Feels surreal to say but: I'm hiring! If you are or know anyone interested in looking at the evolution of phage resistance using A. baumannii and natural transformation, then this might be for you
www.jobbnorge.no/en/available...
@peterfineran.bsky.social
Prof. and Head of Phage-host interactions (Phi) lab. Phage defences, counter-defences, CRISPR-Cas, toxin-antitoxin. FRSNZ / James Cook Fellow
Feels surreal to say but: I'm hiring! If you are or know anyone interested in looking at the evolution of phage resistance using A. baumannii and natural transformation, then this might be for you
www.jobbnorge.no/en/available...
Stoked to finally have a preprint out for Phold, our tool that uses protein structural information to enhance phage genome annotation #phagesky 1/n
www.biorxiv.org/content/10.1...
Can leaf MICROBES help protect MAIRE TAWAKE from MYRTLE RUST? In our next Rangahau Rising kΕrero @hanareiaehau.bsky.social shares research into the microbiome of this endangered tree and what it could mean for forest resilience in Aotearoa
Wed 20 Aug | 12β1 PM | Zoom
π Register: tinyurl.com/25x2jwae
Ready to lead pioneering research that bridges systems-level investigations of biological systems to molecular mechanism? The EMBL Molecular Systems Biology Unit in Heidelberg is hiring a Group Leader!
30.07.2025 15:14 β π 71 π 78 π¬ 1 π 1First preprint from the Nemudryi Lab! πΎ
In this work, we link antiviral immunity in bacteria and humans by showing that homologs of human Schlafen nucleases protect bacteria from phages.
www.biorxiv.org/content/10.1...
π¦ π§ββοΈFrom bacterial to human immunity.
We report in @science.org the discovery of a human homolog of SIR2 antiphage proteins that participates in the TLR pathway of animal innate immunity.
Co-led wt @enzopoirier.bsky.social by D. Bonhomme and @hugovaysset.bsky.social
www.science.org/doi/10.1126/...
1/16 New pre-print from the Sternberg Lab!
We uncover how temperate phages can use RNA-guided transcription factors to remodel the flagellar composition of their bacterial host and enhance their fitness.
Find the preprint and full story here: tinyurl.com/mshwjd77
π Exciting news! Weβre launching three fully-funded postdoc positions for "New Horizons for Synthetic Phagesβ
Join us in tackling antimicrobial resistance with cutting-edge synthetic biology + AI bioinformatics. Based at Flinders Uni in vibrant Adelaide.
π Read on for details!
#Phage
Was great to be hosted recently by Rafa Pinilla-Redondo in Copenhagen. Fun mini symposium and meet new people and friends and colleagues.
19.07.2025 22:10 β π 7 π 0 π¬ 0 π 0A new preprint led by Sonomi Yamaguchi in our lab describes a bacterial anti-phage defense system named Clover that uses nucleotide signals to both activate and inhibit host immunity.
www.biorxiv.org/content/10.1...
Astounding new structure of a nucleotide immune signal degrading enzyme. The field has found enzymes with this function that look like nucleases, enzymes that look like nucleotide binding proteins, even enzymes that look like proteases... but never a fold like this!
www.biorxiv.org/content/10.1...
Preprint: βStructural modeling reveals viral proteins that manipulate host immune signalingβ
Using AI-guided structural modeling, we find new families of viral proteins that sequester or cleave host immune signaling molecules
Congrats Nitzan Tal!
www.biorxiv.org/content/10.1...
Here we show how the type III signalling molecule SAM-AMP is bound and degraded by a specialised lyase enzyme encoded in cellular and phage genomes. More great work by @haotianchi.bsky.social and the team. @uniofstandrews.bsky.social
academic.oup.com/nar/article/...
Fantastic visit to @w-u-r.bsky.social to celebrate the amazing career and achievements of John van der Oost. He is a huge influence and contributor to the #crispr field. I had a great sabbatical here (some years ago). So fun to see friends and collaborators again!
15.07.2025 01:25 β π 4 π 0 π¬ 1 π 0Link to access the paper led by recent PhD graduate Marina Mahler www.sciencedirect.com/science/arti...
13.07.2025 04:15 β π 4 π 1 π¬ 1 π 0Great timing a couple of weeks ago where I got to present our work on the discovery of new phage DNA modifications and their implications for phage defence at #EESMicrobiology one hour after the paper came out in @cp-cellhostmicrobe.bsky.social! Fantastic conference!
