Anton Goloborodko's Avatar

Anton Goloborodko

@golobor.bsky.social

A bio-physicist turned phys-biologist, building models and software in genome biology. 3D genome structure in mitosis | DNA repair | meiosis. A group leader at @IMBA_Vienna. Dad x2.

1,561 Followers  |  1,170 Following  |  140 Posts  |  Joined: 11.09.2023  |  1.9537

Latest posts by golobor.bsky.social on Bluesky

Off he is ...

Ulrich is one of the most remarkable scientists I had the pleasure to work with. I learned so much from him about biochemistry, proteins, structural biology, and so much more.

Great people make great things happen.
The really great people are rare.
Ulrich is one of them ...

12.10.2025 21:15 โ€” ๐Ÿ‘ 23    ๐Ÿ” 7    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
Loops of DNA Equipped Ancient Life To Become Complex | Quanta Magazine New work shows that physical folding of the genome to control genes located far away may have been an early evolutionary development.

Connecting different โ€œneighborhoodsโ€ of a genome has many benefits. For one, it can allow a gene to be regulated by multiple sources, increasing the possibility for more complexity.

10.10.2025 20:04 โ€” ๐Ÿ‘ 20    ๐Ÿ” 5    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Staff Scientist About EMBL-EBI EMBLโ€™s European Bioinformatics Institute is a data powerhouse, utilised on a global scale to advance scientific discovery through bioinformatics and solutions to some of the worldโ€™s mos...

I am hiring! - looking for a Staff Scientist to co-run my research group with me. Staff Scientist is a senior professional scientist role at EMBL. Please forward to people you might know who could be interested! embl.wd103.myworkdayjobs.com/en-US/EMBL/j...

10.10.2025 07:30 โ€” ๐Ÿ‘ 72    ๐Ÿ” 78    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 3
Post image

How do SMC complexes load onto DNA to get ready for loop extrusion?

@roisnehamelinf.bsky.social & co discovered that Wadjet, an SMC complex involved in bacterial DNA immunity, performs some impressive molecular gymnastics ๐Ÿคธโ€โ™‚๏ธ๐Ÿคธโ€โ™‚๏ธ๐Ÿคธโ€โ™‚๏ธ.

Check out the new paper: www.cell.com/molecular-ce...

09.10.2025 14:43 โ€” ๐Ÿ‘ 87    ๐Ÿ” 39    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 4

once-in-a-lifetime opportunity!!

09.10.2025 14:55 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

The Vienna BioCenter PhD Program application deadline is approaching: October 10!

Join one of Europeโ€™s premier life science campuses, home to cutting-edge research across all areas of biology.
Apply and start your scientific journey in Vienna!

training.vbc.ac.at/phd-program/

#PhD #LifeSciences

05.10.2025 09:35 โ€” ๐Ÿ‘ 30    ๐Ÿ” 22    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Post image

Passionate about #SystemsBiology and ready to lead your own research group?
Join us at the forefront of discovery โ€” apply now to be a #GroupLeader at the NOVA Institute for Medical Systems Biology, in beautiful Lisbon, PT!

Appl. by Oct 8:
www.nature.com/naturecareer...

#ScienceJobs #JobOffer

29.09.2025 09:52 โ€” ๐Ÿ‘ 11    ๐Ÿ” 15    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 3

BREAKING: Elon Musk just became first person in history to hit $500 billion in net worth.

02.10.2025 01:42 โ€” ๐Ÿ‘ 47    ๐Ÿ” 10    ๐Ÿ’ฌ 26    ๐Ÿ“Œ 13
Post image

he's left-handed!

30.09.2025 13:25 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0
ะกะพั€ะพะบะธะฝ, ะกะตั€ะณะตะน ะŸะธั‚ะธั€ะธะผะพะฒะธั‡ โ€” ะ’ะธะบะธะฟะตะดะธั

there seems to be a wiki page in RU (but not in EN): ru.wikipedia.org/wiki/%D0%A1%...

30.09.2025 13:24 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Preview
Itโ€™s goodnight Vienna as Paris sleeper train to Austria and Berlin hit by cuts Some Nightjet services suspended from mid-December after French withdrawal amid public budget crisis

Paris-Berlin sleeper: low carbon, 2 years old, constantly full, but currently losing SNCF a few million EUR/yr

Intl Jet fuel tax exemptions are 80 years old and cost the EU 22 million EUR/yr for the Paris-Berlin route alone.

And you're cutting... the sleeper?

www.theguardian.com/travel/2025/...

29.09.2025 21:31 โ€” ๐Ÿ‘ 488    ๐Ÿ” 274    ๐Ÿ’ฌ 12    ๐Ÿ“Œ 11

as much as I love Python - did it decrease the likelihood of typing errors?..

