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โšก๏ธ๐Ÿ”ฉFelsenstein's Monster๐Ÿ”ฉโšก๏ธ

@josephwb.bsky.social

Comp. evol. biol., fake ornithologist, LFHCfs, Luddite, CSH I get down methodically Without regard to my soul tinyurl.com/G00gleSch0lar HHGG bot: @whalepetunias.bsky.social pfp: Chickens exposed to natural beard hair on a mannequin hdr: socks & sandals

2,509 Followers  |  452 Following  |  3,167 Posts  |  Joined: 25.08.2023  |  1.8101

Latest posts by josephwb.bsky.social on Bluesky

Global evolutionary relationships of Devonian proetide trilobites | Journal of Paleontology | Cambridge Core Global evolutionary relationships of Devonian proetide trilobites

Iโ€™m really happy to see Katโ€™s first dissertation chapter published! www.cambridge.org/core/journal...

18.10.2025 05:06 โ€” ๐Ÿ‘ 8    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Genome maintenance by telomerase is a fundamental process in nearly all eukaryotes. But where does it come from?

Today, we report the discovery of telomerase homologs in a family of antiviral reverse transcriptases, revealing an unexpected evolutionary origin in bacteria.

doi.org/10.1101/2025...

17.10.2025 12:47 โ€” ๐Ÿ‘ 68    ๐Ÿ” 30    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 3

Agreed.

I also find the axes orientations awkward. Normally you'd have a ++ north-east quadrant, but here it is north-west?

17.10.2025 15:25 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Color, size, shape: The drivers of floral variation in Hesperis matronalis (Dames Rocket) Evolutionary biologists have long been intrigued by the factors that sustain genetic and phenotypic variation within and among natural populations. Polymorphisms underlying components of floral displa...
17.10.2025 15:12 โ€” ๐Ÿ‘ 3    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Revised evolutionary relationships within Brachycera and the early origin of bicoid in flies Mulhair et al. uncover a functional bicoid in non-cyclorrhaphan flies, pushing the gene's origin back by โˆผ20 million years. Reassessing the Diptera phylogeny using the largest dataset to date permits ...

Latest work out today in @currentbiology.bsky.social

We find the fly development gene bicoid is much older than previously thought (~20 million yrs older!) ๐Ÿชฐ๐Ÿงฌ

To pinpoint its origins we tackled the Diptera phylogeny, providing some resolution (many open questions remain).

๐Ÿ”— tinyurl.com/2vyuevpy

17.10.2025 15:13 โ€” ๐Ÿ‘ 29    ๐Ÿ” 17    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1
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A mosaic of modular variation at a single gene underpins convergent plumage coloration The reshuffling of genomic variation from multiple origins is an important contributor to phenotypic diversification, yet insights into the evolutionary trajectories of this combinatorial process and ...

A TE insertion controls throat colour in wheatears. The gene involved (ASIP) is the same one that is epigenetically affected by an IAP insertion the famous Avy mice.

As if we needed more reasons to love TEs.

17.10.2025 11:43 โ€” ๐Ÿ‘ 9    ๐Ÿ” 9    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Loss of macroevolutionary species fitness explains the rise and fall of clades - Nature Ecology & Evolution The interplay between speciation and extinction rates shapes clade diversity dynamics. Using a novel phylogenetic model that includes living and fossil lineages, the authors estimate speciation and ex...

Check out this amazing paper by @ignacioq.bsky.social et al. on the rise and fall of clades using a new fossilized birth-death model and inegrating phylogenetic and fossil occurence data.
www.nature.com/articles/s41...

17.10.2025 10:33 โ€” ๐Ÿ‘ 16    ๐Ÿ” 11    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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A deep-time landscape of plant cis-regulatory sequence evolution Developmental gene function is conserved over deep time, but cis -regulatory sequence conservation is rarely found. Rapid sequence turnover, paleopolyploidy, structural variation, and limited phylogen...

From @kirkamundson.bsky.social this looks pretty amazing. www.biorxiv.org/content/10.1...

17.10.2025 09:38 โ€” ๐Ÿ‘ 12    ๐Ÿ” 12    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

On the one hand, you should _totally_ know. On the other, it is _so_ gd stupid and unsatisfying you should count yourself lucky :P

17.10.2025 03:51 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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GitHub - Raphire/Win11Debloat: A simple, lightweight PowerShell script to remove pre-installed apps, disable telemetry, as well as perform various other changes to customize, declutter and improve you... A simple, lightweight PowerShell script to remove pre-installed apps, disable telemetry, as well as perform various other changes to customize, declutter and improve your Windows experience. Win11D...

