Nico Mongiardino Koch's Avatar

Nico Mongiardino Koch

@nmkphylo.bsky.social

In exile, at home ๐Ÿ‡ฆ๐Ÿ‡ท. Deep-time evolutionary biology, from genomes to fossils https://www.nmkphylo.com/

219 Followers  |  371 Following  |  57 Posts  |  Joined: 17.09.2023  |  2.0906

Latest posts by nmkphylo.bsky.social on Bluesky

Weirdly enough, that skull seems to be from Aenigmatorhynchus and corresponds to a paper published last June (doi.org/10.1098/rsos...). The journal seems to collect potential cover images from authors and then use them for an unrelated volume published later on

11.02.2026 16:10 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Phylogenomics of extant Crinoidea (Echinodermata) reveals extensive morphological homoplasies and a Permian origin Abstract. Crinoids have Ordovician origins and are unique among living echinoderms in their attachment to the substrate. Most diversity is within Comatulid

When I started my PhD ~10 years ago, only 2/5 echinoderm groups (the star-shaped sea stars and brittle stars) had genome-scale phylogenetic datasets. I am proud to say that the quest to complete the clade is now over

doi.org/10.1098/rsos...

11.02.2026 10:58 โ€” ๐Ÿ‘ 29    ๐Ÿ” 14    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 0
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Becoming a part of the @systbiol.bsky.social community is one of my greatest scientific achievements. I am happy to celebrate this today with a journal cover and a nomination to the editorial team

19.01.2026 23:46 โ€” ๐Ÿ‘ 14    ๐Ÿ” 4    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Spring is here

11.10.2025 17:52 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Evolutionary rate incongruences in squamates reveal contrasting patterns of evolutionary novelties and innovation Abstract. Understanding the rate of phenotypic evolution can reveal fundamental aspects of organismal evolutionary trajectories. Hence, several studies hav

Our latest paper, now how to conciliate apparently discrepant evolutionary rate patterns in squamates, but which may well apply to any study system with Stephanie Pierce and
@7brumas.bsky.social
#macroevolution

academic.oup.com/sysbio/advan...

28.09.2025 00:06 โ€” ๐Ÿ‘ 25    ๐Ÿ” 13    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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I am extremely happy to see that our review on fossil tip-dating is out in early view in Systematic Biology! A huge thanks to all the authors of this massive project (@heckeberg.bsky.social, @basantakhakurel.bsky.social, Gustavo Darlim, and @hoehna.bsky.social)! academic.oup.com/sysbio/advan...

25.09.2025 12:40 โ€” ๐Ÿ‘ 53    ๐Ÿ” 38    ๐Ÿ’ฌ 3    ๐Ÿ“Œ 2

Seeing these after laying down the first volume of Fabreโ€™s Souvenirs entomologiques, devoted to the rearing behavior of predatory wasps, was a treat. Thanks for sharing Marshall!

23.09.2025 01:38 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

I use it all the time, along with mean()

19.09.2025 21:32 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
Flyer for the next instalment of the Palaeoverse Lecture Series. The flyer features a yellow cartoon trilobite, and pictures of Drs. Mongiardino Koch and Garwood. Mongiardino Koch wears a grey t-shirt and glasses, while Garwood wears a white shirt and is holding a glass trophy.

Flyer for the next instalment of the Palaeoverse Lecture Series. The flyer features a yellow cartoon trilobite, and pictures of Drs. Mongiardino Koch and Garwood. Mongiardino Koch wears a grey t-shirt and glasses, while Garwood wears a white shirt and is holding a glass trophy.

๐ŸšจPalaeoverse Lecture Series๐Ÿšจ
๐Ÿ—“๏ธ25th September 2025, 15:00 UTC๐Ÿ—“๏ธ

Join us next week to hear from @nmkphylo.bsky.social and @russellgarwood.co.uk, on โ€œThe Tree of Life and Death: What do Fossil Taxa Contribute to Morphological Phylogenetics?โ€ ๐ŸŒณ๐Ÿฃโšฐ๏ธ

Register here: bit.ly/palaeoverse-...

19.09.2025 10:18 โ€” ๐Ÿ‘ 9    ๐Ÿ” 8    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1

Today I learned the (very) hard way that R will tell you a file does not exist even when it totally does if the path to it exceeds 260 characters

(in Windows)

(and you can enable long paths, but it is not the default)

18.09.2025 01:29 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

I will forever despise whoever named some closely related echinoid genera with a name starting with โ€œPaleoโ€ and others with a name starting with โ€œPalaeoโ€

15.07.2025 19:57 โ€” ๐Ÿ‘ 4    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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A Sunday reading Fabreโ€™s โ€œSouvenirs entomologiquesโ€ by the fireplace is a Sunday well spent

29.06.2025 15:58 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Actually, I got it wrong, it is -3. I was going with alternating between subtracting -2 - (i - 1)/2 and adding 1, where i is the iteration

26.06.2025 17:06 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Following the sequence would make state 5 = -4 median eyes

25.06.2025 17:23 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

A student once asked me why wasnโ€™t I using which.min(x) instead of which(x == min(x)) and I pretended it was for pedagogical purposes

12.06.2025 00:54 โ€” ๐Ÿ‘ 5    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Congratulations James! Thatโ€™s outstanding

11.06.2025 21:21 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

And this breakthrough required only.. how many months in Berlin??