29.09.2025 15:10 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Post image

Assistant/Associate Professor in Structural Biology, Biophysics or Biological Imaging

www.biozentrum.unibas.ch/open-positio...

#biozentrum #University #Basel #Professor #Structural #Biology #Biophysics #Biological #Imaging

29.09.2025 14:58 โ€” ๐Ÿ‘ 49    ๐Ÿ” 53    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 5
Preview
Loop extrusion provides mechanical robustness to chromatin Chromosomes are complex biopolymers folded into dynamic loops via a loop extrusion process and may experience various mechanical forces in vivo . We develop a force-dependent model of chromatin loop e...

New preprint from the lab !! Loop extrusion may provide mechanical robustness to chromatin. Great work by Hossein Salari. @cnrs.fr @lbmcinlyon.bsky.social
www.biorxiv.org/content/10.1...

29.09.2025 13:24 โ€” ๐Ÿ‘ 19    ๐Ÿ” 13    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Do you like theoretical biology, mathematical&conceptual modelling and want to apply yourself to cutting-edge research at all levels of biology, from molecules to ecosystems?

Come to EMBL! Scope includes physics-based models, emergence, statistics, ML/AI
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...

29.09.2025 07:03 โ€” ๐Ÿ‘ 45    ๐Ÿ” 35    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Tenure-track Position in Biophysics at Carnegie Mellon University, Department of Physics

Location: Pittsburgh, PA
Open Date: Sep 19, 2025

Description
The Department of Physics at Carnegie Mellon University invites applications for a tenure-track faculty position in biophysics. The appointment is intended to be at the Assistant Professor level, but exceptional candidates at a higher level may also be considered. We seek outstanding candidates with a strong record in cellular and subcellular biophysics. Topics of particular interest include, but are not limited to, uncovering how key characteristics of living systems arise from the interplay between supramolecular cellular structures, how the emergent cellular circuitry defines goals and enables robust decision making, and how metabolic resources are allocated. This encompasses understanding of how information is learned, stored, transduced, and processed across subcellular structures. Applicants with theoretical, data science, or experimental backgrounds within biological physics are encouraged to apply. The ideal candidate will strengthen and extend research programs of current biophysics faculty in the Department of Physics and collaborate with broader life science activities across many departments at CMU and the wider Pittsburgh area.

More details on Interfolio: https://apply.interfolio.com/174360

Tenure-track Position in Biophysics at Carnegie Mellon University, Department of Physics Location: Pittsburgh, PA Open Date: Sep 19, 2025 Description The Department of Physics at Carnegie Mellon University invites applications for a tenure-track faculty position in biophysics. The appointment is intended to be at the Assistant Professor level, but exceptional candidates at a higher level may also be considered. We seek outstanding candidates with a strong record in cellular and subcellular biophysics. Topics of particular interest include, but are not limited to, uncovering how key characteristics of living systems arise from the interplay between supramolecular cellular structures, how the emergent cellular circuitry defines goals and enables robust decision making, and how metabolic resources are allocated. This encompasses understanding of how information is learned, stored, transduced, and processed across subcellular structures. Applicants with theoretical, data science, or experimental backgrounds within biological physics are encouraged to apply. The ideal candidate will strengthen and extend research programs of current biophysics faculty in the Department of Physics and collaborate with broader life science activities across many departments at CMU and the wider Pittsburgh area. More details on Interfolio: https://apply.interfolio.com/174360

I am super excited to announce that we have a tenure-track faculty position in biophysics open in the Department of Physics at Carnegie Mellon! ๐Ÿงช

Interfolio link: apply.interfolio.com/174360

PLEASE, share widely across the blue skies!

Let me briefly explain what we're looking for:

1/10

26.09.2025 15:35 โ€” ๐Ÿ‘ 95    ๐Ÿ” 85    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 5

Join us at the Hubrecht Institute in Utrecht to start your research group! Fantastic scientific environment, strong support, and nice colleagues :) Apply and please share broadly in your network.

28.09.2025 09:43 โ€” ๐Ÿ‘ 16    ๐Ÿ” 23    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

Congratulations to the team!! ๐Ÿ‘๐ŸŽ‰๐ŸŽˆ๐Ÿ˜บ

25.09.2025 08:07 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

This hypothesis provides a (potential) explanation to many paradoxes and confusions in the field of enhancer-promoter interactions. An absolute must read!!

