Non-Enzymatic Structural Modifications Reshape Peptide Presentation and Antigen Recognition
https://www.biorxiv.org/content/10.1101/2025.11.06.687013v1
08.11.2025 05:38 — 👍 0 🔁 0 💬 0 📌 0
Immunopeptidomics can inform the design of mRNA vaccines for the delivery of Mycobacterium tuberculosis MHC class II antigens https://pubmed.ncbi.nlm.nih.gov/41191777/
06.11.2025 05:39 — 👍 0 🔁 0 💬 0 📌 0
Investigating the conformational landscape of human histidine-rich glycoprotein using amide HDX-MS https://pubmed.ncbi.nlm.nih.gov/41190777/
05.11.2025 17:38 — 👍 0 🔁 0 💬 0 📌 0
Epitope mapping of diagnostic antibodies targeting SARS-CoV-2 nucleocapsid protein using hydrogen-deuterium exchange mass spectrometry https://pubmed.ncbi.nlm.nih.gov/41126529/
05.11.2025 05:40 — 👍 1 🔁 0 💬 0 📌 0
In vitro Characterization of Peptidomimetic Proteolysis Targeting Chimera (PROTAC) as a Degrader of 3-Chymotrypsin-Like Protease (Mpro/3CLpro) against SARS-CoV-2
https://www.biorxiv.org/content/10.1101/2025.10.30.685646v1
03.11.2025 17:37 — 👍 0 🔁 0 💬 0 📌 0
Data-Independent Immunopeptidomics Discovery of Low-Abundant Bacterial Epitopes https://pubmed.ncbi.nlm.nih.gov/41166551/
31.10.2025 05:39 — 👍 1 🔁 0 💬 0 📌 0
A Unified Protein Embedding Model with Local and Global Structural Sensitivity
https://www.biorxiv.org/content/10.1101/2025.10.27.684815v1
28.10.2025 05:41 — 👍 0 🔁 0 💬 0 📌 0
Comprehensive Internal Standards for Hydrogen-Deuterium Exchange Mass Spectrometry https://pubmed.ncbi.nlm.nih.gov/41140027/
27.10.2025 17:37 — 👍 0 🔁 0 💬 0 📌 0
PeptiLine: an interactive platform for customizable functional peptidomic analysis
https://www.biorxiv.org/content/10.1101/2025.10.23.684139v1
26.10.2025 17:35 — 👍 1 🔁 0 💬 0 📌 0
Pan-cancer analysis reveals that tumor microbiomes generate specific epitopes through transcriptional reprogramming
https://www.biorxiv.org/content/10.1101/2025.10.22.683275v1
25.10.2025 05:37 — 👍 0 🔁 0 💬 0 📌 0
ERAP1 Allotypes 2 and 10 Differentially Regulate the Immunopeptidome of Melanocytes https://pubmed.ncbi.nlm.nih.gov/41130749/
24.10.2025 17:38 — 👍 2 🔁 1 💬 0 📌 0
Mapping the structural dynamics of red- and blue-emitting beetle luciferases revealed by HDX-MS https://pubmed.ncbi.nlm.nih.gov/41130797/
24.10.2025 05:38 — 👍 0 🔁 0 💬 0 📌 0
Epitope Mapping of Diagnostic Antibodies Targeting SARS-CoV-2 Nucleocapsid Protein Using Hydrogen-Deuterium Exchange Mass Spectrometry https://pubmed.ncbi.nlm.nih.gov/41126529/
23.10.2025 17:38 — 👍 0 🔁 0 💬 0 📌 0
Immunopeptidome analysis reveals SERPINB3 as an autoantigen driving eczematized psoriasis https://pubmed.ncbi.nlm.nih.gov/41124250/
23.10.2025 05:38 — 👍 1 🔁 0 💬 0 📌 0
Methionine Oxidation Footprinting in Intact Proteins (MOFIP) Using Top-Down Proteomics https://pubmed.ncbi.nlm.nih.gov/41116609/
