Samantha Wittke's Avatar

Samantha Wittke

@samumantha.bsky.social

Research Software Engineer at CSC- IT Center for Science, Finland / CodeRefinery.org / Elixir-FI / Geoinformatics & Earth Observation / Open Science, Training and RSE community enthusiast / ๐ŸŒฒ Outdoorsy / โš’๏ธ๐Ÿ–Œ๏ธ๐ŸงถCrafty

117 Followers  |  251 Following  |  26 Posts  |  Joined: 31.01.2025  |  1.859

Latest posts by samumantha.bsky.social on Bluesky

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Dr. Heidi Seibold is speaking at TEDxTUM 2025! ๐ŸŽค
Sheโ€™s asking: How do we make science serve its purpose again?
If you care about Open Science & better research culture โ€” this talk is for you.
๐Ÿ“… Nov 8, 2025
๐ŸŽŸ๏ธ Discounted tickets:
buff.ly/UGx2t6t
#TEDxTUM #OpenScience #ResearchCulture

04.11.2025 14:41 โ€” ๐Ÿ‘ 4    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Now I'm also looking for a research software engineer to implement a pile of research results to R packages loo, posterior, bayesplot, projpred, priorsense, brms or/and Python packages ArviZ, Bambi and Kulprit. Apply by email with no specific deadline (see contact info at users.aalto.fi/~ave/)

03.11.2025 11:13 โ€” ๐Ÿ‘ 54    ๐Ÿ” 50    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 2
Logo of the Sยณ School โ€“ Sustainable Scientific Software School

Logo of the Sยณ School โ€“ Sustainable Scientific Software School

๐Ÿš€ Build sustainable, reproducible research software!

Learn principles & hands-on practices of open, high-quality, scientific software development at the Sยณ School ๐Ÿ—“๏ธ 14โ€“21 January 2026, #LAPP, Annecy๐Ÿ‡ซ๐Ÿ‡ท

๐Ÿ“… Apply by 14 Nov: indico.in2p3.fr/event/36319

Supported by #EVERSE & @oscarsproject.bsky.social

14.10.2025 17:00 โ€” ๐Ÿ‘ 4    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Purple Nordic-RSE text under half a snowflake in pixel style surrounded by the sentence "happy international RSE day".

Purple Nordic-RSE text under half a snowflake in pixel style surrounded by the sentence "happy international RSE day".

๐ŸŽ‰ Happy international RSE day from the Nordics!

We have got some exciting events brewing for the future, including the Nordic Basic Scientific Computing daysย (No BS Computing) in Otaniemi, FI, in February and the 3rd Nordic-RSE conference in Tromsรธ, NO in June.

09.10.2025 12:51 โ€” ๐Ÿ‘ 3    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
An array of 9 purple discs on a blue background. Figure from Hinnerk Schulz-Hildebrandt.

An array of 9 purple discs on a blue background. Figure from Hinnerk Schulz-Hildebrandt.

A nice shift in perceived colour between central and peripheral vision. The fixated disc looks purple while the others look blue.

The effect presumably comes from the absence of S-cones in the fovea.

From Hinnerk Schulz-Hildebrandt:
arxiv.org/pdf/2509.115...

24.09.2025 10:16 โ€” ๐Ÿ‘ 701    ๐Ÿ” 262    ๐Ÿ’ฌ 30    ๐Ÿ“Œ 42

Well deserved ! ๐Ÿ‘

12.09.2025 18:12 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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CodeRefinery workshop September/October 2025 Free workshop on git, testing, documentation, and more in a workshop - for researchers and scientists.

๐Ÿ“ฃ Registration for the CodeRefinery workshop starting Septemberโ€ฏ9th is still open.

๐Ÿค Dive into Git and other tools for more reproducible research, with setup support and a shell crash course in the mix - designed for researchers, by researchers.

More info: coderefinery.github.io/2025-09-09-w...

27.08.2025 05:53 โ€” ๐Ÿ‘ 1    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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๐Ÿ‡ธ๐Ÿ‡ช The second Nordic-RSE in-person conference took place in Gothenburg, Sweden, at the end of May. Find out more about the event through the words of #SSIFellow @samumantha.bsky.social in this blog originally posted on the Nordic RSE website: www.software.ac.uk/blog/nordic-...

01.08.2025 07:58 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Thank you for having me! It was an exciting visit and great pleasure to talk about @coderefinery.org and @nordic-rse.bsky.social and all the discussions around training, HPC and Research Software!

