Tim Vogels

Tim Vogels

@tpvogels.bsky.social

Boutique Neurotheory & Snazz Compneuro at IST Austria

2,625 Followers 752 Following 76 Posts Joined Nov 2023
1 week ago
YouTube
Nothing Compares to Vogel’s. YouTube video by Vogel's NZ

youtu.be/QFUz4RFUy8Q?...

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1 month ago
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Most of us are familiar with the nightingale's song, but did you know there's more to it than just a melody?

Read more: doi.org/10.1016/j.cu...

@danielavallentin.bsky.social @tpvogels.bsky.social @mpiforbi.bsky.social

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1 month ago

This paper shows alignment between LLMs and brain data is outperformed by a null model. More evidence for the argument I've been making in talks lately that we shouldn't believe any computational paper that puts less effort into null than main model.

www.biorxiv.org/content/10.1...

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1 month ago

This is such a cool idea! Not long term "networks" of young profs that create and cement in in-groups and out-groups, but summer schools, tailored to the acute needs of the young PI. Transient, but tailored, tidal and totally timeous, too. Terrific. Try today!

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1 month ago
YouTube
Nothing Compares to Vogel’s. YouTube video by Vogel's NZ

youtu.be/QFUz4RFUy8Q?...

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1 month ago
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Interplay between syllable duration and pitch during whistle matching in wild nightingales During complex vocal interactions, different features of acoustic stimuli are integrated to produce appropriate vocal responses,1 such as copying soun…

...in which @danielavallentin.bsky.social shows: vogels match rivals’ whistles, imitating pitch + duration. W'sm, a vogelsmodel model reveals hierarchical organisation of vogelsongs: Duration constrains pitch, a trade-off. Not all vogels, just nightingales.
www.sciencedirect.com/science/arti...

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1 month ago

Deadline for poster submissions in Jan 27!! That totally escaped me!

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3 months ago

Excited to see the paper fully published. It's an important milestone for training SNNs with exact gradients, replacing our earlier tricks of a "delay line augmentation" to capture temporal relationships. Delays can now be learnt alongside weights naturally. Amazing work @mbalazs98.bsky.social !

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3 months ago

The only solace (in hindsight) is that I wouldn't have wanted to have worked in that f__ed up place, anyway. :P And so don't my peops, respectively, in future hindsight, probably, ....but in the moment, WHY?

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3 months ago

13 yrs ago some crusty prof asked me if I were "able to teach quantum chromo dynamics" during a faculty interview, as a means to disqualify me (his preferred candidate got the job, surprise!). These days, I am subjugated vicariously, when my postdocs experience the same BS. WTAF. So infuriating.

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3 months ago
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Last of my fave books back on a shelf, after 5 years in a box. I wouldn’t have thought it takes a full grant cycle to move but here we are. And there’s still more boxes. Of garbage. Mostly. But could not be happier to have the books back

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3 months ago
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Inhibitory Plasticity Balances Excitation and Inhibition in Sensory Pathways and Memory Networks Plasticity at inhibitory synapses maintains balanced excitatory and inhibitory synaptic inputs at cortical neurons.

"Spiking Networks Hate It! Find Out the One Plasticity Trick They Don’t Want You to Know! Never stabilise models by hand again." - I woke up thinking we missed an opportunity with the title of this one. :/ www.science.org/doi/10.1126/... Also: It snowed in Vienna, 10cm white fluffies! Happy Sunday!

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3 months ago

...and when I say @worldwideneuro.bsky.social, I really mean @bozelosp.bsky.social, obvs. Also, ...there is an all new front end for worldwideneuro coming soon. Stay tuned!

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3 months ago
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The State of Neuroscience 2025 The Transmitter presents a portrait of the field through four lenses: its focus, its output, its people and its funding.

Here is the product of a collab between @thetransmitter.bsky.social, @worldwideneuro.bsky.social & @moritzstefaner.bsky.social A portrait of the #StateofNeuro 2025: Text mining of (publicly available) neuro resources: Easy in concept, tricky in realisation, made possible by @simonsfoundation.org 🙏

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3 months ago

I am very busy. I only post when it's urgent. Also I didn't know there was a weekly quota. Can I have this one count for next week?

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3 months ago

Too late. He does not accept your apology.

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4 months ago
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I just found this stub in a jacket that I guess I have not worn in twenty three years? 12 bucks for Lali Puna, sweat and spit and all, at the (tiny) Middle East downstairs on Mass Ave. Those were the days. So so good.

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5 months ago

Maybe check out the associated website. icg-explorer.org. I know I know, it's not fully integrated with ICG1, but these things are difficult.

