GUNC v1.0.6 has just been released! This version is a minor release with some small bugfixes and a fix for compatibility with pandas v2. Changelog here: gunc.embl.de/changelog.html The next release is already underway - with more substantial feature additions.
24.11.2023 14:01 — 👍 9 🔁 3 💬 0 📌 0
Scientist.
Pangenomes, symbiosis, evolution, metagenomics.
Postdoc University of Amsterdam; previously NIOZ 🇳🇱; EMBL🇩🇪; North Dakota State University🇺🇲, Fulbright Program; Taras Shevchenko National University of Kyiv, Ukraine🇺🇦
🎓 previously @borklab.bsky.social @EMBL.org & @saezlab.bsky.social @uniHeidelberg.bsky.social
📍Heidelberg
🦠Human microbiome | Host-microbiome interactions | Multiomics integration
Evolutionary cell biology @EMBL
evonuclab.org
EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/
Project Associate Professor at the Life Science Data Research Center, @UTokyo
Metagenomics, gut microbiome, computational biology
Helping scientists find the epitope specificity of their T-cell receptors at @immunewatch.bsky.social (www.immunewatch.com)
Scientist on an entrepreneurial journey
PhD in bioinformatics and microbiology
Ex-Bork (EMBL) and Lebeer lab
Systems Microbiology @EMBL, combining high-throughput approaches & mechanism in bacteria, antibiotics, microbiome, infection, species diversity, cell envelope
https://www.embl.org/groups/typas/
PostDoc Fellow @BorkLab @EMBL
Computational biology lab focusing on microbiomes in the human gut and the environment
Homepage: https://www.bork.embl.de/
Mastodon: https://mstdn.science/@BorkLab
programming and exclamation marks
blog: jvns.ca
zines: wizardzines.com
Chair, Computational BIology and Medicine Program, Princess Margaret Cancer Centre, University Health Network.
Associate Professor, Medical Biophysics, University of Toronto.
Disclosures: https://github.com/michaelmhoffman/disclosure/
The Laboratory of Computational Metagenomics led by Nicola Segata
**We are hiring, get in touch if interested!**
http://segatalab.cibio.unitn.it/
Moderator @svetlanaup.bsky.social
Computational microbiologist. Senior scientist at @cemess.bsky.social, @univie.ac.at.
Microbial ecology, mostly of nitrogen cycle microbes, and data driven physiology.
Maintainer of the GlobDB genome database https://globdb.org
physician-scientist, author, editor
https://www.scripps.edu/faculty/topol/
Ground Truths https://erictopol.substack.com
SUPER AGERS https://www.simonandschuster.com/books/Super-Agers/Eric-Topol/9781668067666
Postdoc in the Blekhman lab at UChicago | Infant and breast milk microbiome | antimicrobial resistance | animal microbiome | microbial ecology.
https://pamelaferretti.net/
Postdoc @BorkLab @embl. PhD @UniHohenheim. Microbiome, FMT, Strain-level Metagenomics, Nutrition, ML
Computational biologist. Research staff scientist and research coordinator in the @borklab.bsky.social at @embl.org Heidelberg.
engineer twitch . http://twitch.tv/melkey . http://youtube.com/@MelkeyDev . http://astrostation.me . http://resuai.io . http://discord.gg/melkeydevhouse
Bioinformatics tools developer at Australia’s Centre for Population Genomics. Will edit GA4GH specifications for food. New Zealander fairly recently returned after a decade in the U.K.
