SIB Text Mining group @sib-text-mining

SIB Text Mining group

@sib-text-mining.bsky.social

https://www.sib.swiss/patrick-ruch-group https://bitem.hesge.ch/ #Bioinformatics #TrustworthyAI #Biodiversity #DataScience #Textmining

6 Followers | 17 Following | 5 Posts | Joined: 17.11.2025 | 1.2275

Latest posts by sib-text-mining.bsky.social on Bluesky

jknafou/TransBERT-bio-fr · Hugging Face We’re on a journey to advance and democratize artificial intelligence through open source and open science.

Nice momentum for TransBERT : 4 → 54 downloads in a month !
It's encouraging to see that machine-translated corpora can support high-quality domain-specific models for low-resource languages. Looking forward to the next steps. 🗺️
huggingface.co/jknafou/TransBERT-bio-fr

03.12.2025 09:39 — 👍 0 🔁 0 💬 0 📌 0

📣 The call for tutorials & workshops at #ECCB2026 is now open! Share your tools, methods or expertise with the community.
🗓️ Deadline: 5 January 2026
👉 Submit: tinyurl.com/tw-eccb26

💡 ECCB will take place on 31 Aug–4 Sept in Geneva, gathering 1,000+ scientists from academia, industry, & healthcare.

03.11.2025 08:09 — 👍 19 🔁 15 💬 0 📌 4

Revisiting on last month’s #SciDataCon2025 session co-chaired by Julien Gobeill and Wolmar Nyberg Åkerström on transforming supplementary data into FAIR datasets 🔍🔓🔗♻️
Such an important challenge for the community.
#FAIRdata #OpenScience

20.11.2025 06:11 — 👍 2 🔁 0 💬 0 📌 0

TransBERT: A Framework for Synthetic Translation in Domain-Specific Language Modeling Julien Knafou, Luc Mottin, Anaïs Mottaz, Alexandre Flament, Patrick Ruch. Findings of the Association for Computational Linguistics: EMNLP 2025. 2025.

Two weeks ago, Julien Knafou presented his work at #EMNLP2025 in Suzhou.
TransBERT is a framework for pre-training LM using synthetically translated text, and TransCorpus is our toolkit for creating large-scale translated corpora.
Try it here
huggingface.co/jknafou/Tran...
github.com/jknafou/Tran...

19.11.2025 10:41 — 👍 0 🔁 0 💬 0 📌 1

ELIXIR Platforms co-located event - autumn 2025 | ELIXIR

The SIB TM group will attend the ELIXIR Data Platform at the Co-Located Event in Marseille (17–20 Nov 2025)! We look forward to discussions on curated data, FAIR practices, AI-ready datasets, and cross-platform collaboration in biomedical and biodiversity research.
elixir-europe.org/events/elixi...

17.11.2025 17:54 — 👍 0 🔁 0 💬 0 📌 0

Hello world! The SIB Text Mining Group just landed on Bluesky!
We process clinical, scientific and other types of documents to help biomedical / biodiversity experts make sense of complex information.
Expect smart search tools, data science, AI… and plenty of text wizardry 🧙‍♂️✨📝 Stay tuned!

17.11.2025 17:33 — 👍 3 🔁 0 💬 0 📌 0

@sib-text-mining is following 17 prominent accounts

Cellosaurus
@cellosaurus

Account of the Cellosaurus (www.cellosaurus.org) knowledge resource, the encyclopedia of cell lines Watch our introductory video on: https://www.youtube.com/watch?v=xKA2AleIe0g

SBFI SEFRI SERI
@sbfi.admin.ch

Staatssekretariat für Bildung, Forschung und Innovation Secrétariat d’État à la formation, à la recherche et à l’innovation State Secretariat for Education, Research and Innovation https://www.sbfi.admin.ch

Schweizerischer Nationalfonds - Fonds National Suisse
@snf-fns.ch

News zum SNF, zu SNF-geförderter Forschung sowie zu nationaler & internationaler Forschungspolitik. Actualités du FNS, des recherches qu’il finance et de la politique de recherche sur le plan national et international. English: @snsf.ch

Horizon Europe
@horizoneu

Bsky archive of Official Horizon EU profile for the EU's Research & Innovation Programme. europa.eu/!Xf47NRP check out also @creativeeurope.bsky.social and @euerasmusplus.bsky.social atm powered by @gogash.bsky.social

Swiss National Science Foundation (SNSF)
@snsf.ch

The Swiss National Science Foundation funds excellent research at universities and other institutions – from chemistry to medicine to sociology. We invest in researchers and their ideas 🔬🌱📚 — www.snf.ch/en Deutsch & Français: @snf-fns.ch

EOSC Data Commons
@eosc-data-commons

Services for inter- and cross-disciplinary data discovery, access, sharing and reuse in the EOSC Federation. Horizon Europe project funded by the European Union. #EOSC #HorizonEU

Gene Ontology
@geneontology

The Gene Ontology (GO, geneontology.org) knowledgebase is the world’s largest source of information on gene function. Our mission is to develop a comprehensive, computational model of biological systems, ranging from the molecular to organism level.

CERN
@cern

CERN is the European laboratory for particle physics, home to the Large Hadron Collider. linktr.ee/CERN_official

Biodiversity Genomics Europe (BGE)
@biogeneurope

A new pan-European consortium – Biodiversity Genomics Europe – is leading the comprehensive application of genomic science to biodiversity research to drive fundamental advances in conservation science and policy. https://linktr.ee/biogeneurope

EU Science, Research & Innovation
@scienceinnovation.ec.europa.eu

The EU channel for scientists & researchers: opportunities to fund your ideas, updates from EU-funded science, and scientific resources you can use in your work.

EMBL-EBI
@ebi.embl.org

EMBL's European Bioinformatics Institute (EMBL-EBI) provides open biological data resources and tools, and performs basic research in computational biology. https://www.ebi.ac.uk/

Alexandre Flament
@dalf73

Luc Mottin
@luc-mottin

GBIF
@gbif.org

Global Biodiversity Information Facility Want to be the first to learn about new datasets and use of data in GBIF? Check out @gbifmorpho.bsky.social 🦋

Plazi
@plazi-species

http://plazi.org/ is a Swiss NFP-Organisation. We support persistent and openly accessible digital taxonomic data. #FAIRdata | supported by Arcadia Fund Here we present newly discovered species.

ELIXIR Europe
@elixir-europe.org

A life sciences research infrastructure, bringing together #bioinformatics resources across Europe to store, analyse, share and reuse data.

SIB Swiss Institute of Bioinformatics
@sib.swiss

The SIB Swiss Institute of Bioinformatics is an internationally recognized non-profit organization dedicated to biological and biomedical #DataScience. We provide essential resources, expertise and services and represent Swiss bioinformatics.