this is pretty much the plot of the movie clear and present danger
08.08.2025 14:01 β π 454 π 133 π¬ 24 π 11@typemat12.bsky.social
Microbial (meta)genomics researcher @sangerinstitute interested in genomic epidemiology and evolutionary dynamics of STIs/NTDs/AMR in complex samples. Views my own. https://www.sanger.ac.uk/person/beale-mathew/
this is pretty much the plot of the movie clear and present danger
08.08.2025 14:01 β π 454 π 133 π¬ 24 π 11Aieeeeeeeeee.
07.08.2025 15:14 β π 13 π 4 π¬ 0 π 0Itβs started #stihiv2025 π§ͺ
Fantastic keynote by Henry de Vries
His short history of #STI covers changing views of STIs, sexuality, AIDS, queer theory and sex positivity
But moves on to where we are now with illiberalism
And a shout out ahead of the closing keynote @drjeannem.bsky.social
Iβm here!
26.07.2025 20:30 β π 2 π 0 π¬ 0 π 0STI&HIV2025 World Congress starts in Montreal Sunday 27th July https://stihiv2025.org/
STI & HIV 2025 World Congress #stihiv2025 starts Montreal Sunday 27th July stihiv2025.org/program/ @stihiv2025.org
Absolutely delighted for this to be my first π§ͺ feed post
The world's biggest conference dedicated to research on sexually transmitted infections #chlamydia #gonorrhoea #syphilis
π§΅
Enjoying the beautiful weather in beautiful Montreal ahead of #stihiv2025
26.07.2025 19:09 β π 2 π 0 π¬ 0 π 0Nothing better than talking syphilis! Thanks @ukhsa.bsky.social @thelovetankcic.bsky.social @typemat12.bsky.social @nicolelieberman.bsky.social @manikkohli.bsky.social & others who came to kick off my NIHR Professorship. Looking forward to working with you & communities to improve UK Sexual Health
23.07.2025 11:04 β π 16 π 2 π¬ 1 π 0Terrific news that @robinmay9.bsky.social of @imibirmingham.bsky.social has been appointed CSO of @ukhsa.bsky.social today! www.gov.uk/government/n... A fantastic choice!
21.07.2025 11:30 β π 18 π 3 π¬ 0 π 0Our paper βGlobal dissemination ofβ―npmA mediated panβaminoglycoside resistance via a mobile element in Gramβpositive bacteriaβ is now in @natcomms.nature.com. Part of my freshly defended PhD, so doubly happy! ππ
π§΅ (1/14)
www.doi.org/10.1038/s414...
Using the antibiotic doxycycline used as post-exposure & pre-exposure prophylaxis (doxyPEP/PrEP) can prevent #STI
Even though it's currently not recommended in the Netherlands, 15% of 1,633 survey participants stated recent informal use without prescription
#SexualHealth #IDSky #AMR #PublicHealth
Incredible opportunity to work with an excellent team AND undertake a funded PhD on syphilis and STI control in the UK π
29.06.2025 14:55 β π 0 π 1 π¬ 0 π 0Suggest revising the freetext questions - βvcfβ or βVcfβ = wrong, VCF = right. I only got freetext ones wrong.
Also why no love for pacbio?
Lately McSweeneys is a really consistent source of socio-political bangers.
www.mcsweeneys.net/articles/i-s...
π¨ We're recruiting! The Journal of Medical Microbiology is seeking two Editors for our Molecular and Microbial Epidemiology section. Help shape the future of microbiology research.
π
Apply by 20 June 2025
π microb.io/News
Highlighting the importance of access not only to the new gonorrhoea vaccine, but to sexual health services more broadly π
27.05.2025 12:55 β π 8 π 1 π¬ 0 π 0A tour de force in investigating and building capacity for a neglected tropical disease through genomics by @chewapreecha.bsky.social
23.05.2025 10:20 β π 3 π 0 π¬ 1 π 0Great on fungal pathogen threats from @chownbioinf.bsky.social (with slides from @drjorhodes.com) #ABPHM25
23.05.2025 08:54 β π 7 π 0 π¬ 0 π 1An exciting new Doctoral Training Programme in Microbial Genomics for Health Protection, in collaboration with the UK Health Security Agency @ukhsa.bsky.social, has just launched, funded by @nihr.bsky.social there are 9 PhD projects available (UK students only) www.birmingham.ac.uk/research/cen...
23.05.2025 08:34 β π 11 π 19 π¬ 0 π 1Ebenezer Foster-Nyarko presenting his introductory slide on cholera genomics at the ABPHM 2025 conference
Super talk from @efosternyarko.bsky.social @lshtmamrcentre.bsky.social on nanopore based sequencing of cholera across Africa, with PulseNet Africa partners
#ABPHM25
www.biorxiv.org/content/10.1...
π§΅5 Top Free Alternatives to BioRender for Scientific Illustrations!
These five websites offer free scientific illustrations for biologists. Great for presentations, research papers and other research communication needs.
Save and share the post!
Happy to share our first preprint looking at the nasal microbiome in ~1000 healthy adults from the CARRIAGE study of 20,000 healthy blood donors to understand nasal colonisation by Staphylococcus aureus. Ten years in the making! doi.org/10.21203/rs....
07.05.2025 11:35 β π 7 π 2 π¬ 0 π 1Happy to share the first preprint from my lab. Great work by Lewis Fisher and collaboration with Jukka Corander
www.biorxiv.org/content/10.1...
Agreed - my first thought when I saw this was "why not just use ENA anyway?". I'm open to being convinced there is a reason to prefer SRA (even with this).
30.04.2025 15:00 β π 1 π 0 π¬ 1 π 0It's Bezos's space rocket (which in no way looks like anything else)
24.04.2025 15:45 β π 1 π 0 π¬ 0 π 0Yesterday was my one-year work anniversary with the @sangerinstitute.bsky.social! One year has flown by.
The variety of topics I've gotten to research and write about (π§΅), the people I've met and interviewed, and the dino-mini golf that's been played have all made this a memorable year.
High intra-laboratory reproducibility of nanopore sequencing in bacterial species underscores advances in its accuracy. Find out more in #MGen: doi.org/10.1099/mgen...
11.04.2025 11:00 β π 3 π 5 π¬ 0 π 0So glad this is finally out. The method has been instrumental in allowing us to compress the AllTheBacteria data - ~2 million bacterial genomes shrink from 3Terabytes (gzipped) to 100Gb using phylogenetic compression. Great work by @brinda.eu
09.04.2025 22:27 β π 126 π 51 π¬ 4 π 11 week until deadline for this postdoc position. Really key position in my lab working on amazing datasets
09.04.2025 05:07 β π 4 π 9 π¬ 0 π 0If lost there's no going back: "...the lab holds the worldβs largest repository of gonorrhea isolates β over 50,000, dating back to 1988 when the CDC began to collect them."
www.statnews.com/2025/04/05/c...