22.10.2025 17:34 — 👍 0 🔁 0 💬 0 📌 0
Utilizing Protein Bioinformatics to Delve Deeper into Immunopeptidomic Datasets with AIMS: An Automated Immune Molecule Separator https://pubmed.ncbi.nlm.nih.gov/41085626/
21.10.2025 05:40 — 👍 0 🔁 0 💬 0 📌 0
A Novel Machine Learning Post-processing Filter for Mass Spectrometry-Based Proteogenomics Leveraging Retention Time Deviation and Peptide Physicochemical Properties https://pubmed.ncbi.nlm.nih.gov/41085625/
20.10.2025 17:40 — 👍 0 🔁 0 💬 0 📌 0
Characterization of Human Leukocyte Antigen (HLA) Proteins with Integrated Immunopeptidomics and Proteomics Approach https://pubmed.ncbi.nlm.nih.gov/41085623/
20.10.2025 05:39 — 👍 0 🔁 0 💬 0 📌 0
High-Coverage Immunopeptidomics Using timsTOF Mass Spectrometers with Thunder-DDA-PASEF Boosted by MS(2)Rescore https://pubmed.ncbi.nlm.nih.gov/41085619/
19.10.2025 17:35 — 👍 1 🔁 0 💬 0 📌 0
Targeted Analyses of MHC-I Peptides Using TOMAHAQ https://pubmed.ncbi.nlm.nih.gov/41085618/
19.10.2025 05:39 — 👍 0 🔁 0 💬 0 📌 0
Epitope Screening by Hydrogen-Deuterium Exchange Mass Spectrometry for Improved Immunotherapeutic Outcomes https://pubmed.ncbi.nlm.nih.gov/41085634/
16.10.2025 17:38 — 👍 0 🔁 0 💬 0 📌 0
Mapping Hydrogen Migration Thresholds for Site-Specific HDX-MS https://pubmed.ncbi.nlm.nih.gov/41067539/
10.10.2025 05:37 — 👍 0 🔁 0 💬 0 📌 0
Targeting Kinases to Reshape the Immunopeptidome landscape in Chronic Myeloid Leukemia
https://www.biorxiv.org/content/10.1101/2025.10.07.680859v1
09.10.2025 05:36 — 👍 0 🔁 0 💬 0 📌 0
Identification of Expressed Endogenous Retroviral Element Associated Long Terminal Repeats in Devil Facial Tumour Cells
https://www.biorxiv.org/content/10.1101/2025.10.06.679394v1
08.10.2025 17:37 — 👍 0 🔁 0 💬 0 📌 0
Recurrent immunogenic neoantigens and their cognate T-cell receptors in treatment-resistant metastatic prostate cancer https://pubmed.ncbi.nlm.nih.gov/41056506/
08.10.2025 05:37 — 👍 0 🔁 0 💬 0 📌 0
Assembly and substrate engagement mechanism of the bacterial proteasome activator Boa
https://www.biorxiv.org/content/10.1101/2025.10.01.679806v1
02.10.2025 05:36 — 👍 0 🔁 0 💬 0 📌 0
Immunopeptidomics informs discovery and delivery of Mycobacterium tuberculosis MHC-II antigens for vaccine design https://pubmed.ncbi.nlm.nih.gov/41031036/
01.10.2025 17:37 — 👍 2 🔁 0 💬 0 📌 0
Genetic landscape of DNMT3A R882H reveals mechanism of aberrant oligomerization
https://www.biorxiv.org/content/10.1101/2025.09.24.678339v1
28.09.2025 17:31 — 👍 0 🔁 0 💬 0 📌 0
Immunopeptidome Landscape During Brucella melitensis Infection in Mice https://pubmed.ncbi.nlm.nih.gov/41009442/
28.09.2025 05:36 — 👍 0 🔁 0 💬 0 📌 0
Framework for analyzing MAE-derived immunopeptidomes from cell lines with shared HLA haplotypes https://pubmed.ncbi.nlm.nih.gov/40996974/
27.09.2025 05:34 — 👍 1 🔁 0 💬 0 📌 0