25.09.2025 06:39 โ€” ๐Ÿ‘ 7    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

YAAAAAYY!!
@lucagiorgetti.bsky.social - where is an obligatory bsky thread? :))

24.09.2025 21:03 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Scientists are loving our latest study! ๐ŸŽ‰
Thrilled that our @elife.bsky.social research article on RAD51 filament strand exchange is Augustโ€™s most-read in Structural Biology. A landmark for understanding DNA repair. ๐Ÿงฌ

23.09.2025 09:12 โ€” ๐Ÿ‘ 11    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Excited to share our first preprint! We developed an image-based pooled screen to uncover regulators of HP1 condensates and discovered a link with intronic RNA and RNA processing. ๐Ÿ‘ Congrats to all authors, especially Matthew, Shaopu & Chris!

22.09.2025 19:05 โ€” ๐Ÿ‘ 21    ๐Ÿ” 8    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
Post image

Asking BlueSky for help: For a review, I am trying to accurately credit the first paper that measured pairwise 3D distances between 2 pieces of DNA on the same chromosome (or cosmid). Is Trask 1989 the first?
I know of earlier single-locus papers (1982).
www.sciencedirect.com/science/arti...

21.09.2025 18:56 โ€” ๐Ÿ‘ 76    ๐Ÿ” 34    ๐Ÿ’ฌ 5    ๐Ÿ“Œ 2
Preview
The eukaryotic replisome intrinsically generates asymmetric daughter chromatin fibers DNA replication is molecularly asymmetric, due to distinct mechanisms for lagging and leading strand DNA synthesis. Whether chromatin assembly on newly replicated strands is also asymmetric remains un...

Some (+)ve news to lighten another heavy weekend: our latest preprint (c/o Mattiroli + Ramani labs) is up!
www.biorxiv.org/content/10.1...
A tour-de-force by 1st authors Bruna Eckhardt & @palindromephd.bsky.social, focusing on chromatin replication. RTs welcome; tweetorial in 3,2...(1/n)

20.09.2025 16:10 โ€” ๐Ÿ‘ 74    ๐Ÿ” 40    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 2

๐ŸŽ‰๐ŸŽŠ๐Ÿฅณ

19.09.2025 06:23 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Video thumbnail

Thrilled that our work is now finally out in Nature Comms!
rdcu.be/eG3vP

We reveal cryo-EM structures of the MRN complex bound to DNA & TRF2 - showing how DNA breaks are sensed and regulated at telomeres.
Fantastic work by first authors @yilanfan.bsky.social @filizkuybu.bsky.social & Hengjun!

18.09.2025 16:09 โ€” ๐Ÿ‘ 70    ๐Ÿ” 21    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 4
Careers | Emory University | Atlanta GA

Now hiring a computational postdoc (evolutionary genomics, molecular evolution) in my lab at Emory University.
If youโ€™re interested in population genetics, fitness landscapes, and viral evolution โ€” get in touch.
faculty-emory.icims.com/jobs/151181/...

18.09.2025 15:38 โ€” ๐Ÿ‘ 14    ๐Ÿ” 27    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
Is enhancer-driven gene regulation all wrapped up? - Nature Reviews Genetics In this Comment, Wendy Bickmore discusses mechanistic models of how 3D genome organization facilitates communication between distant enhancers and their target promoters to regulate gene expression.

Very interesting new @wbickmor.bsky.social commentary on the mechanistic mystery that is very distal enhancer-promoter interactions www.nature.com/articles/s41...

17.09.2025 12:43 โ€” ๐Ÿ‘ 46    ๐Ÿ” 15    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
Preview
800 Arbeitsplรคtze kรถnnten durch Kรผrzungen bei Forschung wegfallen FWF-Prรคsident Christof Gattringer befรผrchtet ein "massiv zurรผckgehendes Budget" fรผr Grundlagenforschung in ร–sterreich

#FWF Prรคsident Christof Gattringer befรผrchtet starke Budgeteinsparungen fรผr #Grundlagenforschung in ร–sterreich: 800 Arbeitsplรคtze kรถnnten durch Kรผrzungen wegfallen. Die Unis wรผrden dadurch weiter an Boden bei der Spitzenforschung verlieren.

via @derstandard.at ๐Ÿ‘‰
www.derstandard.at/story/300000...

16.09.2025 13:06 โ€” ๐Ÿ‘ 7    ๐Ÿ” 6    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
A molecular switch orchestrates the nuclear export of human messenger RNA The nuclear export of messenger RNA (mRNA) is a key step in eukaryotic gene expression ([Kรถhler and Hurt, 2007][1]). Despite recent insights into the packaging of newly transcribed mRNAs into ribonucl...

Dream collaboration with the groups of Torben Heick Jensen (@heick.bsky.social; @au.dk) and Clemens Plaschka (@impvienna.bsky.social). Building in part on the incredible work from Ulrich Hohmann on human mRNA export.
www.biorxiv.org/content/10.1...

17.09.2025 12:42 โ€” ๐Ÿ‘ 30    ๐Ÿ” 7    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

@golobor is following 20 prominent accounts