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Jim Leebens-Mack

@jleebensmack.bsky.social

Botanist. University of Georgia. Plant evolutionary biology, phylogenomics, comparative genomics.

526 Followers  |  587 Following  |  21 Posts  |  Joined: 23.11.2024  |  2.1249

Latest posts by jleebensmack.bsky.social on Bluesky

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Frontiers | Utilizing target capture sequencing to resolve the speciation history of Echinacea (Asteraceae) It has been difficult to resolve relationships among many important lineages within the Asteraceae family due to interspecific hybridization and rapid specie...

Chazz Jordan's phylogenomic analysis of cone flowers (Echinacea) just published! - doi.org/10.3389/fpls.... Chazz's findings suggests rapid diversification in the genus as ancestral populations dispersed from southeastern North America into the midwest.

11.09.2025 19:17 โ€” ๐Ÿ‘ 6    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Two independent origins of XY sex chromosomes in Asparagus The relatively young and repeated evolutionary origins of dioecy (separate sexes) in flowering plants enable investigation of molecular dynamics occurring at the earliest stages of sex chromosome evol...

Analyses of a new genomes for garden asparagus and a Mediterranean basin congener reveal independent origins of dioecy and XY sex chromosomes. The work led by Phil Bentz @pbentz.bsky.social finds no overlap in the two Y-linked sex-determination genes - www.biorxiv.org/content/10.1... .

11.09.2025 14:26 โ€” ๐Ÿ‘ 19    ๐Ÿ” 9    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
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Our EEB department at the University of Illinois at Urbana-Champaign is hiring an assistant professor in evo-devo. See go.illinois.edu/EEBAsstProf for details. Please share!

26.08.2025 22:10 โ€” ๐Ÿ‘ 36    ๐Ÿ” 64    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 2
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๐ŸŒพThe Functional traits in primary producers: recent advances and future directions special feature is open for proposals!๐Ÿ„

๐ŸŒฒProposal submissions close 15 September, more details here: buff.ly/e8PTkMM

21.08.2025 10:15 โ€” ๐Ÿ‘ 9    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

IQ-Tree2 should run faster

21.08.2025 11:39 โ€” ๐Ÿ‘ 3    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

How long? What tree building tool are you using?

21.08.2025 11:38 โ€” ๐Ÿ‘ 0    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

#iamabotanist #herbarium #botany2025

20.08.2025 22:31 โ€” ๐Ÿ‘ 23    ๐Ÿ” 13    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

#iamabotanist #herbarium #botany2025

20.08.2025 22:30 โ€” ๐Ÿ‘ 12    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

On the cover of @natplants.nature.com this month:

@leobaumgart.bsky.social @greensi.bsky.social @abmora.bsky.social @omalley-regulome.bsky.social et al. map binding sites for 360 TFs across 10 ๐ŸŒฟplant๐ŸŒฟ species using a new multiDAP approach

Here is Sharon's explainer ๐Ÿงต:
bsky.app/profile/gree...

20.08.2025 00:45 โ€” ๐Ÿ‘ 29    ๐Ÿ” 6    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

๐Ÿคฆโ€โ™‚๏ธ

20.08.2025 00:04 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0

Awesome research with implications for understanding of transitions between CAM and C3 modes of photosynthesis in yaccas agaves and their relatives!

19.08.2025 22:56 โ€” ๐Ÿ‘ 12    ๐Ÿ” 2    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Lauren's defense poster with an ABBA-BABA site pattern diagram in the background, and photos of Neotropical bellflowers in the foreground. There's a picture of her to the left along with text: "Inferring hybridization at shallow and deep timescales. Lauren Frankel PhD dissertation defense. Monday, August 25 10:00am CDT"

Lauren's defense poster with an ABBA-BABA site pattern diagram in the background, and photos of Neotropical bellflowers in the foreground. There's a picture of her to the left along with text: "Inferring hybridization at shallow and deep timescales. Lauren Frankel PhD dissertation defense. Monday, August 25 10:00am CDT"

hi friends, let me know if you'd like a zoom link for my defense next week!

18.08.2025 18:54 โ€” ๐Ÿ‘ 49    ๐Ÿ” 10    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

I love this trend in polyploid research:

โ€œWith new data and techniques, we can finally tackle this horribly complicated group!โ€

โ€œAnd guess what? Itโ€™s even worse than we imagined!โ€

But seriously, excellent work!

