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tomjwebb

@tomjwebb.bsky.social

Professional marine biodiversity data scientist and academic @sheffielduni.bsky.social. Amateur dad, musician, natural historian, cricketer, kayaker, gardener, cook, haver of opinions.

3,227 Followers  |  289 Following  |  778 Posts  |  Joined: 26.07.2023  |  2.1542

Latest posts by tomjwebb.bsky.social on Bluesky

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YouTube video by Tom Webb refresh

In 2017 I made a note on my phone: 'write a song about friendship'. Barely 8 years later I took a music production course so I could deliver this only months after the second line went out of date. Refresh. youtu.be/ZPm3OWnxooM?...

14.10.2025 19:20 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Combining long-term ecological monitoring with AI-analysis and field experiments to model biodiversity responses to climate change at University of Southampton on FindAPhD.com PhD Project - Combining long-term ecological monitoring with AI-analysis and field experiments to model biodiversity responses to climate change at University of Southampton, listed on FindAPhD.com

If you β™₯️ barnacles, time-series, fieldwork, modelling, and AI, apply for a PhD with myself, Phil Fenberg, @michaeltburrows.bsky.social, and Steve Hawkins @thembauk.bsky.social www.findaphd.com/phds/project...

14.10.2025 09:16 β€” πŸ‘ 2    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0
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Characterizing Rocky Intertidal Biodiversity Using Environmental DNA Metabarcoding From Local to National Scales We assess the resolution of eDNA metabarcoding for detecting rocky intertidal taxa across three spatial scalesβ€”national, regional, and local. Distinct eDNA signals were observed at each scale, with c...

Groundbreaking work on the use of eDNA for characterizing intertidal biodiversity, comparing it to my MarClim time-series from @dinathebiologist.bsky.social, myself, Tom Webb, Helen Hipperson, and Matt Spencer @thembauk.bsky.social @livuniresearch.bsky.social onlinelibrary.wiley.com/doi/10.1002/...

13.10.2025 10:43 β€” πŸ‘ 12    πŸ” 8    πŸ’¬ 0    πŸ“Œ 0
Green Careers Conference 2025, hosted by British Ecological Society at Linnean Society on November 5, 2025.

Green Careers Conference 2025, hosted by British Ecological Society at Linnean Society on November 5, 2025.

πŸ€Want to know how to build your career in the environmental and conservation sector?

13.10.2025 10:02 β€” πŸ‘ 6    πŸ” 7    πŸ’¬ 1    πŸ“Œ 1
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Characterizing Rocky Intertidal Biodiversity Using Environmental DNA Metabarcoding From Local to National Scales We assess the resolution of eDNA metabarcoding for detecting rocky intertidal taxa across three spatial scalesβ€”national, regional, and local. Distinct eDNA signals were observed at each scale, with c...

🚨 NEW PAPER: eDNA in the Intertidal 🧬

We explored how eDNA reveals marine biodiversity across UK rocky shores from local patterns to national trends 🌊

Read it in Journal of Environmental DNA πŸ‘‰ onlinelibrary.wiley.com/doi/10.1002/...

#eDNA #Intertidal #Biodiversity #PhDlife

13.10.2025 07:20 β€” πŸ‘ 14    πŸ” 4    πŸ’¬ 2    πŸ“Œ 0

On the edge of my seat here to see what happens next!

10.10.2025 09:30 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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Delighted with my past self for pre-ordering this beautiful book from @stevehaddock.bsky.social, then promptly forgetting about it, so that its arrival yesterday was a lovely surprise!

09.10.2025 11:41 β€” πŸ‘ 7    πŸ” 1    πŸ’¬ 1    πŸ“Œ 0

Abstract submissions for @wcmb2026.bsky.social are now OPEN!

Want to contribute your ideas, research, and insights? Start preparing your abstract today!

Details: www.wcmb2026.org/call-abstracts

@unoceandecade.bsky.social @vliz.be #WCMB2026 #marinebiodiversity

30.09.2025 13:29 β€” πŸ‘ 5    πŸ” 7    πŸ’¬ 1    πŸ“Œ 2

Personally I'm surprised how small and furry they used to be (assuming the thumbnail is an accurate reconstruction?)

09.10.2025 08:37 β€” πŸ‘ 4    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

(label_wrap was new to me too!)

07.10.2025 14:33 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
Free a plot from various alignments β€” free While the purpose of patchwork is often to align plots by their various parts, sometimes this doesn't cut it and we want to compose plots without alignment. The free() function tells patchwork to trea...

Thanks for sharing! A related thing I recently discovered is using free() in patchwork if you use the switch-x-and-y-axes technique and don't want subsequent plots you're assembling to leave a massive white space where the long axis labels are - see patchwork.data-imaginist.com/reference/fr...

07.10.2025 14:31 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

OMG I have this problem All. The. Time. A great post outlining useful strategies. Did not know about label_wrap either! OOOO!

07.10.2025 13:44 β€” πŸ‘ 13    πŸ” 1    πŸ’¬ 2    πŸ“Œ 0
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OIST is seeking up to four tenure-track or tenured faculty in Ecology, Environmental Science, Earth Science, and Oceanography. Application deadline: Oct 15. Please share. Thx!
www.oist.jp/careers/facu...

