Client Challenge
Publication alert! ๐ฃ๐
Happy to share this new work in collaboration with @dvm-uvm.bsky.social:
Distinct Food Web Responses to Environmental Gradients Suggest Different Effects of Invasive Species in a Large, Fragmented Lake ๐๐๐ฟ
Check it here: rdcu.be/eYVky
doi: doi.org/10.1007/s100...
13.01.2026 21:38 โ ๐ 4 ๐ 2 ๐ฌ 0 ๐ 0
I hope these models serve as inspiration for laboratory/field work focused on animal pursuit. Additionally, I hope to demonstrate some of the power of BBE models and EAs, which have a rich history in artificial life and cognitive science, to biologists and ecologists.
9/9
30.12.2025 15:36 โ ๐ 1 ๐ 0 ๐ฌ 0 ๐ 0
CTRNNs are amenable to dynamical systems analysis. Three mechanisms generated saltatory movement during pursuit, either the excitation/inhibition of movement by target signal or repeated sampling by tactile foragers. The period of saltatory movement changed according to distance to the target.
8/N
30.12.2025 15:33 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0
EAs provide synthetic datasets to explore populations of solutions to a given task. In this case, saltatory (stop-and-go) movement frequently mediated pursuit behavior. Saltatory movement is one of the most common movement strategies in search, but less commonly discussed outside search.
7/N
30.12.2025 15:31 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
I employed evolutionary algorithms (EAs) to generate a variety of possible solutions in each pursuit task. I allowed the EA to access small neural networks (CTRNNs) in each forager. This approach is often used in models of brain-body-environment (BBE) systems.
6/N
30.12.2025 15:29 โ ๐ 1 ๐ 0 ๐ฌ 1 ๐ 0
I wanted to know how different perceptual modalities and prey behaviors could shape pursuit behavior. As such, I modeled movement strategies in pursuit of stationary targets, varying both forager perceptual modality (continuous โvisualโ v. movement-based โtactileโ) and target reliability (+/-).
5/N
30.12.2025 15:28 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
Additionally, almost all prey animals are cryptic in some way. Many exhibit behavioral crypsis, which may limit a foragerโs ability to pursue that prey animal. This is true of mobile and sessile prey animals alike, the latter especially well represented by embryonic behavior in eggs.
4/N
30.12.2025 15:27 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
In many cases, an encounter with a target does not imply its capture (โsoftโ encounters). Soft encounters are often represented by parameters that denote capture success. However, capture success depends on movement strategies contingent on perceptual apparatus, physiology, and environment.
3/N
30.12.2025 15:27 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
A majority of animal movement models focus on search and encounters, or how animals move through an environment to find what they are looking for. Movement strategies post-encounter (e.g., during pursuit of an encountered target) are less well understood.
2/N
30.12.2025 15:24 โ ๐ 0 ๐ 0 ๐ฌ 1 ๐ 0
Now published, our paper on evolved movement strategies in the pursuit of targets with different perceptual modalities of a foraging animal and varying target signal reliability! ๐งช๐ฆ
Available open access in Movement Ecology.
Link: rdcu.be/eWOM9
1/N
30.12.2025 15:23 โ ๐ 4 ๐ 0 ๐ฌ 1 ๐ 0
A schematic of a death event in a multicellular system, where the loss of one cell results in a collapse in the dimensionality of the system. Each cell's essential variables have their ranges capped by viability constraints.
Where does the life-death boundary come from, and how will a cell's dynamics unfold relative to it? Myself, Eran Agmon, and Randy Beer argue for a theory of cellular viability, with new global organizing principles for cell fate.
