@joeeweaver.bsky.social
Assistant Professor in Theoretical Biological (Microbiome) Modelling with the SMART Soils Lab at Durham University https://joeweaver.github.io/
Conveying research goals clearly is important; there are common writing 'moves', exemplified here by Girlfriend (Lavigne, 2007).
I don't like your girlfriend: clearly state the problem
I think you need a new one: propose solution
I could be your girlfriend: describe your specific contribution
@rorylcooper.bsky.social gave a very nice talk (with gorgeous art) on crocodilian head scale patterns. Fav finding was a potential simple explaination mechanisms driving scale diversity between species.
03.12.2025 15:05 β π 2 π 1 π¬ 0 π 0One sad consequence of mobile and cordless phones: much harder to explain DNA supercoiling these days.
03.12.2025 14:17 β π 0 π 0 π¬ 0 π 0Holy cow, a completely 3D printed microscope, including lenses! (and that nearly a β oh, by the wayβ part of @gailmcconnell.bsky.socialβs opening talk on all sorts of advances in microscopy)
onlinelibrary.wiley.com/doi/10.1111/...
Settling into Durham University and attending the Biophysical Sciences Institute Winter ECR symposium. Had a peek at the posters, there is some amazing work going on at field intersections.
03.12.2025 10:04 β π 2 π 0 π¬ 1 π 0An ORCID battle I choose to fight. ORC-ID, not "Orchid"
02.12.2025 14:19 β π 0 π 0 π¬ 1 π 0Reading some old notes from a project report, "tools need X implemented to fix this problem. Probably about a half a day of coding".
Oh the lies we tell ourselves.
It's not *the* key to success, but on bit on that key is learning to consistently say to yourself "OK, I'll just work on <thing I've been avoiding but which should be my priority> for 5 minutes before I get tea."
2 hours later...
What if I told you you're allowed to place your figures inline in your preprints?
25.11.2025 17:04 β π 1 π 0 π¬ 0 π 0Question for the meta-analysis and systemic lit review colleagues out there. How do you handle bodies of work coming from problematic publishers - straight up exclusion, evidence weighting?
21.11.2025 14:55 β π 1 π 1 π¬ 0 π 0The 'oh my God Karen' meme from Mean Girls, except with the text 'Oh my God ScienceDirect. You can't just ask someone if they're a robot' underneath a screen capture of a science direct 'are you a robot?' captcha
A productive use of my time:
17.09.2025 17:36 β π 3 π 0 π¬ 0 π 0My test cases pass. Time for a coffee.
My test cases don't pass. Time for a coffee.
May the typographers who make fonts with I and 1 indistinguishable and the people who select those fonts as appropriate for a journal have an unpleasant night.
Those who make Ο and p too similar, consider yourself on notice.
I get to do the "I'm pleased to announce" thing!
Durham University has offered me the the position of Assistant Professor in Theoretical Biological (Microbiome) Modelling with the SMART soils lab to help create healthier soils across many environments and spanning multiple disciplines!
This is an indication of learning and progressing. You're doing great!
28.07.2025 12:53 β π 0 π 0 π¬ 1 π 0Even if your code is "messy". Even if it doesn't run fully. Making it easily available helps understanding the nitty gritty details that don't even get put into SI.
24.07.2025 20:51 β π 2 π 0 π¬ 0 π 0Gettin' REAL tired of bubble charts using diameter to indicate p-value when the chart ends up being panel Q of a 3x3 inch figure.
21.07.2025 10:39 β π 2 π 0 π¬ 0 π 0In my current project, I'm tracking my lower and upper task estimates and qualitative 'uncertainty'. I've been tackling the uncertain tasks as soon as possible and updating the upper/lower bounds. It's very fun watching the overall project upper/lower ETA converge.
Did I just become a Bayesian?
Me when one of 'my' proteins shows up in Thobela's keynote and #MEWE11:
05.06.2025 14:02 β π 2 π 1 π¬ 0 π 0Kind of blown away that *98%* of U.S. deaths from waterborne illness are specifically from biofilm associated pathogens. #MEWE11
02.06.2025 22:06 β π 1 π 0 π¬ 0 π 0Every time I fly west. "Gosh is this what being a morning person is like? I hate* morning people."
* Am deeply envious of.
#MEWE11
Decades of flying and probably dozens of times through ATL. I think this may be the first time I've ever seen the outside of the airport. #MEWE11
02.06.2025 00:55 β π 1 π 0 π¬ 0 π 0The reality is setting in, getting bags packed for #MEWE11
31.05.2025 14:38 β π 2 π 0 π¬ 0 π 0I saw a version of this talk at the Microbiology Society earlier this year. It was fascinating stuff!
28.05.2025 14:29 β π 3 π 0 π¬ 0 π 0Just me rewriting to remove em dashes in my proposal to avoid the latest generative AI witch hunt.
Keeping my 'moreovers' though.
Lots of writers I admire have advice which boils down to 'be consistent, don't wait until the mood hits you'.
I have had great success using the 'task inertia' of my personality. Not in the mood to write? OK, just set a timer and make an honest effort for 15 mins. An hour later...still writing.
We'll also go over nuts and bolts stuff, like how to get in contact with our colleagues in middle and high schools (hint: talk to them early!), how to bridge the languages secondary and higher education, how to navigate ethics approval, and how to disseminate the lesson plans widely.
08.05.2025 09:48 β π 1 π 2 π¬ 0 π 0