07.10.2025 10:01 β€” πŸ‘ 46    πŸ” 62    πŸ’¬ 1    πŸ“Œ 1

Periodic reminder of the magic of apache arrow / parquet:

arrow::write_parquet(`5.7M row x 10 col dataframe`,
sink = here::here("data",
"somehow only a 10MB file.parquet"),
compression = "gzip")

06.10.2025 20:36 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0
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2025 mood

06.10.2025 18:25 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Watching this live I said 'I'm sure that's been shown to be untrue' - another illustration of how following @fullfact.org on here can win you the admiration and respect of your family and friends…

06.10.2025 15:32 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Good luck! I was gutted that I was unable to meet our internal deadline, although on the plus side it got me out of writing one…

06.10.2025 14:45 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
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A critique of pure stupidity: understanding Trump 2.0 If the first term of Donald Trump provoked anxiety over the fate of objective knowledge, the second has led to claims we live in a world-historical age of stupid, accelerated by big tech. But might th...

Interesting long read about the deep hole we’re in. All we have to do now is dig up.
www.theguardian.com/news/2025/oc...

02.10.2025 07:56 β€” πŸ‘ 11    πŸ” 5    πŸ’¬ 0    πŸ“Œ 0
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πŸŒπŸ“’ Postdoc alert | 3-yr starting 1/1/26

Understand how ecosystem stability is changing across space and through time using niche modelling, pinpoint at-risk species/regions, and build tools that drive conservation actionπŸŒΏπŸ§­πŸ“ˆ

πŸ‘‰ tinyurl.com/2w2we5z8

#Ecology #Jobs #Biodiversity #RStats

01.10.2025 08:45 β€” πŸ‘ 35    πŸ” 36    πŸ’¬ 1    πŸ“Œ 2

Yes I think a few links are dead - e.g. Sean Anderson's really useful post on gamma glms does not seem to exist any more (at least not where it is linked). Still a useful starting point though!

01.10.2025 16:30 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

I do of course have 'spare rough code.R' or similar inside every project. But I take it one step further and have a dedicated r-doodling.RProj for stuff where I'm not even sure yet what project it fits into…

01.10.2025 11:06 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
an old building with climbing plants around the door with purple flowers. The sign above the door says school of botany 1907

an old building with climbing plants around the door with purple flowers. The sign above the door says school of botany 1907

Come work with us - The School of Natural Sciences at Trinity College Dublin is looking for a tenure track assistant professor in plant biodiversity and conservation πŸ§ͺ🌏🌾 my.corehr.com/pls/trrecrui...

Drop me a message if you want to chat about what it's like to work here or live in Ireland.

01.10.2025 09:15 β€” πŸ‘ 44    πŸ” 43    πŸ’¬ 4    πŸ“Œ 3
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Separating Macroecological Pattern and Process: Comparing Ecological, Economic, and Geological Systems Theories of biodiversity rest on several macroecological patterns describing the relationship between species abundance and diversity. A central problem is that all theories make similar predictions f...

Classic macroecological laws-long held as signatures of biological systems-also emerge in economic and geological systems. The real signal lies not in the static universal patterns, but in how those patterns shift with scale 🌐πŸ§ͺ #scaling #macroecology journals.plos.org/plosone/arti...

01.10.2025 08:16 β€” πŸ‘ 38    πŸ” 18    πŸ’¬ 4    πŸ“Œ 1
Overview of R Modelling Packages Overview of modelling strategies and packages. Which model do I need for my data?

Useful overview of R packages / functions for modelling different kinds of response variables (continuous, proportional, counts, bounded, zero-inflated, etc.) in a regression framework, with mixed models and Bayesian options too: strengejacke.github.io/regressionmo...

01.10.2025 09:59 β€” πŸ‘ 10    πŸ” 6    πŸ’¬ 0    πŸ“Œ 1
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My son and I bond over Brooklyn 99. He's been a bit unwell, and I've been channeling Captain Holt in my messages. It comes surprisingly easily to me.

30.09.2025 14:52 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Hmm. On reflection you're right - we perhaps don't want to go too far down this route…

30.09.2025 14:32 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0
PDRA in Marine Mammal Ecology (D10/25.DR) β€” Scottish Association for Marine Science, Oban UK SAMS is the UK's oldest independent marine science organisation delivering research, education and enterprise for a sustainable marine environment - The Scottish Association for Marine Science

www.sams.ac.uk/vacancies/pd...

30.09.2025 13:18 β€” πŸ‘ 2    πŸ” 4    πŸ’¬ 0    πŸ“Œ 0

You're doing it down. It's also very useful when you have to write something that you know no-one is ever going to read.

30.09.2025 13:18 β€” πŸ‘ 1    πŸ” 0    πŸ’¬ 1    πŸ“Œ 0

Really interesting paper. And, as an aside - quite pleasing to see birds chucked into an 'other vertebrates' category, for a change…

30.09.2025 12:54 β€” πŸ‘ 0    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

Just uploaded my talk - really looking forward to this conference!

30.09.2025 12:16 β€” πŸ‘ 2    πŸ” 0    πŸ’¬ 0    πŸ“Œ 0

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