Modern Python Project GitHub Template
TL;DR: I created a freely available template to facilitate setting up “modern” Python projects.
Interested in Python programming and good software engineering practices? Check out my newest blog post where I introduce a "modern Python" GitHub repository template and talk about my motivation for its creation! mmzdouc.github.io/posts/2025/1...
22.10.2025 13:58 — 👍 8 🔁 4 💬 1 📌 1
Unsplash image of the Earth, mostly the nightside with a tracery of city lights on every continent.
OK, this is wild.
In September 2023, geophysicists across the world started monitoring a very odd signal coming from the ground under them.
It was picked up in the Arctic. And Antarctica. It was detected everywhere, every 90 seconds, as regular as a metronome, for *nine days*.
What the HELL?
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12.05.2025 15:20 — 👍 22446 🔁 7714 💬 744 📌 1490
Tariffs xkcd.com/3073
08.04.2025 00:03 — 👍 31385 🔁 8771 💬 258 📌 466
Hahaha that's awesome! Let me know if you have any questions; always happy to chat!
27.02.2025 13:50 — 👍 1 🔁 0 💬 0 📌 0
Flowchart that shows how gene modules are found from co-expression data, connected using TFBS enrichment, and fitted to experimental data.
New preprint!
BADDADAN mechanistically models time-series response of >1000 genes to stress by clustering first, then fitting an ODE model.
Demonstrated on real Arabidopsis data: interpretable, coherent modules, plus new and existing biological insights.
doi.org/10.1101/2025.02.18.638670
24.02.2025 12:47 — 👍 3 🔁 0 💬 1 📌 0
A fully open access, peer-reviewed journal published jointly by Oxford University Press and the International Society for Computational Biology.
Plant Scientist
R&D Trait Program Manager (Biotic Stress) @KWSGroup.bsky.social
Web: https://linktr.ee/somssich
Personal Account
May the #Roots be with you!
Associate Professor @ UCLouvain.
#OpenSci #SciComm #plant #drought #cereals #gamification #bread #teaching. 👩🦰👩 #dad.
#StandUpForScience
Pronoms : he/him
Personal webiste : https://www.guillaumelobet.be/
Scientist & Innovator | Expert in Genetics, Molecular Biology, Agriculture & Bioeconomy | Passionate about modelling, future studies, sustainable agriculture and research-driven innovation | Haiku
Professor, Ecosystem Modelling, Hawkesbury Institute for the Environment, Western Sydney U. Ecophysiologist and #DeadTreeDetective
┣ research-research: crop ecology, 🌻, {🌾+☘️}
┃ INRAE, FR https://orcid.org/0000-0001-7225-936X
┣ research-creation: creative coding, ink
┃ http://art.casadebaig.net
┣ #rstats, and 🚲 enthusiast
Soil and rhizosphere science and mathematical modelling. Professor of engineering.
Soil scientist & agronomist (PhD, Habil/HDR) @cirad.bsky.social #SOC #GHG #ClimateChange @4per1000.bsky.social
Editor-in-Chief: EGU SOIL journal @egu-sss.bsky.social
Assoc. Editor: Agroforestry Systems
https://agents.cirad.fr/R%C3%A9mi+Cardinael/Homepage
Postdoctoral researcher. Working on metabolic modeling of plant systems to identify engineering targets for improved food security and sustainability. He/him
Crop modelling and sensing | Photosynthesis | Gas exchange | Energy balance
Working on modeling land surface processes and climate mostly for the Earth but also for Mars. Working at the University of Reading. Views are my own.
We are a group of scientists unraveling the secrets of the tropical roots. Our method: compile, integrate and discuss root data. Please join us through this link. https://tropiroottrait.github.io/TropiRootTrait/index.html
Associate prof in evolutionary genetics at University of South Carolina.
wessingerlab@github.io
Assistant Professor @ CEE UIUC. Multiscale plant modeling and engineering. https://matthews.cee.illinois.edu
Reader in Predictive and Systems Biology. Computational Naturalist. Interested in Morphodynamics, from cell & tissue polarity to swirling plant hormones.
Head of plant genomics at Earlham Institute, #Circadian, #Genomics, #Bioinformatics, #wheat, #Arabidopsis. Note, my use of English is unconventional. Co-founder of TraitSeq. Programme lead for DECODING BIODIVERSITY https://tinyurl.com/4k8b8x2x
Lab interested in the evolution of grasses, identifying traits underlying agronomic traits and the circadian clock
Plant breeding and genetics, big data, prediction, spanning from functional genomics to satellitte images, professor at Aarhus University, Denmark
Plant development and evolution researcher.
Assistant Professor at the Center for Quantitative Genetics and Genomics, Aarhus University. Quantitative genetics, computational biology, and plant breeding.
