11.2024  |  1.882

Latest posts by toddfallesen.bsky.social on Bluesky

A large group of adults and children are engaging in various activities, including some using hula hoops, outside a large building in the sun.

A large group of adults and children are engaging in various activities, including some using hula hoops, outside a large building in the sun.

We’re looking forward to welcoming families to Discovery Day tomorrow πŸŽ‰

It’s going to be a hot and sunny day, so please come prepared with hats, sun cream and water.

Visit the webpage for more information about the day ⬇️
πŸ”— www.crick.ac.uk/whats-on/dis...

20.06.2025 10:46 β€” πŸ‘ 13    πŸ” 6    πŸ’¬ 0    πŸ“Œ 0
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Protocol for immunofluorescence detection and quantification of phosphorylated SMAD proteins in human blastocysts The transforming growth factor Ξ² (TGF-Ξ²) signaling superfamily includes NODAL and bone morphogenetic protein (BMP) signaling, which lead to the phosph…

Our protocol with all the details you'll need to detect and quantify phospo-SMAD proteins in your (human) embryo, is finally out today @cp-starprotocols.bsky.social.
Thanks again to my wonderful co-author @toddfallesen.bsky.social and the @niakanlab.bsky.social.
www.sciencedirect.com/science/arti...

28.05.2025 09:42 β€” πŸ‘ 8    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

Need help with Cellprofiler? Ask me and others in the upcoming event!

13.01.2025 17:28 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Great talk by Aastha Mathur from @eurobioimaging.bsky.social about community initiatives. Was really interesting to see the parallels between that and what's going on at @elixir-uk.bsky.social last week.

#cbias2024

26.11.2024 12:18 β€” πŸ‘ 6    πŸ” 2    πŸ’¬ 0    πŸ“Œ 1
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What a great All Hands! co-hosted with our members at Cardiff University.
Check this out. What a great pic of our community with our funders, scientific and industry advisory board and potential collaborators πŸ‘‡

21.11.2024 16:29 β€” πŸ‘ 16    πŸ” 6    πŸ’¬ 0    πŸ“Œ 3
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Oh man, I'll never get away.
Haseeb Qureshi showing soke tracking tools for microtubules.

#cbias2024

26.11.2024 10:56 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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@guijacquemet.bsky.social ending with a couple slides on why you should submit your image analysis tools to Journal of Cell Science, and how you can get some training grants for microscopy from the @biologists.bsky.social

#cbias2024

26.11.2024 10:46 β€” πŸ‘ 29    πŸ” 10    πŸ’¬ 0    πŸ“Œ 0
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Microfluidic setup showing that attachment is flow rate dependent. #CBIAS2024 cell tracks analysed with CellTracks Colab notebook. www.biorxiv.org/content/10.1... #CBIAS2024

26.11.2024 10:30 β€” πŸ‘ 4    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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And now a talk from the superstar of cancer cell live imaging @guijacquemet.bsky.social ! Shedding the light on cancer cell extravasation with all you can dream of: #tooldev, #livetracking, #microfludics, #deeplearning
This is some very good stuff !
#CBIAS2024

26.11.2024 10:25 β€” πŸ‘ 13    πŸ” 2    πŸ’¬ 0    πŸ“Œ 0

Opportunity cost of spending a week while conda builds napari on your laptop

26.11.2024 10:30 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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@guijacquemet.bsky.social showing off some tools before getting started, and highlighting those who worked on them.

For image analysis tracking, seems like a great QR code to save!

#cbias2024

26.11.2024 10:22 β€” πŸ‘ 9    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1

Matlab > napari πŸ˜‰

26.11.2024 10:11 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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I'm glad that I'm not the only one who likes using MATLAB still for making guis!

Gebhard Stopper great talk on tracking cancer cells at #cbias2024

26.11.2024 10:09 β€” πŸ‘ 7    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Very impressive tech bite from @normanrz.bsky.social at @webknossos.bsky.social
webknossos.org
#CBIAS2024

25.11.2024 14:33 β€” πŸ‘ 2    πŸ” 1    πŸ’¬ 0    πŸ“Œ 0
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It's a beautiful day to attend #CBIAS2024! Don't be late for my 9:30 talk, be there or be square

26.11.2024 09:07 β€” πŸ‘ 44    πŸ” 3    πŸ’¬ 0    πŸ“Œ 1
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Quickly followed by Rolf Harkes of Netherlands Cancer Institute on Predicting cell types from H&E using multiplex imaging and deep learning. Can AI give pathologists a helping hand? #CBIAS2024 pathologists want to be able to discuss with the model and the model cannot make clinical decisions.

25.11.2024 14:10 β€” πŸ‘ 2    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0
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Correlative imaging to overlay histological and multiplex 46 channel fluorescence data. Segment images and classify cells, then overlay back on H&E data. Harnessing citizen science for benchmarking #CBIAS2024

25.11.2024 14:17 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
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Not looking for a needle in a hay stack but for nodes in a bundle of axons and not doing it by hand! #CBIAS2024

25.11.2024 14:39 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
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Now on stage at #CBIAS2024: Assaf Zaritsky on the visual interpretation of image-to-image transformation models used for virtual fluorescence labeling from phase-contrast images

25.11.2024 15:46 β€” πŸ‘ 20    πŸ” 5    πŸ’¬ 0    πŸ“Œ 1
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Another case of organelle
segmentation from unlabelled bright field images, but few applications and multiple reasons for the problems. #CBIAS2024

25.11.2024 15:47 β€” πŸ‘ 3    πŸ” 2    πŸ’¬ 1    πŸ“Œ 0

Scared the training data out of me!

25.11.2024 16:42 β€” πŸ‘ 3    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Audience participation not just through asking questions but also by catching the throwable mic. #CBIAS2024

25.11.2024 16:25 β€” πŸ‘ 9    πŸ” 3    πŸ’¬ 2    πŸ“Œ 0
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@laurawiggins13.bsky.social

Great talk on deciphering and classifying DNA topology from AFM.

First thing I was reminded of was a recent physics world article! As I'm a IOP nerd too physicsworld.com/a/spot-the-k....

#cbias2024 #instituteofphysics

25.11.2024 14:08 β€” πŸ‘ 5    πŸ” 3    πŸ’¬ 0    πŸ“Œ 0
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Good thing the #CBIAS2024 organizers sent a plan to reach the @thecrick.bsky.social , I almost missed the tiny building

25.11.2024 09:21 β€” πŸ‘ 56    πŸ” 7    πŸ’¬ 3    πŸ“Œ 1
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Get involved in the image analysis community by responding to this survey forum.image.sc/t/2024-image... #CBIAS2024

25.11.2024 10:44 β€” πŸ‘ 4    πŸ” 3    πŸ’¬ 1    πŸ“Œ 0
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Crick BioImage Analysis Symposium 2024

Register now for the Crick Bioimage Analysis Symposium 🧫

We’ll be joined by leading experts to discuss the latest tools and techniques of image analysis and explore their future potential.

#CBIAS2024

πŸ“… 25-26 November
🎟️ Online and in-person tickets

www.crick.ac.uk/whats-on/cri...

11.11.2024 16:07 β€” πŸ‘ 41    πŸ” 19    πŸ’¬ 0    πŸ“Œ 4

@toddfallesen is following 19 prominent accounts