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Arup Ghosh

@arup.dev.bsky.social

Postdoctoral fellow, Norwegian Institute of Public Health. Working in the intersection of 🧬genomics and ☣️ toxicology.

48 Followers  |  270 Following  |  3 Posts  |  Joined: 17.11.2024  |  1.6978

Latest posts by arup.dev on Bluesky

How do you deal with the agent writing unnecessarily long code to do something very simple?

21.10.2025 13:06 — 👍 0    🔁 0    💬 1    📌 0
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🎉 The Nordic CompBio Conference is coming soon to Tallinn, Estonia 🇪🇪
📅 Thursday-Friday 23-24th of October (10:30-17:15 EEST)
📢 Abstract submissions and registration are open
🔗 nordic-compbio.org/ncb-week

#NordicCompBio #ComputationalBiology #Bioinformatics #Nordics

06.10.2025 14:47 — 👍 4    🔁 3    💬 0    📌 0
kana Single cell analysis in the browser

Great list! You might also want to check out Kana, a tool that coolly uses WebAssembly (WASM).

www.kanaverse.org/kana/

03.05.2025 12:30 — 👍 1    🔁 0    💬 1    📌 0
A Single-Dose Breakthrough: PfSPZ-LARC Vaccines Offer Transformative Protection Against Malaria – Sanaria

#medsky#pedsky#idsky#immunosky 🧪
In the midst of all of the scary headlines recently, I thought I could take a moment to share a bit of good news: for the first time in history, a malaria vaccine with >90% efficacy seems to be within reach!

Here’s why that’s a really big deal for EVERYONE 🧵

13.02.2025 13:23 — 👍 15499    🔁 2823    💬 430    📌 209
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ggalign: Bridging the Grammar of Graphics and Biological Multilayered Complexity 🧬🖥️🧪
Paper: https://www.biorxiv.org/content/10.1101/2025.02.06.636847v1
#Rstats Code: https://github.com/Yunuuuu/ggalign
Docs: https://yunuuuu.github.io/ggalign/
Book (Quarto): https://yunuuuu.github.io/ggalign-book/

08.02.2025 12:14 — 👍 61    🔁 30    💬 0    📌 0
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Notebook intelligence blog.jupyter.org/introducing-...

04.02.2025 17:06 — 👍 9    🔁 2    💬 0    📌 0
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PhD Research Fellow in Bioinformatics and Gene Regulation (274506) | University of Oslo Job title: PhD Research Fellow in Bioinformatics and Gene Regulation (274506), Employer: University of Oslo, Deadline: Friday, February 28, 2025

🚨 PhD in Bioinformatics & Gene Regulation 🚨

Join the Bioinformatics in Life Science (BiLS) initiative through a multidisciplinary project to unravel gene regulation from DNA to proteins, co-supervised by E. Valen @jonnings.bsky.social and me!

www.jobbnorge.no/en/available...

04.02.2025 19:45 — 👍 7    🔁 6    💬 0    📌 0
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Possibly useful little #Rstats trick:

edit(names(iris))

will create a popup with the R code for the character vector containing the column names of your data frame that you can copy and paste, e.g.

c("Sepal.Length", "Sepal.Width", "Petal.Length", "Petal.Width", "Species")

04.01.2025 19:11 — 👍 110    🔁 21    💬 6    📌 0
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The team getting everything ready for the Workshop on Genomics 2025 in Český Krumlov! Looking forward meeting all the participants on Sunday! 🤩 #evomics2025 #genomics #bioinformatics

04.01.2025 09:07 — 👍 35    🔁 12    💬 0    📌 2

Hei Oslo folks.
Registration is now open for the Oslo Bioinformatics Workshop Week 2024, which will happen on December 9th - 13th, 2024. Please find the schedule and registration at www.mn.uio.no/sbi/english/.... The event is supported by UiO, UiO:LifeScience, and NCMM.

19.11.2024 09:26 — 👍 9    🔁 2    💬 1    📌 0

Thanks for the great initiative.

17.11.2024 22:38 — 👍 1    🔁 0    💬 0    📌 0

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