Preprint: arxiv.org/pdf/2511.07847
12.11.2025 18:36 โ ๐ 3 ๐ 1 ๐ฌ 0 ๐ 0
This image shows a six-panel comic by Kate Beaton, titled, โEvery Lady Scientist Who Ever Did Anything (until recently).โ
Panel 1: Rosalind Franklin being taunted by a grinning James Watson while with Francis Crick, saying, โOooh, whatโs that youโve got? Little Rosie Franklinโs research! I bet itโs something!โ Rosalind replies, โMy final report.โ
Panel 2: Franklin corrects Watson saying, โROSALIND.โ Crick retorts, โOh, thatโs a big name,โ and Watson says, โYouโre getting fancy on us! Tell me -โ
Panel 3: Rosalind deadpans, โAh. I love this game.โ Watson says, โIs it a scientific breakthrough in feelings?โ while Crick laughs
Panel 4: Rosalind, leaving the room, says, โWell, I suppose I have to go into hysterics or have a baby somewhere, good day gentlemenโ
Panel 5: Watson, hiding behind doorframe, watching Franklin walk almost out of sight, says, โGo, go,โ to Crick, who is grabbing a paper
Panel 6: Watson and Crick hold out a folder in front of their faces, showing their eyes and tips of their heads. Crick remarks, โNice,โ while Watson says to Crick, โQuit hoggingโ
always a good time to review this @katebeaton.bsky.social comic, gloriously entitled, โEvery Lady Scientist Who Ever Did Anything (until recently)โ ๐งช
07.11.2025 22:05 โ ๐ 89 ๐ 32 ๐ฌ 2 ๐ 0
Thanks to my co-authors Randall Beer and Peter Todd. Link to the published version to come!
03.11.2025 19:35 โ ๐ 0 ๐ 0 ๐ฌ 0 ๐ 0
Happy to say one of my dissertation projects was accepted for publication in Movement Ecology!
We evolved small neural controllers to show how forager perception (visual v. tactile) and target signals generate different movement patterns during pursuit.
Pre-print: www.biorxiv.org/content/10.1...
03.11.2025 19:33 โ ๐ 4 ๐ 1 ๐ฌ 1 ๐ 1
Scientist & skeptic. Dad. Book addict. Pathologically curious. Origins and Evolution of Complexity, Synthetic Transitions, Liquid Brains, and Earth Terraformation. ICREA, SFI & CSH professor. Author. Secular humanist.
Research & News from Stellenbosch University Biomathematics Group | Mathematical Ecology | Biodiversity Informatics | Network Evolution |
East Bay curmudgeon, plant and insect dilettante, sucker for a space ship.
Japan. miscellaneous ALife researcher https://lanasina.github.io/
Research @ Sony CSL, Associate Prof. National Institute for Basic Biology.
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Assistant Professor at UConn. Ecologist, math nerd, R monkey, plant lover, food enthusiast, parent.
Account for the Society for Modeling & Theory in Population Biology, a professional scientific society focused on mathematical models and theory-based research in population biology. Posts by Jennifer Foot.
smtpb.org
Population biologist and mathematician wrestling with the complexities of nature armed with the theories of stochastic processes and dynamical systems.
Dynamics of Ecological and Evolutionary Processes Lab https://schreiber.faculty.ucdavis.edu
Assistant Professor, UBC Zoology & Botany
Wildlife ecology, animal behaviour, predator-prey interactions, conservation
Assistant Prof at Indiana University (starting Jan 2026)
neuroethology | spiders | animal behavior | spiders | sensory systems | ALAN | art | spiders
Assistant Professor @ U of Guelph. Interested in coexistence, global change, experimental evolution, diversity in STEM, bagels. ๐ฟ๐ฆ๐๐ฉโ๐ฌ
Cartoonist and Illustrator. My book of science cartoons, PHYSICS FOR CATS, is available now! www.tomgauld.com
Neil Clarke: Editor of Clarkesworld Magazine, The Best Science Fiction of the Year series, and more. Four-time Hugo Award Winner for Best Editor Short Form. Four-time Chesley Award-winning art director.
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SF writer / computer programmer
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Latest collection: SLEEP AND THE SOUL
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Also: @gregeganSF@mathstodon.xyz
Mercenary Researcher For Hire.
ALIFE โ Embodied/Affective/Social Cognition โ AI โ HRI โ CogSci
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The premier research center for #ComplexSystems #science.
santafe.edu
linktr.ee/sfiscience
PopBio talks for the Asia-Pacific, not at midnight. A virtual seminar series covering research on population biology (community ecology, population genetics, experimental evolution, theoretical ecology etc.) on the last Thursday of every month at 1pm AEST.
Showcasing new research from the publishing portfolio of the Ecological Society of America, the world's largest community of ecologists @ecologicalsociety.bsky.social
The world's largest community of ecologists -- dedicated to understanding life on earth and fostering a thriving planet.
Find journals content at @esajournals.bsky.social.
Assistant Professor at Michigan State University studying eco-evolutionary dynamics in artificial life, cancer, and evolutionary computation. she/her ๐ณ๏ธโ๐
@emilydolson@ecoevo.social on Mastodon
Ecological networks & complex systems, Asst. Professor @ Florida Atlantic University, www.econet.works