Benchmarking Genomic Variant Calling Tools in Inbred Mouse Strains: Recommendations and Considerations https://www.biorxiv.org/content/10.1101/2025.05.28.656711v1
31.05.2025 19:47 β π 2 π 1 π¬ 0 π 0@alexisgarretson.bsky.social
Genetics PhD student at The Jackson Lab and Tufts University 𧬠genetic diversity & reproductive medicine through the lens of evolution, bioinformatics, and data science 𧬠π | π | π³ | https://alexis-catherine.github.io/
Benchmarking Genomic Variant Calling Tools in Inbred Mouse Strains: Recommendations and Considerations https://www.biorxiv.org/content/10.1101/2025.05.28.656711v1
31.05.2025 19:47 β π 2 π 1 π¬ 0 π 0Benchmarking Genomic Variant Calling Tools in Inbred Mouse Strains: Recommendations and Considerations https://www.biorxiv.org/content/10.1101/2025.05.28.656711v1
31.05.2025 19:47 β π 0 π 2 π¬ 0 π 0No! That's part of why I noticed!
05.04.2025 18:19 β π 2 π 0 π¬ 0 π 0Olivia Dunham on Fringe regularly does too I've been noticing on rewatch!
04.04.2025 03:55 β π 2 π 0 π¬ 1 π 0I just registered! Can't wait
04.03.2025 16:15 β π 2 π 0 π¬ 0 π 0Excited to be joining the 2025 @elife.bsky.social Community Ambassadors! It's amazing to see all the diversity in fields, geography, and background on today's welcome call, and I'm looking forward to the things we learn and explore together.
elifesciences.org/inside-elife...
No compromise on trans rights, ever.
03.03.2025 15:32 β π 260 π 28 π¬ 4 π 3The Trump Administration has abruptly pulled $4.5 million in Maine Sea Grant funds (via NOAA), which were used to protect Maineβs working waterfront and ocean ecosystems.
www.pressherald.com/2025/03/01/m...
Thank you for the work you and your team have done. This is unthinkable, and horrifying. Are there ways that your work needs support besides calling representatives/political actions?
02.03.2025 04:29 β π 1 π 0 π¬ 0 π 0Our team just had an NIH grant terminated. The reason?
βTransgender issues: Research programs based on gender identity are often unscientific,
have little identifiable return on investment, and do nothing to enhance the health of many
Americansβ¦.β
I wrote a letter to the editor about the risks of cutting federal climate-related science funding. I've found myself writing quite a few over the last few weeks, but this is the first one that's been published. If I can do it, so can you!
www.bangordailynews.com/2025/02/16/o...
Our 2024 Raskin Scholar is Brandon Whitehead from @manaakiwhenua.bsky.social @ufl.edu. He actually met and worked with Bob Raskin!
β‘οΈ Read more about Brandon's work and Bob's impact on #semantics: www.esipfed.org/meet-2024-ra...
βThe connections between Earth science and genomics lie in their shared goal of understanding and unraveling complex systems," says 2023 Raskin Scholar @alexisgarretson.bsky.social.
β‘οΈ Read more about her work in the @jacksonlab.bsky.social: www.esipfed.org/raskin-schol...
All NIH study sections canceled indefinitely. This will halt science and devastate research budgets in universities.
22.01.2025 20:46 β π 12316 π 5007 π¬ 590 π 1174SHARE WIDELY.
KNOW YOUR RIGHTS.
With mass deportations starting today across the country, it is vitally important - for both citizens and non-citizens - to know your rights.
You have the right to remain silent. Assert it. You have the right to a lawyer. Ask for one.
(1/3)
This is really good. A lot of you will be looking for something tangible you can do to protect those who are targeted by state kidnappers. I really like the idea of neighborhood ICE watches.
23.01.2025 03:28 β π 641 π 244 π¬ 19 π 16A clip art magnifying glass surrounded by colorful science-related icons, and in the center of the magnifying glass is the word "Meta analysis"
Join Reproducibility for Everyone @repro4everyone.bsky.social with @mikemalekahmadi for a session on How to Design a Meta-analysis
β¨ Open to everyone!
π
Date: Thursday, March 27th, 2025
π Time: 11 AM ET / 4 PM CET
π Register now: www.repro4everyone.org/blog/r4e-pre...
It's a new year and R4E has another educational webinar planned!
This time we are going to talk about how to carry out a meta-analysis with @mikemalekahmadi
Thursday March 27th, 2025
11 AM ET/ 4PM CET
All are welcome!
Register here
A new paper has been published in EHP Publishing: "Examining Potential PFAS Contamination of Private Wells from a High School in Rural Maine" from MDIBL's Alexis Garretson, Ashley Taylor, @joelinbh.bsky.social, @richardhilliard.bsky.social & Jane Disney
doi.org/10.1289/EHP1...
π§ͺπ€ #ResearchPublishing
Alexa Michaels explains a research poster to fellow TAGC conference attendees.
Hilda Frempong stands smiling next to a research poster at the TAGC conference.
Alexis Garretson explains a research poster to fellow TAGC conference attendees.
The Teaching the Genome Generationβ’ poster at the TAGC conference.
Congrats to the @jacksonlab.bsky.social's predoctoral and postdoctoral associates who presented at #TAGC24!
Members of our Teaching the Genome Generationβ’ team also presented a poster at the conference.
Thanks for hosting, Genetics Society of America! π
β@repro4everyone.bsky.social introduced me to practical, immediately applicable tools and strategies that have improved the transparency and reproducibility of my research. β #R4EtaughtMe
Consider @repro4everyone.bsky.social
for #GivingTuesday 2024!
Donate here: opencollective.com/reproducibil...