David Broadhurst

Version 2.1 of the QC:MXP repeat-injection derived batch correction app is now available to download at qcmxp.org.
I thought it would be fun to revisit an old data set from Craig Wheelock's lab - doi.org/10.1183/1399....
16 batch, 880 subjects, 224 pooled QC injections, 100+ curated metabolites.

homer simpson from the simpsons is sitting in a chair with his mouth open and his hands outstretched . ALT: homer simpson from the simpsons is sitting in a chair with his mouth open and his hands outstretched .

OMG! Calamansi & Lime in spiced rum!

For the love of god put the sample size in the abstract

I am very proud to announce the 2nd Philippine Metabolomics Network Annual Conference.

This is a free 1-day conference in Manila to boost metabolomics in the country.

Includes workshops on Metabolomics QC by @davidbroadhurst.bsky.social and GNPS by Wout Bittremieux

UGent Global Minds Fund

🚨 📢 I’m #hiring!!! I am looking for an experienced #metabolomics scientist with a particular focus on LC-MS. Please follow the link below for more details and how to apply! 📢 🚨
Applications close at 23:59 on May 23rd!!!

www.crick.ac.uk/careers-stud...

Happy to share our recent opinon piece on how the cross section of ageing, metabolism and palaeoanthropolgy research areas hold promise is uncovering novel routes in human evolution.

authors.elsevier.com/a/1k%7E4KArD...

Save the date: the 5th anniversary of the Glasgow Computational Biology Conference. 15th and 16th of September at University of Glasgow Advanced Research Centre. Details to follow soon!
glasgow-compbio.github.io/conference/2...

QC:MXP version 2.0 is now available to download for free from my GitHub page: www.qcmxp.org
Repeat-injection-based Quality Control, Batch Correction, Exploration & Data Cleaning. #Metabolomics #AnalyticalChemistry #Matlab

Updates in 🦕 #xcms #rstats #metabolomics package:

👉 retention time alignment against external data set
👉 chromatographic peak quality metrics
👉 performance improvements

Available in @bioconductor.bsky.social release 3.21 🚀

Up next: memory-saving analysis of very large data sets 😎

#TeamMassSpec

It is a standalone app (i.e. compiled for Windows or OSX using App Designer) using Matlab 2025a runtime library. So, no there are no problems with the new version of Matlab.

QC:MXP version 2.0 is now available to download for free from my GitHub page: www.qcmxp.org
Repeat-injection-based Quality Control, Batch Correction, Exploration & Data Cleaning. #Metabolomics #AnalyticalChemistry #Matlab

And big thanks also to the @eubic-ms.org hackathon team contributing to our #SpectriPy package github.com/RforMassSpec... !

Next on the list submission of the package to 👉 @bioconductor.bsky.social

Thanks Katherine. They are now on the list.

Very Nice!

Well that was an eye opening and depressing read. Hard to be very positive about anything at the moment.

Thanks Doug. Now I have to buy a book to read the punchline. 🙄

A roadmap to precision medicine through post-genomic electronic medical records - Nature Communications The authors outline a framework uniting electronic medical records with post-genomic data to capture real-time physiological changes via periodic molecular snapshots, enabling a shift from reactive tr...

Wonderful to see this Nature Communications perspective paper from Dr. Kevin Mendez's PhD finally out. Part of great collaboration between metabolomic epidemiology researchers at Edith Cowan University & Harvard Medical School. www.nature.com/articles/s41...

🚨 Abstract deadline alert! 🚨

Friendly reminder to submit your oral abstract before March 6 – don’t miss the chance to showcase your work at hashtag#MetSoc2025!

Registration is now open: lnkd.in/eFZGi4CK

#Metabolomics #EMN

We will be hosting the first @mzmine.bsky.social Community Meeting at @iocbprague.bsky.social. Please register if you wish to learn about the latest developments in mzmine. More info: docs.google.com/document/d/1...

🚨 Call for abstracts! 🚨
Submit your abstract for #MetSoc2025 in Prague - submissions close March 6! Don't miss the chance to showcase your work at the biggest event in #metabolomics.

www.metabolomics2025.org

I'm really looking forward to running this "Git and GitHub for R Users" workshop for @r-ladies-stl.bsky.social!

📅 April 23rd 2025
⏰ 11am CST / 5pm BST
📍 Online

Register: www.meetup.com/rladies-st-l...

#RStats #Git #GitHub #RLadies

Applications are open for the #FeMS+ 2025 Q2 Empowerment Awards! Thanks @brukercorporation.bsky.social for sponsoring!
Apply here: airtable.com/appyGufCIumj...
#TeamMAssSpec #WomenEmpowerment

Best of luck! Sounds like a fantastic research plan. 🤞

🏆EMN Travel Awards are back for #MetSoc2025 in Prague!

EMN Travel Award – Up to 4 grants for graduate (Master’s/PhD) & postdocs.

📍More info: metabolomics2025.org/awards

#Metabolomics #EMN

@tomgauld.bsky.social - I thought this was terrific!

The proteome content of blood clots observed under different conditions: successful role in predicting clot amyloid(ogenicity) A recent analysis compared the proteome of (i) blood clots seen in two diseases – sepsis and long COVID – when blood was known to have clotted into an amyloid microclot form (as judged by staining wit...

Pleased to say that the follow-up paper w @resiapretorius on the proteomics of amyloidogenesis in microclot formation preprinted at www.biorxiv.org/content/10.1... has just been accepted. #TeamClots

Come work at the European Molecular Biology Laboratory in the beautiful science & university city Heidelberg as a Research Software Engineer on R/Bioconductor tools for biological data science and AI !

embl.wd103.myworkdayjobs.com/EMBL/job/Hei...

LIST “WOMEN IN METABOLOMICS, LIPIDOMICS, PROTEOMICS AND RELATED DATA SCIENCE” NAME INSTITUTION COUNTRY Dr. Maria Eugenia Monge CIBION-CONICET Argentina Prof. Elaine Holmes Murdoch University- Imperial College London Australia- UK Dr Ruey-Leng Loo Murdoch University, Au...

I did a list of #WomeinSTEM working in #metabolomics & #lipidomics and #datascience please join or share with others, use it for conferences, media & networking, mentoring, supporting, anything that helps, 300+ women have joined
docs.google.com/document/u/0...

Ready to take your metabolite annotation to the next level?

Join our first FREE webinar on Best Practices for Metabolite Annotation in Imaging MS with METASPACE!

🔗 Register now: eventbrite.com/e/best-pract...

#Metabolomics #MassSpec #Imaging #METASPACE

Hi all, our lab will soon recruit a PhD student working within a very exciting MSCA Horizon Doctoral network working on ageing, UNION, which gathers some fantastic scientists. Please apply if your profile fits our project (see attached advert).
Looking forward to working with you!