23.07.2025 10:55 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Great first day!
First Minisymposium on Research Software quality showed how work done within Elixir can reach beyond life science communities via projects like @eosc-everse.bsky.social ! Can't wait to see where this is going ๐Ÿคฉ

02.06.2025 20:05 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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JOSS re-evaluated as JUFO 1 in Finland, expands its definition - Nordic RSE We bring together the community of people writing and contributing to research software from Nordic universities, research institutes, companies and other organizations to share knowledge, to organize...

It's great to see that a national research evaluation organization, the Finnish Publication Forum (JUFO), has rated @joss-openjournals.bsky.social as level 1, recognizing its scholarly value

Frankie Robertson helped make this happen, with Nordic-RSE, & wrote about it: nordic-rse.org/blog/joss-ju...

28.05.2025 22:46 โ€” ๐Ÿ‘ 7    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

โœจ

28.05.2025 12:26 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Engaging talks and a lovely crowd. So happy to have found "my people" that I get to learn so much from every day โค๏ธ

Thanks to other organizers and all participants for making this a fantastic event!

Blog posts and some pictures will follow โœจ

22.05.2025 06:20 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Picture of Nordic-RSE stickers (snowflake and the term Nordic-RSE in purple pixel style) on a table

Picture of Nordic-RSE stickers (snowflake and the term Nordic-RSE in purple pixel style) on a table

The Nordic-RSE conference 2025 #NRSE25 has officially started!!! โœจ

We are excited to welcome ~45 delegates from all over the Nordics (and even beyond) at Gรถteborg university!

20.05.2025 07:50 โ€” ๐Ÿ‘ 6    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
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Successful & Beautiful Poster Presentations Scientific posters are an integral part of presenting your research. However, condensing all findings on just one canvas is truly challenging. This 1h crash course is designed for graduate and post gr...

๐Ÿ“ฏ Free online workshop announcement!

Successful & Beautiful Poster Presentations, Tina Lang

"Scientific posters are an integral part of presenting your research. However, condensing all findings on just one canvas is truly challenging...

16.05.2025 10:49 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

"If someone has opened the door for you, make sure to keep it open."

@malvikasharan.bsky.social #CollabW25

Really enjoyed the opening panel this morning, thank you to all the panellists for their insights!

14.05.2025 10:39 โ€” ๐Ÿ‘ 8    ๐Ÿ” 8    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Last call, especially for people in the area around Gรถteborg:

Join us on 20.+21.05.2025 for the second in-person Nordic-RSE conference to meet fellow research software enthusiasts and hear about cool tools and projects.

29.04.2025 07:27 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
sometimes annoying things happen in the terminal:

    why doesnโ€™t Ctrl+C quit??
    why canโ€™t I select text?

these things arenโ€™t random: different โ€œtypesโ€ of programs have different conventions for how you interact with them!

here are some categories of programs & their conventions!
1. REPLs

(python3, your shell)
you type code, press Enter and it runs the code

rules:

    quit with Ctrl+D (only works on an empty line)
    usually you have a million keyboard shortcuts for editing text
    usually thereโ€™s history

2. full screen โ€œTUIโ€s

(less, htop, ncdu, lazygit, mtr)

rules:

    quit with q (usually)
    you can often navigate with arrow keys
    often ? will open the help
    to select text with the mouse, press Shift

3. noninteractive programs

or slightly interactive
(grep, git, sort, scp)

you start it, maybe it asks you a question or two, it does stuff, and it exits

rules:

    quit with Ctrl+C

4. wrappers

(ssh, env, tmux, rlwrap, unbuffer)
these wrap other terminal programs in some way

rules:

    when the program(s) theyโ€™re wrapping exits, they exit

5. other

lots of things donโ€™t fit info these 4 categories: text editors, games, email clients, IRC clients, โ€ฆ

rules:

    I avoid these unless (like with vim) Iโ€™ve made a special effort to learn the program

sometimes annoying things happen in the terminal: why doesnโ€™t Ctrl+C quit?? why canโ€™t I select text? these things arenโ€™t random: different โ€œtypesโ€ of programs have different conventions for how you interact with them! here are some categories of programs & their conventions! 1. REPLs (python3, your shell) you type code, press Enter and it runs the code rules: quit with Ctrl+D (only works on an empty line) usually you have a million keyboard shortcuts for editing text usually thereโ€™s history 2. full screen โ€œTUIโ€s (less, htop, ncdu, lazygit, mtr) rules: quit with q (usually) you can often navigate with arrow keys often ? will open the help to select text with the mouse, press Shift 3. noninteractive programs or slightly interactive (grep, git, sort, scp) you start it, maybe it asks you a question or two, it does stuff, and it exits rules: quit with Ctrl+C 4. wrappers (ssh, env, tmux, rlwrap, unbuffer) these wrap other terminal programs in some way rules: when the program(s) theyโ€™re wrapping exits, they exit 5. other lots of things donโ€™t fit info these 4 categories: text editors, games, email clients, IRC clients, โ€ฆ rules: I avoid these unless (like with vim) Iโ€™ve made a special effort to learn the program

types of terminal programs

wizardzines.com/comics/types...