13.07.2025 04:15 β π 8 π 2 π¬ 2 π 0It's been a great few days hosting Eugene Koonin in St Andrews @uniofstandrews.bsky.social , where he was awarded an honorary degree in recognition of his stellar contributions to molecular biology and comparative genomics. Here with @tatianadimitriu.bsky.social
04.07.2025 09:02 β π 47 π 5 π¬ 2 π 0Great to see this comprehensive work on phage DNA arabinosylation & defense finally out! π§¬π«βοΈ A major collaborative effort & stellar PhD work by Marina Mahler, whom I had the pleasure of co-supervising at Otago π©π»βπ¬ @peterfineran.bsky.social @universityofotago.bsky.social @cellpress.bsky.social #mm
26.06.2025 22:44 β π 8 π 1 π¬ 0 π 0π³π³
Phage arabinosyl-hydroxy-cytosine DNA modifications result in distinct evasion and sensitivity responses to phage defense systems
www.cell.com/cell-host-mi...
@peterfineran.bsky.social
#phage #phagesky
Thanks @vivekmutalik.bsky.social!
28.06.2025 08:40 β π 1 π 0 π¬ 0 π 0Great collaboration with Suzanne Warring, Hazel Sisson @peterfineran.bsky.social and others to combat kiwifruit canker via an endolysin-lipase chimera, grateful to be involved, check it out here: www.jbc.org/article/S002...
13.05.2025 07:38 β π 3 π 2 π¬ 0 π 0Really excited to share our resource and analysis of AlphaFold-predicted monomers and homodimers across viruses and phages. Project driven by fab PhD student @rodai.bsky.social and with our great collaborators Joana Pereira @joanampereira.bsky.social and @ninjani.bsky.social
19.05.2025 06:37 β π 66 π 33 π¬ 0 π 1I will be recruiting new postdocs with start dates end 2025 - early 2026. If you'd like to work at the Pasteur Institute in the heart of Paris surrounded by amazing scientists, reach out to discuss possible projects on SynBio / Bacterial Immunity!
18.05.2025 15:19 β π 85 π 79 π¬ 3 π 2Out in Nature today: A new immune signaling molecule, His-ADPR, is produced by defensive TIR domain proteins in bacteria to protect from phage
Joint work with the TamulaitienΔ and Kranzusch labs
www.nature.com/articles/s41...
Congrats Carmel Avraham, Dziugas Sabonis, Renee Chang and co-authors!
A beautiful discovery by Joel Tan and Philip Kranzusch, out today in Nature:
A DNA-gated molecular guard controls bacterial Hailong anti-phage defence
Congrats Joel and Philip! Was a pleasure to contribute to this discovery together with Sarah Melamed
www.nature.com/articles/s41...
PhD position available - plant-microbe-pollinator interactions in Kowhai flowers! With myself & Prof Jacqueline Beggs, based at Manaaki Whenua, Lincoln. Details below, or DM me! @microbiologysociety.org @evoldir.bsky.social @aucklanduni.bsky.social @microbiologynz.bsky.social
30.04.2025 23:03 β π 7 π 8 π¬ 1 π 1Super excited that this manuscript investigating verapamil potentiation of bedaquiline in M. tuberculosis is now in PNAS!! Great collaborative effort with Lalita Ramakrishnan and her team at the MRC-LMB!!
www.pnas.org/doi/10.1073/...
@pnas.org
@universityofotago.bsky.social
New postdoc position in our lab (2 y+): evolutionary genomics of integrons and MGEs with focus on vibrio-phage interactions. Great environment @pasteur.fr for science, career building. Super collaborators @celineloot.bsky.social @amazeld.bsky.social @fredoleroux.bsky.social 3 weeks to apply!
16.04.2025 07:14 β π 99 π 126 π¬ 2 π 1Amazing committee who helped organise everything including @bridgetwatson.bsky.social @dsashital.bsky.social and @knottrna.bsky.social
12.04.2025 21:42 β π 2 π 0 π¬ 0 π 0Was my pleasure to chair the #crispr2025 meeting earlier this year in my hometown in NZ @crisprmeeting.bsky.social
11.04.2025 21:11 β π 14 π 3 π¬ 1 π 0