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5 months ago

Congratulations Juan! Exciting news!

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5 months ago
Ion Channel Genealogy Visualizer Interactive visualization and analysis of ion channel models from ModelDB and ICG databases

...which is to say, maybe peops *use* the paper and page, but forget to cite, 'cuz it's so early in the scientific process? Anyway, the old & *new* work, in which we compare the line-by-line code tons of models, & rewrite them in a unified expression makes me so happy. Check it out: icg-explorer.org

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5 months ago

Some addendum here. The '17 elife paper only has 43 citations in 8 years :( but the associated ionchannelmodels.org had 900+ unique visitors in 2024. Some 180 of them used the "compare ion channel models" function, pretty deep into the page. Every two days someone used a service we didn't advertise!

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5 months ago
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What Americans Die from?

And what the media reports on...

Our World in Data ourworldindata.org/does-the-new...

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5 months ago

The working title of this project was “super models”, but we chickened out in carrying that terminology through. We were worried anyone was gonna think we were making fun of human supermodels, or worse, ion channels!! And we weren’t sure blue steel was the right association for a CA++ channel…

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5 months ago
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An ion channel omnimodel for standardized biophysical neuron modelling Biophysical neuron modeling is an indispensable tool in neuroscience research, with the combination of diverse ion channel kinetics and morphologies being used to explain various single-neuron propert...

“Mapping ion channel function” doi.org/10.7554/eLif... isn’t exactly a citation slayer, but it’s still one of my favourites (& my first independent project). Today we push pt 2, where we trace code origin & unite almost all channel models in a common expression. Boom! www.biorxiv.org/content/10.1...

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5 months ago
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SNCF's half hearted effort to support international night trains in danger of hitting the buffers - Jon Worth In December 2023 the Paris-Berlin night train re-started after a 9 year hiatus. Operated as a Nighjet service by ÖBB, SNCF provided motive power for the train from Mannheim to Paris. They even put SNC...

No more Paris-Wien/Berlin night trains

"Die ÖBB bedauern, dass nach dem Rückzug der französischen Partner, die beiden Nachtzugverbindungen ab 14. Dez 2025 nicht mehr angeboten werden können." - SNCF, this is you presse-oebb.at/news-oebb-be...

My analysis in English:
jonworth.eu/sncfs-half-h...

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5 months ago

"How many disco balls have you purchased in your life time?"

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6 months ago
ALT text: A UMAP representation of a single cell RNAseq dataset from the Drosophila ventral nerve cord as well as images of the Drosophila nerve cord connectome and different stages of fly development.

Neuronal diversity is written in transcriptional codes 🧬. But what is the logic of these codes that define cell types and wiring patterns?
To find out we built a #scRNAseq developmental atlas of the Drosophila nerve cord and linked it to the #connectome 🪰🧠
#preprint thread ⬇️1/8

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6 months ago
Revealed: Israeli military’s own data indicates civilian death rate of 83% in Gaza war Figures from classified IDF database listed 8,900 named fighters as dead or probably dead in May, as overall death toll reached 53,000

www.theguardian.com/world/ng-int...

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6 months ago
Distinct theta signatures of involuntary and voluntary memory retrieval. A. Left, top: time course of theta power in significant electrodes. T-sum values above zero indicate significant time points. Left, bottom: time-frequency plot of theta-band activity as mean across all significant electrodes. Time-frequency plots are only displayed for illustrative purposes and were not used for inference statistics. Right: topographical plot of significant electrode clusters. Significant electrodes are highlighted as bold dots. B. Source localization of significant theta-band cluster and bar plot depicting mean theta-power of full-hits (FH) and correct rejections (CR) within source localized clusters. C. Corresponding time-frequency analysis for voluntary retrieval. D. Source localization of significant theta-band clusters during voluntary retrieval and bar plots illustrating mean theta-power of full-hits and correct rejections within source localized clusters.

Involuntary memory retrieval is a common phenomenon in autobiographical #memory, and a symptom of #PTSD. This study reveals the neural mechanism of #InvoluntaryMemory, showing that involuntary & voluntary memories rely on distinct neural processes @plosbiology.org 🧪 plos.io/4oQkb3e

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7 months ago
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LHSC names 5 former executives in $60M fraud lawsuits LHSC contends a former executive masterminded a "fraudulent scheme" and he and others used funds they obtained to buy properties

Almost every major university financial fraud is done by administrators...yet note the difference between the comically instrusive surveillance and accountability for faculty over every dollar vs the complete lack of oversight for management spending (or stealing).

lfpress.com/news/local-n...

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