If you intend to keep using Windows, you can remove the "AI" garbage and telemetry with Windows 11 Debloat.

It also works on Windows 10, because Windows 10 ALSO has Copilot.

15.10.2025 21:26 โ€” ๐Ÿ‘ 1242    ๐Ÿ” 696    ๐Ÿ’ฌ 8    ๐Ÿ“Œ 17
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Distinct haplotypes and reversed dominance at a single-gene balanced polymorphism controlling heterodichogamy in two genera of wingnuts In the angiosperm mating system of heterodichogamy, two hermaphroditic morphs temporally alternate between male and female flowering phases, promotingโ€ฆ

Congratulations to @jeffgroh.bsky.social on the publication of his paper on an ancient balanced polymorphisms controlling heterodichogamy in two genera of wingnuts. The paper shows the putative turnover & reversal of dominance of a mating type polymorphism
www.sciencedirect.com/science/arti...

16.10.2025 15:42 โ€” ๐Ÿ‘ 63    ๐Ÿ” 32    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

We're excited to be recruiting an NIH funded postdoc to work in the Coop lab at UC Davis. We're specifically interested in candidates who are want to work at the intersection of human genetics, GWAS, and population genetics modeling. Please RT

15.10.2025 15:53 โ€” ๐Ÿ‘ 128    ๐Ÿ” 156    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 4
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A simple model reveals why complex evolutionary innovations follow predictable paths Determining the principles underlying the origin of novel characters has been a fundamental goal of evolutionary biology. Yet, key mechanisms remain poorly understood, hindered by the lack of a genera...

Have been a bit silent recently as I've been working on this new version of our preprint! In this study, we present a generalizable evo-devo model to explore principles of evolutionary innovations. A thread ๐Ÿงต ahead about this, and what's new... 1/11
www.biorxiv.org/content/10.1...

16.10.2025 15:03 โ€” ๐Ÿ‘ 13    ๐Ÿ” 9    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Boards of Canada "Olson" on a 1959 PDP-1 Computer
YouTube video by Joe Lynch Boards of Canada "Olson" on a 1959 PDP-1 Computer

This is rad

"Loading Music from Punched Paper Tape"
youtu.be/wubkrBd3-gg?...

16.10.2025 13:49 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Want to make publication-ready figures come straight from Python without having to do any manual editing? Are you fed up with axes labels being unreadable during your presentations? Follow this short tutorial including code examples! ๐Ÿ‘‡๐Ÿงต

16.10.2025 08:26 โ€” ๐Ÿ‘ 102    ๐Ÿ” 25    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 3
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Phylogenomic Discordance: Patterns, Processes, and Solutions Phylogenomics, the study of evolutionary relationships using genomic data, has revolutionized our understanding of the Tree of Life. As a field, phylogenomics h

If you're interested in understanding discordance in phylogenomic analyses, the @evojlinnsoc.bsky.social's special issue 'Phylogenomic Discordance: Patterns, Processes, and Solutions' is for you!

tinyurl.com/v2eces3s

I'll be sharing a few articles a week until we're through the issue! (1/n)๐Ÿงช

29.09.2025 16:00 โ€” ๐Ÿ‘ 10    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 2

Too niche, and not of your generation/cohort :)

Probably nit all that funny, either :(

16.10.2025 05:04 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

Someone asked me an easily lookupable fact about an anti-authoritarian hip hop metal band.

I told them to RTFRATMM.

16.10.2025 00:32 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0
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For #WoodDuckWednesday, a lovely couple preening. This also fits the alternative theme of #reflection for #BirdOfTheDay! #birds #photography #EastCoastKin

15.10.2025 16:02 โ€” ๐Ÿ‘ 167    ๐Ÿ” 23    ๐Ÿ’ฌ 9    ๐Ÿ“Œ 1

๐Ÿšจ๐Ÿชฒ COOL JOB ALERT ๐Ÿชฒ๐Ÿšจ
3-year position at the Western Australian Museum working on an awesome beetle phylogenetics project, starting at $105k dollarydoos per annum: search.jobs.wa.gov.au/page.php?pag...