13.08.2025 20:37 โ€” ๐Ÿ‘ 29    ๐Ÿ” 11    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0
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The Idiot's Guide to Effective Population Size This is a reference manual for the elegant, yet hideously complex concept of effective population size (Ne), inspired by a classic, self-published manual of automotive repair โ€˜for the compleat idiotโ€™...

Day 3 of popgen we talked about effective population size. No, I don't really understand it. You probably don't either. But I highly recommend this fantastic guide about how to think about Ne onlinelibrary.wiley.com/doi/10.1111/...

10.08.2025 17:19 โ€” ๐Ÿ‘ 85    ๐Ÿ” 22    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 0
Department of Botany and Plant Pathology at Oregon State University is hiring a Directory of the Herbarium

Department of Botany and Plant Pathology at Oregon State University is hiring a Directory of the Herbarium

The Department of Botany and Plant Pathology at Oregon State University is Hiring!

We are searching for a Director of the Oregon State University Herbarium and applications are welcomed at the ranks of assistant, associate, or full professor.

06.08.2025 16:58 โ€” ๐Ÿ‘ 84    ๐Ÿ” 106    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 5

Are you an early-career biologist or ecologist who would benefit from an invited seminar? Would you like to come to UMaine next fall or spring to give a talk? Leave a brief comment with some info about what you do. I'm co-hosting our seminar series again, and am filling out our rosters.

30.07.2025 19:37 โ€” ๐Ÿ‘ 229    ๐Ÿ” 174    ๐Ÿ’ฌ 53    ๐Ÿ“Œ 7
Open Positions

Herbarium director position opening at Oregon State University โ€ช@osu-herbarium.bsky.socialโ€ฌ Great opportunity for herbarium- and field-trained botanists at any rank. bpp.oregonstate.edu/bpp/about/op...

09.07.2025 14:53 โ€” ๐Ÿ‘ 49    ๐Ÿ” 58    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 1
Genetics Facilities Manager The University of Maine is a community of more than 11,900 undergraduate and graduate students, and 2,500 employees located on the Orono campus, the regional campus in Machias, and throughout the stat...

Come be my colleague (& @jacquelyngill.bsky.social's and other great folks)!

UMaine is hiring a Genetics Facilities Manager to lead the CORE eDNA and DNA Sequencing Labs. Hiring range is $75-85k (up $20k from previous round)

fa-ewca-saasfaprod1.fa.ocs.oraclecloud.com/hcmUI/Candid...

08.07.2025 16:15 โ€” ๐Ÿ‘ 12    ๐Ÿ” 16    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Some months later, work is now published @natcomms.nature.com www.nature.com/articles/s41...

05.07.2025 07:27 โ€” ๐Ÿ‘ 15    ๐Ÿ” 11    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

The Biodiversity Collections Task Force is a nascent effort to help collections through anticipated difficult times in the near future.

We are planning a webinar series, beginning in September 2025.

Let us know which topics would be most useful to you:
lnkd.in/gQmyMKmN

01.07.2025 21:42 โ€” ๐Ÿ‘ 7    ๐Ÿ” 3    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0

Let congress know that pro-growth = pro-science!

30.06.2025 03:51 โ€” ๐Ÿ‘ 1    ๐Ÿ” 0    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
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โ€˜This is bullโ€”โ€”โ€: National Science Foundation employees protest HUD's takeover Dozens of National Science Foundation employees crowded the agencyโ€™s headquarters in Alexandria, Virginia, Wednesday to protest the news that the Department of Housing and Urban Development, or HUD, w...

Another day testing the limits of resilience.

The Alexandria NSF building was designed for the NSF merit review process (gold standard), complete with a floor devoted to panels.

Now we arenโ€™t allowed to have in person panels.

The loss of US science leadership will haunt this country for decades.

25.06.2025 23:13 โ€” ๐Ÿ‘ 917    ๐Ÿ” 439    ๐Ÿ’ฌ 15    ๐Ÿ“Œ 38
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Karolina Heyduk: A Career Shaped by Desert Plants and Midnight Photosynthesis Botany One interviews Dr Karolina Heyduk, a plant evolutionary biologist interested in the origins a unique type of photosynthesis.

Check out this interview with BSA member and BSA Director at Large for Diversity, Equity, and Inclusion, Karolina Heyduk!

botany.one/2025/06/karo...

