Marie Held

It is a good listen/watch.

CBIAS napari workshop 2025

Want to enhance your image analysis skills with napari?

We’re running a two-day training event on how to use napari to effectively analyse your bioimaging data.

🕒 Applications close on 15 September.

Learn more and apply 👇

www.crick.ac.uk/whats-on/cbi...

Last chance saloon 🤠 to register for the hands-on 2-day napari training. Application deadline has been extended.
www.crick.ac.uk/whats-on/cbi...

CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopy - Nature Methods CLEM-Reg automates the three-dimensional alignment of volume correlative light and electron microscopy datasets by leveraging probabilistic point cloud registration techniques for fast and accurate re...

Super happy to see CLEM-Reg out in @natmethods.nature.com! A short thread on the algorithm behind it and how to try it out for yourself🧵(1/9)

www.nature.com/articles/s41...

CLEM-Reg automates the 3D alignment of volume correlative light and electron microscopy data.

www.nature.com/articles/s41...

Great news. Inclusive CBIAS all the way.

Home News Next BIA seminar series: "Behind the Scenes at SciLifeLab BIIF: Lessons from Managing a National Bioimage Analysis Support Unit" by Anna Klemm on 27th of August, 2pm CEST GloBIAS held its inaugu...

Next guest speaker at #CBIAS2025 is Christa Walther, community manager for @globias.bsky.social‬. GloBIAS is a worldwide association that brings together all those interested in #bioimageanalysis, offering opportunities for knowledge exchange, events, training, and resources.

🔗👇
www.globias.org

We continue the #CBIAS2025 speaker intros with @jytinevez.bsky.social, research engineer and core facility manager at the Institut Pasteur. Jean-Yves is one of the minds behind TrackMate and is part of F-BIAS, a federation of bioimage analysts across France

🔗👇
research.pasteur.fr/fr/member/je...

Last but not least for our #CBIAS2025 guest speaker line-up is Ilaria Testa, fellow at @scilifelab.se. Ilaria and team develop and apply novel super resolution microscopy approaches to understand fundamental biological processes relevant for health and disease

🔗👇
www.scilifelab.se/researchers/...

Applications close at the end of the week!

Crick BioImage Analysis Symposium 2025 Poster

The #CBIAS2025 abstract deadline is this Sunday, August 31st. Submit your #BioImageAnalysis work, whether it’s a new tool or a biological discovery. #EarlyCareerResearchers, this is for you! Short and flash talk slots are up for grabs.

www.crick.ac.uk/whats-on/cri...

At #CBIAS2025 we will also hear from Ewa Paluch from @cam.ac.uk. Ewa and their team take an interdisciplinary approach combining biology, imaging, mechanical testing and physical modelling to investigate the basic principles underlying animal cell morphogenesis

🔗👇
www.pdn.cam.ac.uk/directory/ew...

We continue the #CBIAS2025 speaker line-up with Dominik Kutra, senior research software engineer in the @ilastik-team.bsky.social. Dominik is one of the core developers of Ilastik, a user-friendly software that leverages machine learning algorithms to easily analyse bioimages

🔗👇
www.ilastik.org

Image quality metrics fail to accurately represent biological information in fluorescence microscopy Image processing methods offer the potential to improve the quality of fluorescence microscopy data, allowing for image acquisition at lower, less phototoxic illumination doses. The training and evalu...

Hello! Very excited to share our latest preprint, which is great news for us but terrible news for any diehard fans of PSNR and SSIM as image quality metrics in microscopy... (1/5)
www.biorxiv.org/content/10.1...

Next up at #CBIAS2025 is @helenajambor.bsky.social‬ from the University of Applied Sciences of the Grisons. Helena researches data visualisation in the life sciences, combining their expertise with large datasets and their interest in data communication

🔗👇
helenajamborwrites.netlify.app/about

Our first #CBIAS2025 invited speaker is Andrew French from @uniofnottingham.bsky.social‬, who specialises in using AI to understand images. Their research interests include image analysis of plants and complex structures and image capture automation

🔗👇
www.nottingham.ac.uk/biosciences/...

The line-up for guest speakers at #CBIAS2025 is looking great! 🎉

We'll introduce them to you in the coming days, on the lead up to the deadline for abstract submission on August 31st.

If you want a sneak peek in the meantime, check our website!
www.crick.ac.uk/whats-on/cri...

🚨🚨🚨🚨 Don’t leave it too late to submit an abstract to #CBIAS2025 Tell us what you’re up to. 🚨🚨🚨🚨

Abstract submission #CBIAS2025 is closing on August 31st - we invite submissions on all topics related to #bioimageanalysis: new tools, biological discoveries using existing methods, and anything in between. Early-career researchers especially encouraged to submit!

www.crick.ac.uk/whats-on/cri...

I am stunned!
First edition of the "Bio-Imaging with Shakespeare" LinkedIn Newsletter (buff.ly/8x7Shiq) is out for 15h and already 130 subscribers.

If you are interested in the topic FOLLOW ME on LinkedIn and Bsky and SUBSCRIBE
on LinkedIn buff.ly/cLPh8eZ

#bioimageanalysis #biovoxxel #fiji

The UK Node of Euro-BioImaging

𝐑𝐞𝐚𝐝 𝐭𝐡𝐞 𝐟𝐮𝐥𝐥 𝐚𝐫𝐭𝐢𝐜𝐥𝐞 𝐡𝐞𝐫𝐞:
www.rms.org.uk/community/ne...

CBIAS napari workshop 2025

📢 After #CBIAS2025, join our hands-on 2-day napari training by @crick.ac.uk @ucl.ac.uk @liverpooluni.bsky.social
From conda to plugins to Jupyter, practicals on real data with expert guidance.
For Python/ImageJ coders. Apply by 1 Sept – limited to 30! crick.ac.uk/whats-on/cbias-napari-workshop-2025

www.zingst.de/konzert/somm...

Ready to automate your #microscopy #imageanalysis tasks? Applications are now open for our next "Introduction to Image Analysis" training course, in London at the @crick.ac.uk on October 27th-28th, 2025! 🔬💻

More info ⬇️
www.crick.ac.uk/whats-on/int...

Ahhhhhhhh

Long awaited annual leave commencing

Registrations now open and free!!
lnkd.in/gBQcrjda

GloBIAS: strengthening the foundations of BioImage Analysis There is a global need for BioImage Analysis (BIA) as advances in life sciences increasingly rely on cutting-edge imaging systems that have dramatically expanded the complexity and dimensionality of b...

@kbias.bsky.social, @pmsampaio.bsky.social, @tischi.bsky.social, Rocco D'Antuono, ‪and @haesleinhuepf.bsky.social
‬ did a great job of pulling the data together, to describe who we are, where we want to get, and how we get there together. Check out the preprint and join us today! (5/5)