15.10.2025 16:10 โ€” ๐Ÿ‘ 19    ๐Ÿ” 17    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0

I'm recruiting a postdoc for my group (based in beautiful Eugene, OR). Please get in touch if you're interested, esp if you'd like to chat at #ASHG25!

15.10.2025 12:52 โ€” ๐Ÿ‘ 32    ๐Ÿ” 37    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Out now in Biology Letters, my latest paper tackles an apparently simple question: how many characters are needed to reconstruct a phylogeny? TL;DR: in most cases between 100 and 500, more than a substantial portion of morphological datasets, but the story is more complex... doi.org/10.1098/rsbl...

15.10.2025 09:28 โ€” ๐Ÿ‘ 79    ๐Ÿ” 43    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
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Here's a T. Rex bored to death trying to bite their own tail. My partner asked me to animate it in stop motion, after she watched a video about the very important topic of "could T. Rex chew its own tail like a dog". The puppet is still a work in progress ๐Ÿฆ–

15.10.2025 01:35 โ€” ๐Ÿ‘ 4505    ๐Ÿ” 1332    ๐Ÿ’ฌ 71    ๐Ÿ“Œ 34
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Hey #Botany2026 we're actively looking for potential speakers at ALL experience levels for our proposed colloquium: Side-quest! โ€“ Level up your science!. If you have an interesting story, project, or idea to share that qualifies as a โ€œSide-questโ€ we want to know about it!

More info belowโฌ‡๏ธโฌ‡๏ธโฌ‡๏ธโฌ‡๏ธโฌ‡๏ธ

15.10.2025 02:10 โ€” ๐Ÿ‘ 9    ๐Ÿ” 10    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0
The cover of the Cleaning Biodiversity Data in R book. It has an illustration of an Pacific Cleaner Shrimp in the middle of a navy background. The shrimp has a bright red-orange shell, pale-yellow body and white whiskers.

The cover of the Cleaning Biodiversity Data in R book. It has an illustration of an Pacific Cleaner Shrimp in the middle of a navy background. The shrimp has a bright red-orange shell, pale-yellow body and white whiskers.

Still want to make cleaning biodiversity data shrimp-ler? ๐Ÿฆ

Good news: We just updated our Cleaning Biodiversity Data in R book, so you still can! We've updated data for 2025, added new content & fixed lots of silly typos ๐Ÿ˜€

Live the shrimp-le life:
cleaning-data-r.ala.org.au

#rstats #ecology ๐Ÿงช๐ŸŒ

15.10.2025 04:12 โ€” ๐Ÿ‘ 77    ๐Ÿ” 31    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 2
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Curator of Birds - Royal Ontario Museum - Career Page Apply to Curator of Birds at Royal Ontario Museum in Toronto, ON, Canada.

museum job alert ๐Ÿ‡จ๐Ÿ‡ฆ
royalontariomuseum.applytojob.com/apply/XBR2Yc...

15.10.2025 10:09 โ€” ๐Ÿ‘ 12    ๐Ÿ” 17    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Female fruit flies use social cues to make egg-clustering decisions - BMC Biology Background The ability to respond plastically to environmental variation is a key determinant of fitness. Females may use cues to strategically place their eggs, for example adjusting the number or lo...

Out now - female fruit flies cluster their eggs together depending on their social environment ๐Ÿชฐ๐Ÿงช Just wish they'd let us know why... led by @emilyrosech.bsky.social Emily Fowler, Lucy Friend and Tracey Chapman. link.springer.com/article/10.1...

15.10.2025 10:36 โ€” ๐Ÿ‘ 22    ๐Ÿ” 12    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
A mottled brown, grey, and white chicken-like bird is perched on a bare branch with its neck extended and crest up. This Ruffed Grouse is likely a female based on the lack of dark ruff feathers and the relatively short crest.

A mottled brown, grey, and white chicken-like bird is perched on a bare branch with its neck extended and crest up. This Ruffed Grouse is likely a female based on the lack of dark ruff feathers and the relatively short crest.

Although most birders see grouse as rather spherical (or "borb-like"_, they do have quite long necks. This typically occurs when perched in a tree and anxious about a predator and helps them look more "branch-like".
#birds #birding #Alberta #wildlife ๐Ÿชถ๐Ÿ‡จ๐Ÿ‡ฆ

14.10.2025 22:16 โ€” ๐Ÿ‘ 26    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

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