22.04.2025 15:04 โ€” ๐Ÿ‘ 163    ๐Ÿ” 31    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1

Looking forward to reading the outcomes!

16.04.2025 15:19 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Exclusive: the most-cited papers of the twenty-first century A Nature analysis reveals the 25 highest-cited papers published this century and explores why they are breaking records.

"But the most highly cited papers generally arenโ€™t the most famous scientific discoveries. Rather, these works tend to describe scientific methods or software, the workhorses on which scientists depend."

From doi.org/10.1038/d415...

#ResearchSoftware

16.04.2025 14:15 โ€” ๐Ÿ‘ 5    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 3
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Biggest commitment to a 3 second joke I've ever seen

09.04.2025 06:33 โ€” ๐Ÿ‘ 88931    ๐Ÿ” 27581    ๐Ÿ’ฌ 872    ๐Ÿ“Œ 1261
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Why's it hard to teach data cleaning? Vicki Boykis did a great post about ghost knowledge this past week. โ€œGhost knowledgeโ€ being the term she cites from David Maclever for unwritten knowledge thatโ€™s only known to people of a field, like ...

An oldie but goodie from @randyau.com. #databs
www.counting-stuff.com/whys-it-hard...

03.04.2025 12:46 โ€” ๐Ÿ‘ 55    ๐Ÿ” 14    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1

So happy to see our work come together this way! ๐Ÿคฉโœจ๐Ÿš€

LiPheStream: 458 single tree #LiDAR point cloud time series from Hyytiรคlรค, Finland (doi.org/10.1038/s415...)

Browse and download single tree data via pytreedb : pytreedb.geog.uni-heidelberg.de

Big thanks to everyone making this possible ๐Ÿ™Œ

02.04.2025 20:22 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
2025 Nordic-RSE conference 2025 Nordic-RSE conference

๐Ÿ“ข Abstract submissions for the Nordic-RSE Conference 2025 are now closedโ€”thank you to everyone who submitted! ๐ŸŽ‰
But it's not too late to contribute โ€” poster submissions are still open until April 18th!
Share your work with the community.
Info on website: nordic-rse.org/nrse2025/

#NRSE25 #RSEng

01.04.2025 16:43 โ€” ๐Ÿ‘ 3    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Week 1 of the workshop is doneโ€”on to week 2!

Missed a session? Catch up on YouTube; all materials on our website (see comments)

Next week:
โšก Tue: Reproducible research & social coding
โšก Wed: Jupyter & documentation
โšก Thu: Modular code & automated testing

Each session is self-contained. Join us!

28.03.2025 09:38 โ€” ๐Ÿ‘ 1    ๐Ÿ” 1    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

We are now live on twitch: twitch.tv/coderefinery

You can still register to interact with the instructors via collaborative notes: coderefinery.github.io/2025-03-25-w...

25.03.2025 08:49 โ€” ๐Ÿ‘ 4    ๐Ÿ” 1    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

๐Ÿ”ด Listen to SSI director @npch.bsky.social discuss the Research Software Maintenance Fund on the latest episode of the @sustainoss.bsky.social podcast.

You can also find out about the RSMF at www.software.ac.uk/programmes/r...

24.03.2025 10:39 โ€” ๐Ÿ‘ 3    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

๐Ÿš€ The #CodeRefinery workshop kicks off tomorrow with over 300 participants! Some of us will gather in Espoo at CSC headquarters to learn together โค๏ธ

๐ŸŒ Watch the live stream at twitch.tv/coderefinery
๐Ÿ’ฌ Register to interact

Looking forward to another exciting and collaborative learning experience!

24.03.2025 19:50 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Preview
CodeRefinery workshop March 25-27 and April 1-3, 2025 Free workshop on git, testing, documentation, and more in a workshop - for researchers and scientists.

Social Coding: Code better, together

Coding isnโ€™t just a solo mission- great projects thrive on teamwork! ๐Ÿค

In our #SocialCoding session, youโ€™ll learn how to contribute and collaborate effectively, as well as what you need to know about licensing.

๐Ÿ“… Join us: coderefinery.github.io/2025-03-25-w...

21.03.2025 05:42 โ€” ๐Ÿ‘ 4    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

@samumantha is following 19 prominent accounts