06.06.2025 00:21 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
A flyer for the Palaeoverse Lecture Series for Summer 2025
June 26th - Dr Katie Collins, Natural History Museum
โ€œBoth round and upward: Spiral morphometry and how to compare things that are the same, but differentโ€
July 31st - Summer break
August 28th - Amy Shipley, University of Leeds
โ€œModelling ancient food webs: ecosystem changes across the Pliocene marine megafaunal extinctionโ€
September 25th - Dr Nicolรกs Mongiardino Koch, UC San Diego and Dr Russell Garwood, University of Manchester
โ€œThe Tree of Life and Death: What do fossil taxa contribute to morphological phylogenetics?โ€

A flyer for the Palaeoverse Lecture Series for Summer 2025 June 26th - Dr Katie Collins, Natural History Museum โ€œBoth round and upward: Spiral morphometry and how to compare things that are the same, but differentโ€ July 31st - Summer break August 28th - Amy Shipley, University of Leeds โ€œModelling ancient food webs: ecosystem changes across the Pliocene marine megafaunal extinctionโ€ September 25th - Dr Nicolรกs Mongiardino Koch, UC San Diego and Dr Russell Garwood, University of Manchester โ€œThe Tree of Life and Death: What do fossil taxa contribute to morphological phylogenetics?โ€

๐ŸšจPalaeoverse Lecture Series๐Ÿšจ

Itโ€™s time to announce our Summer 2025 talk schedule ๐Ÿ‘€
Looking forward to hearing from @spissatella.bsky.social, @sauropodlets.bsky.social, @nmkphylo.bsky.social and @russellgarwood.co.uk!

Sign up here: bit.ly/palaeoverse-lecture-series-2025

04.06.2025 10:20 โ€” ๐Ÿ‘ 20    ๐Ÿ” 17    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2

Yeah, it is true that the result deviates from the expectations of ordering variables/observations. If the matrix format that sapply outputs isnโ€™t convenient you can use lapply instead, or you can just transpose it

22.05.2025 00:31 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

I think this is because you are not supposed to use sapply on matrices. If you do it probably gets coerced into a data.frame, whose elements are the columns.

Anyways, not long ago I discovered asplit() which is pretty handy when needing the flexibility to work across either margin

21.05.2025 23:55 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Sleep Token is horny metal?? ๐Ÿ˜† @brenenwynd.bsky.social what are your thoughts on this?

09.05.2025 16:01 โ€” ๐Ÿ‘ 2    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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a cartoon skeleton wearing a police uniform and tie ALT: a cartoon skeleton wearing a police uniform and tie
02.05.2025 02:25 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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Redefining music 25 years after your debut album is something that was probably done only once

02.05.2025 00:25 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

๐Ÿ“ข Tired of choosing between fossils to incorporate into your phylogenetic analysis? Us too.
๐Ÿ’ฅ Check out our new preprint on incorporating stratigraphic ranges into the FBD model, implemented in BEAST2. We explore how using ranges affects the inference of dog ๐Ÿถ and penguin ๐Ÿง trees ๐ŸŒณ

24.04.2025 08:57 โ€” ๐Ÿ‘ 38    ๐Ÿ” 21    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1

Sheโ€™s never worn fake eyelashes in her whole life

23.04.2025 20:30 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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I'm recruiting a PhD student to join my lab at the University of New Orleans starting in Fall 2025. Research topics will focus on building and using phylogenies to study the diversification of birds, with an emphasis on Neotropical bird radiations. Contact me if interested.

16.11.2024 02:38 โ€” ๐Ÿ‘ 66    ๐Ÿ” 58    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Great news!! Congrats ๐Ÿฅณ

14.04.2025 23:26 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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A Jurassic acanthocephalan illuminates the origin of thorny-headed worms - Nature An acanthocephalan body fossil, Juracanthocephalus daohugouensis, is described from the Middle Jurassic Daohugou biota of China, showing previously unrecognized diversity in ancient Acanthocephal...

I finally have something worth posting here! A new paper on wormsI never expected to see fossilised! Juracanthocephalus is the first body fossil of Acanthocephala and remarkably provides links with rotifers and other gnathiferans.

Published in @nature.com
www.nature.com/articles/s41...

09.04.2025 20:33 โ€” ๐Ÿ‘ 73    ๐Ÿ” 21    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 1
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The Malvinas War erupted 43 years ago. Its memory remains to this day alive in every corner

01.04.2025 23:41 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Ahh the smell of fresh reviews in the morning

28.03.2025 12:37 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

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