20.06.2025 21:05 โ€” ๐Ÿ‘ 66    ๐Ÿ” 23    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages | Joint Genome Institute Understanding the shared genetic toolkit of ancestral and present-day plants

The #OpenGreenGenomes Project, supported through our #CommunityScience Program, represents 35 major evolutionary plant lineages โ€” including M. polymorpha, or liverwort.

For decades it has been used as a model for evolutionary studies. ๐Ÿ–ฅ๏ธ๐Ÿงฌ๐ŸŒฑ

@jleebensmack.bsky.social @maximebonhomme.bsky.social

09.06.2025 17:15 โ€” ๐Ÿ‘ 11    ๐Ÿ” 5    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 1
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Plastids in a Pinch: Coordinating Stress and Developmental Responses Through Retrograde Signalling Plastids can sense environmental stress and improve whole plant adaptation through retrograde communication to the nucleus. Recent studies have advanced our understanding of integrated canonical and ...

Very happy to see this review by @elizavveen.bsky.social, Jesse Kรผpers and myself now out in Plant Cell & Environment! About how stresses impact chloroplasts, and how this can steer plant development via retrograde signaling ๐ŸŒฑ @pph-wur.bsky.social onlinelibrary.wiley.com/doi/10.1111/pce.15664

08.06.2025 17:40 โ€” ๐Ÿ‘ 25    ๐Ÿ” 15    ๐Ÿ’ฌ 2    ๐Ÿ“Œ 0

Call your congressional representatives and Senators!

31.05.2025 21:50 โ€” ๐Ÿ‘ 6    ๐Ÿ” 2    ๐Ÿ’ฌ 0    ๐Ÿ“Œ 0
NSF, NASA and NIH budgets per year, inflation adjusted from 2000-2025 along with the proposed cuts. NSF includes research component only. Massive cuts across all sectors, well below support spanning 25 years.

NSF, NASA and NIH budgets per year, inflation adjusted from 2000-2025 along with the proposed cuts. NSF includes research component only. Massive cuts across all sectors, well below support spanning 25 years.

How bad will it be? Catastrophic.

Proposed cuts to #NSF, #NIH, and #NASA will set the US R&D landscape back 25 yrs+, cause economic and job loss now, and undermine innovations to come.

But, this is the WH's *proposed* budget.

Speak up now before it is too late.

(inflation adjusted $-s below)

31.05.2025 02:50 โ€” ๐Ÿ‘ 2611    ๐Ÿ” 1373    ๐Ÿ’ฌ 71    ๐Ÿ“Œ 126
Tools to Take Action

Tools to Take Action

9/ ๐Ÿšจ๐Ÿšจ๐Ÿšจ CALL TO ACTION

Call your elective representatives to tell them how these draconian cuts will directly harm (as applicable):

your state
your local communities
your trainees
yourself

See the #SaveNSF website for some inspiration:

www.savensf.com/take-action

30.05.2025 23:15 โ€” ๐Ÿ‘ 28    ๐Ÿ” 26    ๐Ÿ’ฌ 1    ๐Ÿ“Œ 0
Senior Researchers 60,400 --> 16,900
Other Professionals 14,400  --> 4,100
Postdoctoral Associates 5,500  --> 1,000
Graduate Students 41,500  --> 12,400
Undergraduate Students 37,300  --> 8,000
PreK-12 Teachers 42,900  --> 8,200
PreK-12 Students 128,100  --> 39,400
Total Number of People 330,100  --> 90,000

Senior Researchers 60,400 --> 16,900 Other Professionals 14,400 --> 4,100 Postdoctoral Associates 5,500 --> 1,000 Graduate Students 41,500 --> 12,400 Undergraduate Students 37,300 --> 8,000 PreK-12 Teachers 42,900 --> 8,200 PreK-12 Students 128,100 --> 39,400 Total Number of People 330,100 --> 90,000

๐Ÿšจ๐Ÿšจ Friday night news drop from National Science Foundation!! ๐Ÿงช

NSF just released its detailed budget request for next year: nsf-gov-resources.nsf.gov/files/00-NSF...

We knew it was going to be bad...and it lives up. Guts direct NSF support for a **quarter million people**

๐Ÿงต on some highlights...

30.05.2025 23:15 โ€” ๐Ÿ‘ 164    ๐Ÿ” 155    ๐Ÿ’ฌ 4    ๐Ÿ“Œ 26

@jleebensmack is following 20 prominent accounts